ral species including Arabidopsis
thaliana, Coccidioides species, Cryptococcus neoformans, and Brugia
malayi.
.
Homepage: http://www.tigr.org/software/GlimmerHMM/
A package is a available at
http://bioinformatics.pzr.uni-rostock.de/~moeller/debian/tigr-glimmerhmm/
Cheers,
Steffen Moell
Package: ncbi-tools6
Version: 6.1.20040616-1
Severity: wishlist
Hello,
the program perlprimer would make good use of the spidey program from
the demo folder.
http://perlprimer.sourceforge.net/
A preliminary package of perlprimer is available on
http://bioinformatics.pzr.uni-rostock.de/~moeller
-thingy. This was rude. I felt stressed.
Steffen
On Wed, Jan 26, 2005 at 05:18:13PM +0100, G?ran Weinholt wrote:
> On Wed, Jan 26, 2005 at 03:41:55PM +0100, Steffen Moeller wrote:
> > Hello G?ran,
> >
> > where does the license say that I am not allowed to do modifications
Hi all,
the script is explained at the Wiki site of the BioC project.
deb [WWW] http://public.pzr.uni-rostock.de/~moeller/mirror ./
The URL provided for the repository is currently defunct since both the
machines and myself have physically moved.
Kind regards
Steffen
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appropriate commands add to the
postinst and postrm scripts of graphviz to be adoptable
from the atlas3-base package.
/var/lib/dpkg/info/atlas3-base.post{inst,rm}
Kind regards and thanks
Steffen Moeller
-- System Information:
Debian Release: 3.1
APT prefers testing
APT policy: (900, 'te
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller <[EMAIL PROTECTED]>
* Package name: haploview
Version : 3.2
Upstream Author : Jeffrey Barrett, Julian Maller in Mark Daly's lab <[EMAIL
PROTECTED]>
* URL : http://www.broad.mit.edu/mpg/ha
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller <[EMAIL PROTECTED]>
* Package name: qtdmm
Version : 0.8.4
Upstream Author : Matthias Toussaint <[EMAIL PROTECTED]>
* URL : http://www.mtoussaint.de/qtdmm.html
* License : GPL
Description
Package: wnpp
Severity: wishlist
* Package name: limma
Version : 1.8.16
Upstream Author : Gordon Smyth < [EMAIL PROTECTED]>
* URL : http://bioinf.wehi.edu.au/limma
* License : LGPL
Description : [Biology] library for linear models and differential gene
e
Package: wnpp
Severity: wishlist
* Package name: coils
Version : no version
Upstream Author : Rob Russell <[EMAIL PROTECTED]>
* URL : http://www.russell.embl.de/cgi-bin/coils-svr.pl
* License : GPL
Description : [Biology] prediction of coiled coil seconda
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller <[EMAIL PROTECTED]>
* Package name: mipe
Version : 1.1
Upstream Author : Jan Aerts <[EMAIL PROTECTED]>
* URL : http://mipe.sourceforge.net
* License : LGPL
Description : [Biology] Tool t
Package: wnpp
Severity: wishlist
* Package name: exonerate
Version : 1.0.0
Upstream Author : Guy Slater <[EMAIL PROTECTED]>
* URL : http://www.ebi.ac.uk/~guy/exonerate/
* License : LGPL
Description : [Biology] Pairwise comparison of nucleotide sequences
Package: wnpp
Severity: wishlist
* Package name: cactus
Version : 4.0
Upstream Author : Cactus Maintainer <[EMAIL PROTECTED]>
* URL : http://www.cactuscode.org/
* License : GPL
Description : environment for scientific and distributed computing
Cactus is
Package: gcj-4.0
Severity: normal
Analogous to version 3.3 of gcj, reported as Bug#238033,
gcj reports on a missing spec file because of a missing dependency to
libgcj-dev. Adding that made the problem disappear.
ii libgcj-dev 4.0.1-3 Java
development
Hi Luk,
thank you for the NMU. I debianised a new upstream version
of qtdmm that accomodates your patch in
http://public.pzr.uni-rostock.de/~moeller/debian/qtdmm/
and informed my sponsor Andreas <[EMAIL PROTECTED]> about
its existance.
Cheers,
Steffen
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Hi, I took over maintenance from Andreas Tille a while back who since
then kindly sponsors most of my packages, including Clustal[XY].
I wanted to wait for a new upstream release of ClutalW before going
through the problem of compiling it on all the platforms it ran on
before. You now gave me anoth
Package: openoffice.org2-writer
Version: 1.9.121
Severity: important
Please add libstlport4 to the dependencies.
I have no [EMAIL PROTECTED]:~$ /usr/lib/openoffice2/program/soffice &
[1] 11207
I have no [EMAIL PROTECTED]:~$ /usr/lib/openoffice2/program/javaldx: error
while loading shared librarie
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller <[EMAIL PROTECTED]>
* Package name: libtfbs-perl
Version : 0.5.0
Upstream Author : Boris Lenhard <[EMAIL PROTECTED]>
* URL : http://forkhead.cgb.ki.se/TFBS/
* License : artistic
Hi Thibaut,
I just tested 5.4.11-4 on an AMD X2 4200+ with Debian's SETI client which is
fine. On all other 5 projects I tried so far did not support the _64 platform
and reported that with the exact message that you where expecting.
While I am not convinced about the scientific merits of SIMAP
Hi Thibaut,
you made a good point from how I see it. I could imagine a group of users that
is assigned to the boinc group for editing the files. Should the permission
then not rather be 660 ?
Many greetings
Steffen (who has collected 490 credits since you pointed him to boincsimap)
On Saturda
On Sunday 21 January 2007 15:55, Thibaut VARENE wrote:
> On 1/21/07, Frank S. Thomas <[EMAIL PROTECTED]> wrote:
> > > I don't know if that's of any help, but I tested on an Ubuntu Dapper
> > > machine (which has 5.4.9) and there it works just fine.
> > >
> > > I'll see if I can investigate this mor
Package: wnpp
Owner: Steffen Moeller <[EMAIL PROTECTED]>
Severity: wishlist
*** Please type your report below this line ***
* Package name: r-cran-cgiwithr
Version : 0.72
* URL : http://www.omegahat.org/CGIwithR
* License : GPL
Programming L
Package: wnpp
Owner: Steffen Moeller <[EMAIL PROTECTED]>
Severity: wishlist
*** Please type your report below this line ***
* Package name: r-cran-r2html
Version : 1.58
* URL : http://www.feferraz.net/en/R2HTML.html
* License : GPL
Programming L
On Monday 04 December 2006 22:35, Folkert van Heusden wrote:
> > > Nothing builds with this library.
> >
> > That's not true. The boinc-app-seti package builds with this package
> > (therefore I'm downgrading the severity of this bug). Maybe you should
> > have a look at boinc-app-seti's makefiles
Hi Folkert,
On Wednesday 06 December 2006 20:08, Folkert van Heusden wrote:
> The problem can be closed.
> The solutions was:
> do NOT do:
> g++ -lboinc file.cpp
> but to
> g++ file.cpp -lboinc
> instead (which puzzles me but hey it works).
ah, ok, I thought it was omitted. As a try of a possible
Package: wnpp
Owner: Steffen Moeller <[EMAIL PROTECTED]>
Severity: wishlist
*** Please type your report below this line ***
* Package name: libjson.org-java
Upstream Author : [EMAIL PROTECTED]
* URL : www.json.org/java
* License : unrestricted
Programming Lang
Hi,
I have package ready for a while and have almost forgotten about it. What is
missing is a reply from upstream if he would appreciate it. I have not asked
again, I probably should. If you are interested in my package, to sponsor me,
or to maintain it, then at least I would appreciate it.
B
Salut Thibaut,
On Saturday 03 February 2007 01:38:34 Thibaut VARENE wrote:
> Attached is an updated patch to deal with sparc machines (tested on my Sun
> U30).
I had a quick glimpse at your patch and liked it, at least as a start,
suggesting to place it as a dpatch into the debian/patches folder
On Sunday 04 February 2007 16:00:22 Thibaut VARENE wrote:
> On 2/3/07, Thibaut VARENE <[EMAIL PROTECTED]> wrote:
> > On 2/3/07, Steffen Moeller <[EMAIL PROTECTED]> wrote:
> > > Salut Thibaut,
> > >
> > > On Saturday 03 February 2007 01:38:34 Thib
of dpatch.
+
+ -- Steffen Moeller <[EMAIL PROTECTED]> Sun, 4 Feb 2007 12:43:06 +0100
+
dh-make (0.42) unstable; urgency=low
* Stopped shiiping the kde examples (Closes: #372287)
@@ -22,7 +28,7 @@
* Kernel module rules use sname Closes: #350938, #354883
* Typo removed from kernel rules o
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller
* Package name: pal2nal
Version : 13
* URL : http://www.bork.embl.de/pal2nal/
* License : unclear, communication with authors pending
Programming Lang: Perl
Description : converts proteins to
Package: python-central
Version: 0.6.16+nmu1
Severity: minor
Hello, I get this warning with my packages
\1 better written as $1 at /usr/bin/dh_pycentral line 203.
that would be lovely to see disappear from my build logs.
Many thanks
Steffen
-- System Information:
Debian Release: squeeze/sid
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller
* Package name: bowtie
* URL : http://bowtie-bio.sf.net
* License : Artistic and LGPL
Programming Lang: C++
Description : ultrafast memory-efficient short read aligner
This package addresses the problem to
Package: perl
Version: 5.14.2-3
Severity: important
I issued an "aptitude install perl" on a fairly recent unstable
installation and got very early
Get: 51 http://ftp.de.debian.org/debian/ sid/main perl-base amd64 5.14.2-3
[1,505 kB]
Get: 52 http://ftp.de.debian.
Package: libqt4-dbus
Version: 4:4.8-2+dfsg-6
Severity: serious
Unpacking libqtdbus4:amd64 (from .../libqtdbus4_4%3a4.8.2+dfsg-8_amd64.deb) ...
dpkg: error processing
/var/cache/apt/archives/libqtdbus4_4%3a4.8.2+dfsg-8_amd64.deb (--unpack):
trying to overwrite '/usr/lib/x86_64-linux-gnu/libQtDBus
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller
* Package name: edtsurf
* URL : http://zhanglab.ccmb.med.umich.edu/EDTSurf/
* License : custom, DFSG-free
Programming Lang: C++
Description : triangulated mesh surfaces for protein structures
EDTSurf is a
Package: mgltools-opengltk
Version: 1.5.6~rc3~cvs.20120601-1
Severity: serious
Tags: patch
It seems like some platform specific size specifications in
Swig wrappers have caused some issue. The patch below we
have locally tested to solve the issue for us and now we wait
for a confirmation by upstr
Package: kstars
Version: 4:4.8.4-1
Severity: wishlist
I experience a crash after switching on the display of constellations. My bug
report remains uninformative from the bug submission tool's perspective. What
could I do? Please kindly provide a debug package.
SM
-- System Information:
Debian
Package: kstars
Version: 4:4.8.4-1
Followup-For: Bug #694100
--- ../control 2012-11-23 23:16:25.0 +0100
+++ debian/control 2012-11-23 23:47:19.0 +0100
@@ -10,7 +10,7 @@
libeigen2-dev (>> 2.0.3), zlib1g-dev, libcfitsio3-dev (>= 3.040),
libglu1-mesa-dev, libnova-dev, libqt4
Package: release.debian.org
Severity: normal
User: release.debian@packages.debian.org
Usertags: unblock
Please unblock package ball
The uploader is upstream who kindly added a patch to fix a FTBFS.
The buildd are happy now, the package as a good rate of acceptance
on popcon http://qa.debian.o
Package: release.debian.org
Severity: normal
User: release.debian@packages.debian.org
Usertags: unblock
Please unblock package ztex-bmp
The upload closes a FTBFS issues that appeared along the update of the
free pascal compiler. It was directly provided by upstream. The package
is not in the
Package: release.debian.org
Severity: normal
User: release.debian@packages.debian.org
Usertags: unblock
Please unblock package boinc and boinc-app-seti
Right. Why do I want the two packages to be in unstable. Hm. Firstly,
I think the two belong together. The BOINC Debian packages allow everyo
Package: release.debian.org
Severity: normal
User: release.debian@packages.debian.org
Usertags: unblock
Please unblock package boinc-app-seti
This upload fixes the remaining issues with the boinc-app-seti packages
* works with both boinc client 7.0.27 (currently in testing) and 7.0.33 (in
n
Source: kdeartwork-dbg
Severity: minor
Hello,
I commonly update software with apt-get on the -dbg package. This way I also
get all the dependencies, i.e. the regular package, with it. With kde this does
not work. Could you please change the suggests to a recommends or depends for
all -dbg pack
Package: blcr-dkms
Version: 0.8.4-1
Followup-For: Bug #638339
DKMS make.log for blcr-0.8.4 for kernel 3.1.0-1-amd64 (x86_64)
Sat Jan 14 12:43:27 CET 2012
make: Entering directory `/usr/src/linux-headers-3.1.0-1-amd64'
/var/lib/dkms/blcr/0.8.4/build/Kbuild:19:
/var/lib/dkms/blcr/0.8.4/build/module
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller
* Package name: openmm
Version : 4.1
* URL : https://simtk.org/home/openmm_suite
* License : custom
Programming Lang: C++, Python
Description : library for molecular dynamics
OpenMM is a library
Package: ifupdown
Version: 0.7.1
Severity: important
Hello,
sorry for bothering you with this. I removed the ppp package and upgraded to a
new kernel
but otherwise I feel not to have done anything unusual.
$ sudo ifup eth0
[sudo] password for moeller:
ifup: failed to open statefile /run/netwo
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller
* Package name: trimmomatic
Version : 0.22
* URL : http://www.usadellab.org/cms/index.php?page=trimmomatic
* License : GPL-3+
Programming Lang: Java
Description : flexible read trimming tool for
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller
* Package name: python-biom
Version : 1.0.0
* URL : http://biom-format.org/
* License : GPL
Programming Lang: Python
Description : observation contingency tables for biological sampleS
The
Package: release.debian.org
Severity: normal
User: release.debian@packages.debian.org
Usertags: unblock
Please unblock package boinc
It is currently not in testing, once removed because of a dependency of a
virtual binary package on the unfortunate fglrx drivers.
No serious bugs. It is much
Package: kdeutils
Version: 4:4.8.4+5.77
Severity: wishlist
Hello,
I do not want/need kgpg on my system but would like to keep kdeutils for
commodity. Since I cannot remove kgpg without also removing kdeutils, I suggest
to make the dependency less strict, so I can put kgpg on hold.
Many thanks
Package: release.debian.org
Severity: normal
User: release.debian@packages.debian.org
Usertags: rm
The PHP code shipping with the BOINC Server Maker package was not updated
for a long time because of the freeze coinciding with the general overhaul
the BOINC package structure. An important sec
Package: wine-unstable
Version: 1.5.6-2
Severity: minor
Hello,
the wine community blocks my bug reports with requests to install a more recent
version. They may have a point :)
Steffen
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Package: wnpp
Severity: wishlist
Owner: Steffen Moeller
* Package name: noko-fsoraw
* URL :
http://sourceforge.net/apps/mediawiki/noko/index.php?title=Fsoraw
* License : GPL-3+
Description : FSO resource allocation wrapper
fsoraw (FSO Resource Allocation Wrapper
Package: libreadline5-dev
Version: 5.2-7
Severity: wishlist
The message appears even twice :)
Setting up libreadline5-dev (5.2-7) ...
Ignoring install-info called from maintainer script
The package libreadline5-dev should be rebuilt with new debhelper to get
trigger support
Ignoring install-info
Package: base-files
Version: 6.5
Severity: normal
Hello,
I am a fan of the AGPL and kindly ask it to be added to
/usr/shar/common-licenses.
It currently comes with the R package,
$ locate AGPL
/usr/share/R/share/licenses/AGPL-3
and perl has some bits to it
/usr/share/man/man3/Sof
Package: aweather
Version: 0.5.2-1
Severity: minor
Hello,
please kindly forward this information. Writing from Europe, it would be great
if you could help with some local weather pointers. Well, I was just curious.
Cheers,
Steffen
moeller@moeller-desktop:~ $ aweather
** (aweather:32460
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller
* Package name: ztex-bmp
Upstream Author : Stefan Ziegenbalg
* URL : http://www.ztex.de
* License : GPL-3
Programming Lang: Pascal
Description : babel universal macro processor
The package is close to be
Package: dh-make
Version: 0.59
Severity: minor
This is fixed with -f, anyway ... would be nice.
Thanks.
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Package: dpkg
Version: 1.16.0.3
Severity: wishlist
$ dpkg -c ../build-area/*.deb
dpkg-deb: error: --contents takes exactly one argument
I just do not see why. Would you accept a patch for that?
Steffen
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Package: wnpp
Severity: wishlist
* Package name: eigensoft
Version : 4.2
* URL : http://www.hsph.harvard.edu/faculty/alkes-price/software/
* License : non-free but redistributable
Programming Lang: C, Perl
Description : reduction of statistical effects by
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller
* Package name: ztex
* URL : http://www.ztex.de/
* License : GPL
Programming Lang: C, Java
Description : programming and control of EZ-USB microcontrollers
The company ZTEX offers USB boards with
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller
* Package name: jaxb2-maven-plugin
Version : 1.5
* URL : http://mojo.codehaus.org/jaxb2-maven-plugin
* License : Apache-2.0
Programming Lang: Java
Description : interlinking XML files with Java
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller
* Package name: doxia-1.0
Version : 1.0~alpha-6
* URL : http://svn.apache.org/viewvc/maven/doxia/doxia/tags/
Programming Lang: Java
Description : 1.0 alpha version of Doxia from codehaus
Doxia from
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller
* Package name: sump-logicanalyzer
Version : 0.8
* URL : http://www.sump.org/
* License : GPL2+
Programming Lang: Java
Description : GUI for logic analysers
An experimental package is on its way to
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller
* Package name: libusb-java
Version : 0.8ztex20090101
* URL : http://libusbjava.sf.net
* License : LGPL
Programming Lang: Java
Description : wrapper for C library libusb
Alioth project pkg-escience
Package: colord
Version: 0.1.16-2
Severity: normal
Setting up colord (0.1.16-2) ...
dpkg: error processing colord (--configure):
subprocess installed post-installation script returned error exit status 1
configured to not write apport reports
Errors were enco
Package: colord
Version: 0.1.13-1
Severity: serious
Setting up colord (0.1.13-1) ...
dpkg: error processing colord (--configure):
subprocess installed post-installation script returned error exit status 1
configured to not write apport reports
Errors were enc
Package: libstreamanalyzer0
Version: 0.7.6-2
Severity: wishlist
Hello, I just got a crash with Dolphin and them missing debug libraries for
streamanalyzer forbid that I submit the bug via the KDE bug reporting tool.
Please add the -dbg package for Debian.
Many thanks
Steffen
-- System Informat
Package: dolphin
Version: 4:4.6.5-1
Severity: wishlist
Hello,
I just ran into a crash with Dolphin but the missing debug package prevents the
report from being submittable.
Thanks
Steffen
-- System Information:
LSB Version:
core-2.0-amd64:core-2.0-noarch:core-3.0-amd64:core-3.0-noarch:cor
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller
* Package name: linoccult
Version : 2.1.1
* URL : http://andyplekhanov.narod.ru/occult/occult.htm
* License : GPL2
Programming Lang: C
Description : prediction and visualisation of asteroidal
Package: xul-ext-zotero
Severity: wishlist
Hello,
on https://github.com/zotero/zotero-standalone-build/blob/master/build.sh I had
a look at the build instructions for the standalone version and ... well, it is
a bit tedious, but it would be great if you could possibly support such a
standalone
Package: kate-dbg
Version: 4:4.7.2-1
Severity: normal
Unpacking kate-dbg (from .../kate-dbg_4%3a4.7.2-1_amd64.deb) ...
dpkg: error processing /var/cache/apt/archives/kate-dbg_4%3a4.7.2-1_amd64.deb
(--unpack):
trying to overwrite '/usr/lib/debug/usr/lib/kde4/ktexteditor_kdatatool.so',
which is a
Package: linux-image-rt-amd64
Version: 3.2+44
Severity: wishlist
Hello,
Whom do I tell ... You know that of course, but many users are not aware of
that headers meta package and it comes very handy when updating the kernel. I
hence suggest to suggest it. It will help all those e.g. with an NVid
Package: nvidia-cuda-toolkit
Version: 4.2.9-1
Severity: normal
Tags: upstream
Hello, please kindly forward this information to the upstream developers.
There is a ticket on the GCC bugzilla
http://gcc.gnu.org/bugzilla/show_bug.cgi?id=52725
which confirms an issue with g++, but there is a nvcc part
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller
* Package name: poclbm
* URL :
* License : public domain
Programming Lang: Python
Description : Python OpenCL BitCoin Miner
BitCoins are a digital currency, exchanged freely against
all other currencies
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller
* Package name: jgromacs
Version : 1.0
* URL : http://nanomed.bioch.ox.ac.uk/jgromacs/
* License : GPL3
Programming Lang: Java
Description : library for trajectory analysis in molecular dynamics
Package: blcr-dkms
Version: 0.8.4-2
Severity: important
checking the name lister (/usr/bin/nm -B) interface... (cached) BSD nm
configure: error: --with-linux argument '3.2.0-2-amd64' is neither a kernel
version string nor a full path
make[3]: *** [/var/lib/dkms/blcr/0.8.4/build/config-stamp] Erro
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller
* Package name: pscan
Version : 1.2.1
* URL : http://159.149.109.9/pscan/
* License : unclear
Programming Lang: C++
Description : finds overrepresented transcription factor binding sites
This
Package: release.debian.org
Severity: normal
User: release.debian@packages.debian.org
Usertags: rm
Even upstream has given up on qtdmm to make the transition to current
Qt/KDE standards and develops QtDMM 2, which is not packaged for Debian.
Now Debian will not continue the maintenance of the
Package: release.debian.org
Severity: normal
User: release.debian@packages.debian.org
Usertags: rm
Please remove ztex-ezusb completely from the distribution, including unstable.
Reasons are
* virtually no response from the community
* upstream makes it too easy with tarballs to be already
this is incorrect.
Using 'Steffen Moeller ' as your from address.
Will send report to Debian (per request).
What sort of request is this? (If none of these things mean anything to you, or
you are trying to report a bug in an existing package, please press Enter to
exit reportbug.)
Package: ftp.debian.org
Severity: normal
This is the scientific application that is controlled by the
boinc-client. The client fetches and returns data, the scientific app
does all the computation. 99.% of all BOINC users download a binary
from the BOINC servers and execute that. But how could
Package: gnome-core
Version: 1:3.0+7
Severity: wishlist
dpkg: dependency problems prevent removal of gnome-bluetooth:
gnome-shell depends on gnome-bluetooth (>= 3.0.0).
gnome-user-share depends on gnome-bluetooth.
gnome-core depends on gnome-bluetooth (>= 3.0).
dpkg: error processing gnome-blue
Package: apt
Version: 0.9.5.1
Severity: normal
Hello, I see segfaults during apt-get updates, reproducibly. A second
invocation then always works fine. This is what I see, but this does not tell
too much:
Core was generated by `/usr/lib/apt/methods/rred'.
Program terminated with signal 11, Segm
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller
* Package name: soap2
Version : 2.20
* URL : http://soap.genomics.org.cn/soapaligner.html
* License : GPL-3
Programming Lang: C
Description : SOAPaligner of short next generation sequencing data
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller
* Package name: genomics.cn-soapsnp
Version : 1.0.3
* URL : http://soap.genomics.org.cn/soapsnp.html
* License : GPL-3
Programming Lang: C++
Description : SNP detection in next generation sequencing
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller
* Package name: libjbzip2-java
* URL : http://code.google.com/p/jbzip2/
* License : special
Programming Lang: Java
Description : bzip2 compression and decompression library
jbzip2 is a Java bzip2 compression
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller
* Package name: fastqc
* URL : http://www.bioinformatics.babraham.ac.uk/projects/fastqc/
* License : GPL-3
Programming Lang: Java
Description : quality control for next generation sequencing data
The Debian
Package: dpkg
Version: 1.16.2
Severity: serious
To update a package that is available both as amd64 and i386 on my machine,
dpkg fails as in
Setting up libc-bin (2.13-30) ...
(Reading database ... 290169 files and directories currently installed.)
Preparing to replace libc6:i386 2.13-27 (using .
Package: wnpp
Severity: wishlist
Subject: ITP: parallel-hashmap --
Package: wnpp
Owner: Steffen Moeller
Severity: wishlist
* Package name: parallel-hashmap
Version : 1.37
Upstream Author : Copyright:
* URL : https://github.com/greg7mdp/parallel-hashmap
* License
Package: python3-vtk9
Version: 9.1.0+really9.1.0+dfsg2-5
Severity: important
X-Debbugs-Cc: moel...@debian.org
Dear Anton, dear Gert, dear Nico,
$ sudo apt install python3-vtk9
...
python3-vtk9 : Depends on: python3 (< 3.11) but 3.11.1-1 shall be installed
I apparently fixed this locally with a m
Package: wnpp
Severity: wishlist
Subject: ITP: python-oyaml -- YAML parser but wit preserved dict ordering
Package: wnpp
Owner: Steffen Moeller
Severity: wishlist
* Package name: python-oyaml
Version : 1.0
Upstream Author : Wim Glenn
* URL : https://github.com
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller
X-Debbugs-Cc: debian-de...@lists.debian.org
* Package name: openfpgaloader
Version : 0.9
* URL : https://github.com/trabucayre/openFPGALoader
* License : Apache-2.0
Programming Lang: C/C++
Description
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller
X-Debbugs-Cc: debian-de...@lists.debian.org
* Package name: spnavcfg
Version : 1.0
* URL : https://github.com/FreeSpacenav/spnavcfg
* License : GPL
Description : GUI to configure 3Dconnexion devices
Package: linuxcnc-uspace
Version: 2.9.0~pre0+git20220903.c8c4c539b1-1
Severity: important
Tags: upstream
Upstream discussed this at https://github.com/LinuxCNC/linuxcnc/issues/2000
Am 05.09.2022 um 23:24 schrieb Petter Reinholdtsen:
[Thorsten Alteholz]
there are reverse dependencies that needs to be taken care of:
Checking reverse dependencies...
# Broken Depends:
arachne-pnr: arachne-pnr
qflow: qflow
# Broken Build-Depends:
qflow: yosys
This needs to be addressed f
Am 06.09.2022 um 10:12 schrieb Petter Reinholdtsen:
[Steffen Moeller]
I have seen it. I just do not understand what should be done about the
reverse dependencies. @petter, if you could operationalize what needs to
be done, this would be great.
I believe someone need to contact the
Package: boinc-client
Version: 5.10.8-1
Severity: wishlist
This is more a reminder for myself than a real bug report. I though it
was preferable to start the client post installation only
* when there was no prior installation of boinc-client
* there was a prior installation and it was running
Package: dot2tex
Version: 2.0.1-1
Severity: normal
Hi, the --figonly does not work for me, it is just ignored.
| sed -e '1,/Start of code/d' -e '/End of code/,$d'
is what I do to circumvent this problem, but you may have
another idea about it.
Cheers,
Steffen
-- System Information:
Debian Rel
Dear Kjell,
On Friday 01 June 2007 17:22:03 Kjell Magne Fauske wrote:
> On 6/1/07, Peter Collingbourne <[EMAIL PROTECTED]> wrote:
> > This problem seems to only occur if the tikz output format is used. The
> > attached patch should solve the problem. I will make a release shortly
> > with the pa
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