Bug#613056: Please compile gmsh with support for .med files
Hi, all! I have a question regarding this package. 2.5.0.dfsg-6 version has the following line in control file[1]: libhdf5-mpi-dev[alpha amd64 i386 ia64 kfreebsd-amd64 kfreebsd-i386 powerpc sparc], As I understand, libhdf5-mpi-dev should be included only on platforms, listed above. But builldd includes this package for all platforms, causing FTBFS on some of them. For example, mips is not listed above, but buildd includes libhdf5-mpi-dev for building [2]: Get:112 http://mirror-ubc.debian.org/debian/ unstable/main libhdf5-mpi-dev mips 1.8.4-patch1-2 [18.3 kB] I have changed libhdf5-mpi-dev on libhdf5-openmpi-dev in build-deps [3]: libhdf5-openmpi-dev[alpha amd64 i386 ia64 kfreebsd-amd64 kfreebsd-i386 powerpc sparc] But I am afraid, that it will cause again FTBFS, because libhdf5-openmpi-dev is not available on all platforms. Can anybody say, what do I do wrong? Why buildd ignores platforms, like described in Debian Policy [4]? Thank you Anton [1] http://svn.debian.org/wsvn/debian-science/packages/gmsh/tags/2.5.0.dfsg-6/control [2] https://buildd.debian.org/status/fetch.php?pkg=gmsharch=mipsver=2.5.0.dfsg-6stamp=1302030827 [3] http://svn.debian.org/wsvn/debian-science/packages/gmsh/trunk/debian/control [4] http://www.debian.org/doc/debian-policy/ch-relationships.html -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#613056: Please compile gmsh with support for .med files
Seems, we have problems with compiling gmsh on some platforms: https://buildd.debian.org/build.cgi?pkg=gmshdist=sid I think, that the problem is in libhdf5-lam-dev package, which is used for those platforms and is uncompilable with gmsh. My opinion is, that we have to replace libhdf5-mpi-dev to the following line: libhdf5-openmpi-dev[alpha amd64 i386 ia64 kfreebsd-amd64 kfreebsd-i386 powerpc sparc] it will disable MED-support for some platforms, but will be compilable. A. -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#613056: Please compile gmsh with support for .med files
On Thu, 2011-03-31 at 00:16 +0200, Sylvestre Ledru wrote: Le mercredi 30 mars 2011 à 17:02 +0200, Anton Gladky a écrit : Please, have a look at rev.38287. Is it ok? Also libhdf5-openmpi-dev is not available for all platforms, will we not have problems with that? http://packages.debian.org/sid/libhdf5-openmpi-dev You are right. The correct package is mpi-default-dev here. Thanks! Compilation is started! I just recall that to enable med support the precense of libhdf5.so is mandatory... I think (but I may be wrong) that removing libhdf5-openmpi-dev will disable med support... :( I understand that libhdf5-openmpi-dev is not available for all platforms but it seems it exists for almost all platfomrs except m68k (unofficial port). To my point of view it is best to keep libhdf5-openmpi-dev to enable med support on most of the platforms and wait for libhdf5-openmpi-dev support for m68k... C. Sylvestre -- debian-science-maintainers mailing list debian-science-maintain...@lists.alioth.debian.org http://lists.alioth.debian.org/mailman/listinfo/debian-science-maintainers -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#613056: Please compile gmsh with support for .med files
What, if we do the following: libhdf5-openmpi-dev[alpha amd64 i386 ia64 kfreebsd-amd64 kfreebsd-i386 powerpc sparc], libhdf5-lam-dev[!alpha !amd64 !i386 !ia64 !kfreebsd-amd64 !kfreebsd-i386 !powerpc !sparc] It should work for most of platforms. But I am not sure, how to check it without uploading. Anton I just recall that to enable med support the precense of libhdf5.so is mandatory... I think (but I may be wrong) that removing libhdf5-openmpi-dev will disable med support... :( I understand that libhdf5-openmpi-dev is not available for all platforms but it seems it exists for almost all platfomrs except m68k (unofficial port). To my point of view it is best to keep libhdf5-openmpi-dev to enable med support on most of the platforms and wait for libhdf5-openmpi-dev support for m68k... C. -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#613056: Please compile gmsh with support for .med files
On Thu, 2011-03-31 at 09:25 +0200, Anton Gladky wrote: What, if we do the following: libhdf5-openmpi-dev[alpha amd64 i386 ia64 kfreebsd-amd64 kfreebsd-i386 powerpc sparc], libhdf5-lam-dev[!alpha !amd64 !i386 !ia64 !kfreebsd-amd64 !kfreebsd-i386 !powerpc !sparc] Could we do like in med-fichier use libhdf5-mpi-dev? It should work for most of platforms. But I am not sure, how to check it without uploading. Anton I just recall that to enable med support the precense of libhdf5.so is mandatory... I think (but I may be wrong) that removing libhdf5-openmpi-dev will disable med support... :( I understand that libhdf5-openmpi-dev is not available for all platforms but it seems it exists for almost all platfomrs except m68k (unofficial port). To my point of view it is best to keep libhdf5-openmpi-dev to enable med support on most of the platforms and wait for libhdf5-openmpi-dev support for m68k... C. -- debian-science-maintainers mailing list debian-science-maintain...@lists.alioth.debian.org http://lists.alioth.debian.org/mailman/listinfo/debian-science-maintainers -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#613056: Please compile gmsh with support for .med files
Could we do like in med-fichier use libhdf5-mpi-dev? I think med-fichier has also similar problems: http://bugs.debian.org/617729 A. -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#613056: Please compile gmsh with support for .med files
On Thu, 2011-03-31 at 09:52 +0200, Anton Gladky wrote: Could we do like in med-fichier use libhdf5-mpi-dev? I think med-fichier has also similar problems: http://bugs.debian.org/617729 For me this bugreport only means that libhdf5-mpi-dev should be installed alongside with libmed[c]-dev... so our problem is due to this bug! However if we want to go further I believe that we could add libhdf5-mpi-dev to fix med support in gmsh. Once the bug #617729 is closed we can think of removing libhdf5-mpi-dev from Build-Depends. What you think of my suggestion? A. -- debian-science-maintainers mailing list debian-science-maintain...@lists.alioth.debian.org http://lists.alioth.debian.org/mailman/listinfo/debian-science-maintainers -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#613056: Please compile gmsh with support for .med files
Le jeudi 31 mars 2011 à 09:21 +0200, trophime a écrit : On Thu, 2011-03-31 at 00:16 +0200, Sylvestre Ledru wrote: Le mercredi 30 mars 2011 à 17:02 +0200, Anton Gladky a écrit : Please, have a look at rev.38287. Is it ok? Also libhdf5-openmpi-dev is not available for all platforms, will we not have problems with that? http://packages.debian.org/sid/libhdf5-openmpi-dev You are right. The correct package is mpi-default-dev here. Thanks! Compilation is started! I just recall that to enable med support the precense of libhdf5.so is mandatory... I think (but I may be wrong) that removing libhdf5-openmpi-dev will disable med support... :( I understand that libhdf5-openmpi-dev is not available for all platforms but it seems it exists for almost all platfomrs except m68k (unofficial port). To my point of view it is best to keep libhdf5-openmpi-dev to enable med support on most of the platforms and wait for libhdf5-openmpi-dev support for m68k... Sorry, my bad. Anton provided me with the fix about that. I am going to upload it very soon. Sylvestre -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#613056: Please compile gmsh with support for .med files
Sylvestre has just uploaded changes with proposed way: libhdf5-openmpi-dev[alpha amd64 i386 ia64 kfreebsd-amd64 kfreebsd-i386 powerpc sparc], libhdf5-lam-dev[!alpha !amd64 !i386 !ia64 !kfreebsd-amd64 !kfreebsd-i386 !powerpc !sparc] Let's see how it will be compiled. A. -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#613056: Please compile gmsh with support for .med files
libhdf5-mpi-dev This package depends on the default MPI version of HDF5 for each platform. Probably, you are right. Anton -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#613056: Please compile gmsh with support for .med files
Le jeudi 31 mars 2011 à 10:21 +0200, Anton Gladky a écrit : libhdf5-mpi-dev This package depends on the default MPI version of HDF5 for each platform. Probably, you are right. Indeed. Is it ok with you ? Index: trunk/debian/control === --- trunk/debian/control(révision 38290) +++ trunk/debian/control(copie de travail) @@ -10,8 +10,7 @@ libopencascade-modeling-dev, libcgns-dev (= 2.5.3), libmed-dev (= 2.3.6), libmedc-dev (= 2.3.6), - libhdf5-openmpi-dev[alpha amd64 i386 ia64 kfreebsd-amd64 kfreebsd-i386 powerpc sparc], - libhdf5-lam-dev[!alpha !amd64 !i386 !ia64 !kfreebsd-amd64 ! kfreebsd-i386 !powerpc !sparc], + libhdf5-mpi-dev, libscotchmetis-dev, libblas-dev, liblapack-dev Standards-Version: 3.9.1 S -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#613056: Please compile gmsh with support for .med files
Is it ok with you ? Index: trunk/debian/control === --- trunk/debian/control(révision 38290) +++ trunk/debian/control(copie de travail) @@ -10,8 +10,7 @@ libopencascade-modeling-dev, libcgns-dev (= 2.5.3), libmed-dev (= 2.3.6), libmedc-dev (= 2.3.6), - libhdf5-openmpi-dev[alpha amd64 i386 ia64 kfreebsd-amd64 kfreebsd-i386 powerpc sparc], - libhdf5-lam-dev[!alpha !amd64 !i386 !ia64 !kfreebsd-amd64 ! kfreebsd-i386 !powerpc !sparc], + libhdf5-mpi-dev, libscotchmetis-dev, libblas-dev, liblapack-dev Standards-Version: 3.9.1 Yes, but we have to check it locally first. Anyway, with this option gmsh finds med-libraries and starts to compile. A -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#613056: Please compile gmsh with support for .med files
Le jeudi 31 mars 2011 à 10:36 +0200, Anton Gladky a écrit : Is it ok with you ? Yes, but we have to check it locally first. OK, please let me know when you tested. I will upload it if you don't find issues. Sylvestre -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#613056: Please compile gmsh with support for .med files
It is ok. A. On Thu, Mar 31, 2011 at 10:43 AM, Sylvestre Ledru sylves...@debian.org wrote: OK, please let me know when you tested. I will upload it if you don't find issues. Sylvestre -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#613056: Please compile gmsh with support for .med files
Uploaded. Thanks, Sylvestre Le jeudi 31 mars 2011 à 11:06 +0200, Anton Gladky a écrit : It is ok. A. On Thu, Mar 31, 2011 at 10:43 AM, Sylvestre Ledru sylves...@debian.org wrote: OK, please let me know when you tested. I will upload it if you don't find issues. Sylvestre -- debian-science-maintainers mailing list debian-science-maintain...@lists.alioth.debian.org http://lists.alioth.debian.org/mailman/listinfo/debian-science-maintainers -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#613056: Please compile gmsh with support for .med files
On Tue, 2011-03-29 at 21:59 +0200, Sylvestre Ledru wrote:
Le mardi 29 mars 2011 à 21:45 +0200, Andrea Palazzi a écrit :
Package: gmsh
Version: 2.5.0.dfsg-2
Followup-For: Bug #613056
Is there someone taking care of this? In the current binaries (and
also in dfsg-3) .med support is not enabled, however if I compile it
on my host support is enabled...
How can I test it ?
In the build log, I can see the define: -DENABLE_MED=ON
https://buildd.debian.org/fetch.cgi?pkg=gmshver=2.5.0.dfsg-3arch=i386stamp=1300706782file=log
thanks
S
I think I found where the problem comes from:
Even if the flaf ENABLE_MED is ON it seems that med libraries are not
correctly detected. If we take a look a CMakeLists.txt in gmsh main
directory we see :
if(ENABLE_MED OR ENABLE_CGNS)
find_library(HDF5_LIB hdf5)
if(HDF5_LIB)
if(ENABLE_MED)
find_library(MED_LIB med)
if(MED_LIB)
set_config_option(HAVE_MED Med)
list(APPEND EXTERNAL_LIBRARIES ${MED_LIB})
endif(MED_LIB)
endif(ENABLE_MED)
if(ENABLE_CGNS)
find_library(CGNS_LIB cgns)
if(CGNS_LIB)
set_config_option(HAVE_LIBCGNS Cgns)
list(APPEND EXTERNAL_LIBRARIES ${CGNS_LIB})
endif(CGNS_LIB)
endif(ENABLE_CGNS)
if(MED_LIB OR CGNS_LIB)
list(APPEND EXTERNAL_LIBRARIES ${HDF5_LIB})
find_library(SZ_LIB szlib)
if(SZ_LIB)
list(APPEND EXTERNAL_LIBRARIES ${SZ_LIB})
endif(SZ_LIB)
if(NOT HAVE_LIBZ) # necessary for non-GUI builds
find_package(ZLIB)
if(ZLIB_FOUND)
set_config_option(HAVE_LIBZ Zlib)
list(APPEND EXTERNAL_LIBRARIES ${ZLIB_LIBRARIES})
endif(ZLIB_FOUND)
endif(NOT HAVE_LIBZ)
endif(MED_LIB OR CGNS_LIB)
endif(HDF5_LIB)
endif(ENABLE_MED OR ENABLE_CGNS)
So we can deduce that the med libraries would only be checked if hdf5
lib is found!
In the control file there is no direct refence to a package containing
any libhdf5.so. There should be a BuildDepends on libhdf5-dev |
libhdf5-openmpi-dev...
So my guess is that adding libhdf5-dev | libhdf5-openmpi-dev... in
debian/control would fix the problem.
Best
C.
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Bug#613056: Please compile gmsh with support for .med files
On Wed, 2011-03-30 at 09:43 +0200, trophime wrote:
On Tue, 2011-03-29 at 21:59 +0200, Sylvestre Ledru wrote:
Le mardi 29 mars 2011 à 21:45 +0200, Andrea Palazzi a écrit :
Package: gmsh
Version: 2.5.0.dfsg-2
Followup-For: Bug #613056
Is there someone taking care of this? In the current binaries (and
also in dfsg-3) .med support is not enabled, however if I compile it
on my host support is enabled...
How can I test it ?
In the build log, I can see the define: -DENABLE_MED=ON
https://buildd.debian.org/fetch.cgi?pkg=gmshver=2.5.0.dfsg-3arch=i386stamp=1300706782file=log
thanks
S
I think I found where the problem comes from:
Even if the flaf ENABLE_MED is ON it seems that med libraries are not
correctly detected. If we take a look a CMakeLists.txt in gmsh main
directory we see :
if(ENABLE_MED OR ENABLE_CGNS)
find_library(HDF5_LIB hdf5)
if(HDF5_LIB)
if(ENABLE_MED)
find_library(MED_LIB med)
if(MED_LIB)
set_config_option(HAVE_MED Med)
list(APPEND EXTERNAL_LIBRARIES ${MED_LIB})
endif(MED_LIB)
endif(ENABLE_MED)
if(ENABLE_CGNS)
find_library(CGNS_LIB cgns)
if(CGNS_LIB)
set_config_option(HAVE_LIBCGNS Cgns)
list(APPEND EXTERNAL_LIBRARIES ${CGNS_LIB})
endif(CGNS_LIB)
endif(ENABLE_CGNS)
if(MED_LIB OR CGNS_LIB)
list(APPEND EXTERNAL_LIBRARIES ${HDF5_LIB})
find_library(SZ_LIB szlib)
if(SZ_LIB)
list(APPEND EXTERNAL_LIBRARIES ${SZ_LIB})
endif(SZ_LIB)
if(NOT HAVE_LIBZ) # necessary for non-GUI builds
find_package(ZLIB)
if(ZLIB_FOUND)
set_config_option(HAVE_LIBZ Zlib)
list(APPEND EXTERNAL_LIBRARIES ${ZLIB_LIBRARIES})
endif(ZLIB_FOUND)
endif(NOT HAVE_LIBZ)
endif(MED_LIB OR CGNS_LIB)
endif(HDF5_LIB)
endif(ENABLE_MED OR ENABLE_CGNS)
So we can deduce that the med libraries would only be checked if hdf5
lib is found!
In the control file there is no direct refence to a package containing
any libhdf5.so. There should be a BuildDepends on libhdf5-dev |
libhdf5-openmpi-dev...
So my guess is that adding libhdf5-dev | libhdf5-openmpi-dev... in
debian/control would fix the problem.
Best
C.
I have verified that adding libhdf5-openmpi-dev to Build-Depend solve
the problem :
-- Found Med
-- Found OpenCascade
-- Looking for vsnprintf
-- Looking for vsnprintf - found
-- Looking for sys/socket.h
-- Looking for sys/socket.h - found
-- Check size of socklen_t
-- Check size of socklen_t - done
-- Looking for dlfcn.h
-- Looking for dlfcn.h - found
-- Found Dlopen
Gmsh has been configured for Linux with the following options: Ann Bamg
Blas Chaco DIntegration Dlopen FlTree Fltk Gmm Have64BitSizeT Jpeg
Kbipack Lapack MPI MathEx Med Mesh Metis Mpeg NativeFileChooser Netgen
OpenCascade OpenGL Parser Plugins Png Post Solver Zlib
C compiler: /usr/bin/cc
C++ compiler: /usr/bin/mpic++
Build type: RelWithDebInfo
Install prefix: /usr
I have upload the change in debian science svn.
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Bug#613056: Please compile gmsh with support for .med files
Le mercredi 30 mars 2011 à 16:43 +0200, trophime a écrit : On Wed, 2011-03-30 at 09:43 +0200, trophime wrote: On Tue, 2011-03-29 at 21:59 +0200, Sylvestre Ledru wrote: Le mardi 29 mars 2011 à 21:45 +0200, Andrea Palazzi a écrit : Package: gmsh Version: 2.5.0.dfsg-2 Followup-For: Bug #613056 [...] I have upload the change in debian science svn. Thanks for finding that. Please let me know if you need me to upload it. Sylvestre -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#613056: Please compile gmsh with support for .med files
Please, just wait a little bit with upload. There are some small things in control, that need to be fixed as well. Anton -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#613056: Please compile gmsh with support for .med files
Please, have a look at rev.38287. Is it ok? Also libhdf5-openmpi-dev is not available for all platforms, will we not have problems with that? http://packages.debian.org/sid/libhdf5-openmpi-dev Anton On Wed, Mar 30, 2011 at 4:51 PM, Anton Gladky gladky.an...@gmail.com wrote: Please, just wait a little bit with upload. There are some small things in control, that need to be fixed as well. Anton -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#613056: Please compile gmsh with support for .med files
Le mercredi 30 mars 2011 à 17:02 +0200, Anton Gladky a écrit : Please, have a look at rev.38287. Is it ok? Also libhdf5-openmpi-dev is not available for all platforms, will we not have problems with that? http://packages.debian.org/sid/libhdf5-openmpi-dev You are right. The correct package is mpi-default-dev here. Thanks! Compilation is started! Sylvestre -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#613056: Please compile gmsh with support for .med files
Package: gmsh Version: 2.5.0.dfsg-2 Followup-For: Bug #613056 Is there someone taking care of this? In the current binaries (and also in dfsg-3) .med support is not enabled, however if I compile it on my host support is enabled... -- System Information: Debian Release: wheezy/sid APT prefers unstable APT policy: (500, 'unstable'), (500, 'testing') Architecture: amd64 (x86_64) Kernel: Linux 2.6.32-5-amd64 (SMP w/6 CPU cores) Locale: LANG=it_IT.UTF-8, LC_CTYPE=it_IT.UTF-8 (charmap=UTF-8) Shell: /bin/sh linked to /bin/dash Versions of packages gmsh depends on: ii dpkg1.15.8.10Debian package management system ii install-info4.13a.dfsg.1-6 Manage installed documentation in ii libatlas3gf-base3.8.3-29 Automatically Tuned Linear Algebra ii libc6 2.11.2-11Embedded GNU C Library: Shared lib ii libcgns22.5.5-1 CFD General Notation System librar ii libfltk1.1 1.1.10-4 Fast Light Toolkit - shared librar ii libgcc1 1:4.5.2-4GCC support library ii libgl1-mesa-glx [libgl1 7.7.1-4 A free implementation of the OpenG ii libglu1-mesa [libglu1] 7.7.1-4 The OpenGL utility library (GLU) ii libgomp14.5.2-4 GCC OpenMP (GOMP) support library ii libhdf5-openmpi-1.8.4 1.8.4-patch1-2 Hierarchical Data Format 5 (HDF5) ii libice6 2:1.0.7-1X11 Inter-Client Exchange library ii libjpeg62 6b1-1The Independent JPEG Group's JPEG ii libmed1 2.3.6-5 Library to exchange meshed data (F ii libopencascade-foundati 6.3.0.dfsg.1-6 OpenCASCADE CAE platform shared li ii libopencascade-modeling 6.3.0.dfsg.1-6 OpenCASCADE CAE platform shared li ii libopenmpi1.3 1.4.3-1 high performance message passing l ii libpng12-0 1.2.44-1 PNG library - runtime ii libscotch-5.1 5.1.11.dfsg-3programs and libraries for graph, ii libsm6 2:1.2.0-1X11 Session Management library ii libstdc++6 4.5.2-4 The GNU Standard C++ Library v3 ii libx11-62:1.4.1-5X11 client-side library ii libxext62:1.2.0-2X11 miscellaneous extension librar ii zlib1g 1:1.2.3.4.dfsg-3 compression library - runtime Versions of packages gmsh recommends: ii mpi-default-bin 0.6Standard MPI runtime programs gmsh suggests no packages. -- no debconf information -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#613056: Please compile gmsh with support for .med files
I will try to have a look. Anton On Tue, Mar 29, 2011 at 9:45 PM, Andrea Palazzi palazziand...@yahoo.it wrote: Package: gmsh Version: 2.5.0.dfsg-2 Followup-For: Bug #613056 Is there someone taking care of this? In the current binaries (and also in dfsg-3) .med support is not enabled, however if I compile it on my host support is enabled... -- System Information: Debian Release: wheezy/sid APT prefers unstable APT policy: (500, 'unstable'), (500, 'testing') Architecture: amd64 (x86_64) Kernel: Linux 2.6.32-5-amd64 (SMP w/6 CPU cores) Locale: LANG=it_IT.UTF-8, LC_CTYPE=it_IT.UTF-8 (charmap=UTF-8) Shell: /bin/sh linked to /bin/dash Versions of packages gmsh depends on: ii dpkg 1.15.8.10 Debian package management system ii install-info 4.13a.dfsg.1-6 Manage installed documentation in ii libatlas3gf-base 3.8.3-29 Automatically Tuned Linear Algebra ii libc6 2.11.2-11 Embedded GNU C Library: Shared lib ii libcgns2 2.5.5-1 CFD General Notation System librar ii libfltk1.1 1.1.10-4 Fast Light Toolkit - shared librar ii libgcc1 1:4.5.2-4 GCC support library ii libgl1-mesa-glx [libgl1 7.7.1-4 A free implementation of the OpenG ii libglu1-mesa [libglu1] 7.7.1-4 The OpenGL utility library (GLU) ii libgomp1 4.5.2-4 GCC OpenMP (GOMP) support library ii libhdf5-openmpi-1.8.4 1.8.4-patch1-2 Hierarchical Data Format 5 (HDF5) ii libice6 2:1.0.7-1 X11 Inter-Client Exchange library ii libjpeg62 6b1-1 The Independent JPEG Group's JPEG ii libmed1 2.3.6-5 Library to exchange meshed data (F ii libopencascade-foundati 6.3.0.dfsg.1-6 OpenCASCADE CAE platform shared li ii libopencascade-modeling 6.3.0.dfsg.1-6 OpenCASCADE CAE platform shared li ii libopenmpi1.3 1.4.3-1 high performance message passing l ii libpng12-0 1.2.44-1 PNG library - runtime ii libscotch-5.1 5.1.11.dfsg-3 programs and libraries for graph, ii libsm6 2:1.2.0-1 X11 Session Management library ii libstdc++6 4.5.2-4 The GNU Standard C++ Library v3 ii libx11-6 2:1.4.1-5 X11 client-side library ii libxext6 2:1.2.0-2 X11 miscellaneous extension librar ii zlib1g 1:1.2.3.4.dfsg-3 compression library - runtime Versions of packages gmsh recommends: ii mpi-default-bin 0.6 Standard MPI runtime programs gmsh suggests no packages. -- no debconf information -- debian-science-maintainers mailing list debian-science-maintain...@lists.alioth.debian.org http://lists.alioth.debian.org/mailman/listinfo/debian-science-maintainers -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#613056: Please compile gmsh with support for .med files
Le mardi 29 mars 2011 à 21:45 +0200, Andrea Palazzi a écrit : Package: gmsh Version: 2.5.0.dfsg-2 Followup-For: Bug #613056 Is there someone taking care of this? In the current binaries (and also in dfsg-3) .med support is not enabled, however if I compile it on my host support is enabled... How can I test it ? In the build log, I can see the define: -DENABLE_MED=ON https://buildd.debian.org/fetch.cgi?pkg=gmshver=2.5.0.dfsg-3arch=i386stamp=1300706782file=log thanks S -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#613056: Please compile gmsh with support for .med files
--- Mar 29/3/11, Sylvestre Ledru sylves...@debian.org ha scritto: Da: Sylvestre Ledru sylves...@debian.org Oggetto: Re: Bug#613056: Please compile gmsh with support for .med files A: Andrea Palazzi palazziand...@yahoo.it, 613...@bugs.debian.org Data: Martedì 29 marzo 2011, 21:59 Le mardi 29 mars 2011 à 21:45 +0200, Andrea Palazzi a écrit : Package: gmsh Version: 2.5.0.dfsg-2 Followup-For: Bug #613056 Is there someone taking care of this? In the current binaries (and also in dfsg-3) .med support is not enabled, however if I compile it on my host support is enabled... How can I test it ? In the build log, I can see the define: -DENABLE_MED=ON https://buildd.debian.org/fetch.cgi?pkg=gmshver=2.5.0.dfsg-3arch=i386stamp=1300706782file=log However, later in the log: Gmsh has been configured for Linux with the following options: Ann Bamg Blas Chaco DIntegration Dlopen FlTree Fltk Gmm Jpeg Kbipack Lapack MPI MathEx Mesh Metis Mpeg NativeFileChooser Netgen OpenCascade OpenGL Parser Plugins Png Post Solver Zlib Note that med is missing here. With the package built on my machine, however, in the message console I have this: Info: Build options : Ann Bamg Blas(ATLAS) Chaco DIntegration Dlopen FlTree Fltk Gmm Have64BitSizeT Jpeg Kbipack Lapack(ATLAS) MPI MathEx Med Mesh Metis Mpeg NativeFileChooser Netgen OpenCascade OpenGL Parser Plugins Png Post Solver Zlib Here med support is present, and in fact it works. Tell me if you need some more information, or want me to do some testing. Bye Andrea -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
Bug#613056: Please compile gmsh with support for .med files
Andrea, could you not, please, attach any .med-file? Thanks. Anton -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of unsubscribe. Trouble? Contact listmas...@lists.debian.org
