Hi Graham,
On 20 November 2017 at 17:06, Graham Inggs wrote:
| Hi Dirk
|
| On 19/11/2017 18:08, Dirk Eddelbuettel wrote:
| > Am I correct in assuming that it addresses this issue for BioConductor?
|
| I had a look at what I assumed is the first beta [1] for 3.4.3. I see
I am actually
Hi Dirk
On 19/11/2017 18:08, Dirk Eddelbuettel wrote:
Am I correct in assuming that it addresses this issue for BioConductor?
I had a look at what I assumed is the first beta [1] for 3.4.3. I see
the following in NEWS:
"Fix calling of methods on S4 generics that dispatch on ... when the
Graham, Charles,
R 3.4.3 is scheduled for Nov 30.
Am I correct in assuming that it addresses this issue for BioConductor?
Thanks, Dirk
--
http://dirk.eddelbuettel.com | @eddelbuettel | e...@debian.org
Control: reassign -1 src:r-bioc-s4vectors 0.14.3-1
Control: affects -1 = r-bioc-iranges r-bioc-variantannotation
Control: tags -1 + fixed-upstream
Control: clone -1 -2
Control: reassign -2 src:r-bioc-iranges 2.10.2-1
On 30 September 2017 at 14:30, Dirk Eddelbuettel wrote:
> Out
On 30 September 2017 at 09:13, Graham Inggs wrote:
| Source: r-base
| Version: 3.4.1.20170921-1
Out of date. We have 3.4.2 now.
| Affects: r-bioc-biocgenerics r-bioc-iranges r-bioc-variantannotation
| User: ubuntu-de...@lists.ubuntu.com
| Usertags: origin-ubuntu artful autopkgtest
Also wrong
On 30 September 2017 at 09:52, Charles Plessy wrote:
> The order of builds may matter (because of subtelties of the S4 system).
> Have you tried rebuilding r-bioc-iranges in a system after the rebuilt
> r-bioc-biocgenerics package was installed ?
I did rebuild r-bioc-iranges
Le Sat, Sep 30, 2017 at 04:52:32PM +0900, Charles Plessy a écrit :
> The order of builds may matter (because of subtelties of the S4 system).
> Have you tried rebuilding r-bioc-iranges in a system after the rebuilt
> r-bioc-biocgenerics package was installed ?
Sorry, I did not see that the binNMU
Le Sat, Sep 30, 2017 at 09:13:10AM +0200, Graham Inggs a écrit :
>
> Rebuilding the arch:all package r-bioc-biocgenerics against r-base-dev
> 3.4.1.20170921-1 or 3.4.2-1 seems to cause the eventual failure of
> autopkgtests in r-bioc-iranges and r-bioc-variantannotation.
>
> IRanges RUnit Tests
Source: r-base
Version: 3.4.1.20170921-1
Affects: r-bioc-biocgenerics r-bioc-iranges r-bioc-variantannotation
User: ubuntu-de...@lists.ubuntu.com
Usertags: origin-ubuntu artful autopkgtest
Hi Dirk
Rebuilding the arch:all package r-bioc-biocgenerics against r-base-dev
3.4.1.20170921-1 or 3.4.2-1
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