Debian packaging for plastimatch

2011-05-30 Thread Gregory Sharp
Hello, I am interested in Debian packaging for plastimatch (plastimatch.org). The procedure is more or less clear, and I have completed the tutorial to create debian directory, and make source and binary packages. So far, I have registered on Alioth and requested to join debian-med. It seems

Re: Bug#629344: ITP: plastimatch -- medical image reconstruction and registration

2011-06-05 Thread Gregory Sharp
(Oops, forgot to cc to list!) I would like to add a long description which should be given in an ITP and which you can perfectly obtain from the Debian Med tasks page (which is currently available only at the testing site[1]) Thanks Andreas! Finally I got the Alioth ssh keys to work, but

Re: Bug#629344: ITP: plastimatch -- medical image reconstruction and registration

2011-06-06 Thread Gregory Sharp
Hi Thorsten, Finally I got the Alioth ssh keys to work, but I had a trouble uploading the directory into debian-med.  Any idea what I did wrong? from which host did you checkout your repository? If it is alioth, you need to 'svn switch' to svn.debian.org. On alioth all repositories

Plastimatch first attempt

2011-06-13 Thread Gregory Sharp
Hi, The plastimatch binary package now builds without lintian errors. The source package has two warnings: W: plastimatch source: changelog-should-mention-nmu W: plastimatch source: source-nmu-has-incorrect-version-number 1.5.0-1 Could anyone advise how to fix? Is my case NMU or non-NMU?

Plastimatch second attempt

2011-06-19 Thread Gregory Sharp
Hi, (1) Lintian is now warning-free. I did have a spelling conflict between DEBFULLNAME and changelog (how did you know that Mathieu?) (2) Execute permissions fixed in svn. (3) Regarding 3rd party libraries, I removed the ones which are either not needed, or debian packages already exist.

Re: Plastimatch second attempt

2011-06-25 Thread Gregory Sharp
Feel free to ask for help if you have no idea about how to specify those Build-Depends and how to test the build in a clean pbuilder environment. To get some first help you should probably have a look into the Debian Med policy[1]. Thank you Andreas. Indeed, I was completely unaware of

Question on build dependencies: zlib / insighttoolkit

2011-06-25 Thread Gregory Sharp
Hi, I got the below build error with pbuilder. I think I can fix by adding zlib1g-dev dependency to plastimatch. But couldn't it be more correct that the dependency should be to libinsighttoolkit3-dev? Thank you Greg cd /tmp/buildd/plastimatch-1.5.0/obj-x86_64-linux-gnu/src/plastimatch

Plastimatch fixes

2011-07-24 Thread Gregory Sharp
Hi, I have updated plastimatch, to fix problem with insufficient documentation of copyright. Could this be uploaded again for review? Thank you, Greg Sharp gregsh...@geocities.com -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of unsubscribe. Trouble?

Re: Plastimatch fixes

2011-08-20 Thread Gregory Sharp
Hi Dominque, Thank you for reviewing the package. I don't think this can be re-distributed. From ./plastimatch-1.5.2/libs/specfun/readme : All the programs and subroutines  contained in this diskette are copyrighted.   However,  we give permission to the reader who purchases this

Re: Plastimatch fixes

2011-08-21 Thread Gregory Sharp
Hi Andreas, Nevertheless, it would be nice to include eventually.  It contains a useful function for computing depth dose curve for proton beams.  The authors specify a different license on the web site (below).  Would this license be OK if it can be verified? All the

Re: Debuild issue

2013-12-16 Thread Gregory Sharp
Dear Andreas, Thank you for your advice. I have a plastimatch_1.5.15+dfsg-1.orig.tar.gz, but it looks like a plastimatch_1.5.15+dfsg.orig.tar.gz is wanted.  (See below for details.) The source tarball should not contain the Debian revision number.  The -1 in the end is the Debian package

Request sponsor plastimatch + one question

2014-05-18 Thread Gregory Sharp
Hi, I've updated plastimatch version, could I get a new upload? There was a bug which I've fixed by adding --as-needed flag: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=748155 Yet, I am mystified.  When the dependency package (libinsighttoolkit4.5) was updated, there was no automatic

Re: Request sponsor plastimatch + one question

2014-05-20 Thread Gregory Sharp
On Mon, 19 May 2014 13:12:05 +0200 Andreas Tille ti...@debian.org wrote: Hi Gregory, On Sun, May 18, 2014 at 02:39:35PM -0700, Gregory Sharp wrote: Hi, I've updated plastimatch version, could I get a new upload? There was a bug which I've fixed by adding --as-needed flag: Since you

Question on binnmu process

2014-09-03 Thread Gregory Sharp
I have read and understood the bug report #759971 [1]. Thank you Andreas for responding. Now I have tried to educate myself on the procedures of binnmu. Going forward, it seems that my job is to look out for the resolution of #755539, and then send an email to debian-release with a binnmu

Re: Please help: failed build of plastimatch 1.5.16+dfsg-2 for several architectures

2014-11-18 Thread Gregory Sharp
Hi, Thanks so much for this! From: Andreas Tille andr...@an3as.eu To: debian-med@lists.debian.org Cc: Sent: Friday, November 14, 2014 8:05 AM Subject: Re: Please help: failed build of plastimatch 1.5.16+dfsg-2 for several architectures Hi Martin, On Fri, Nov 14, 2014 at

Re: Please help: failed build of plastimatch 1.5.16+dfsg-2 for several architectures

2014-11-23 Thread Gregory Sharp
Hello Martin, On Sun, 23 Nov 2014 10:23:22 +0100 Martin Steghöfer mar...@steghoefer.eu wrote: Gregory Sharp wrote: On Fri, Nov 14, 2014 at 01:36:40PM +0100, Martin Steghöfer wrote: Problem seems resolved to be resolved: https://bugs.debian.org/768769#47 Thanks. Please make sure

Re: Please help: failed build of plastimatch 1.5.16+dfsg-2 for several architectures

2014-12-01 Thread Gregory Sharp
On Mon, 01 Dec 2014 13:20:11 +0100 Martin Steghöfer mar...@steghoefer.eu wrote: Hi Martin, Regarding the remaining issues. There are still problems on 2 platforms, but they seem unrelated: 1. On arm64 it's BD-Uninstallable, which is because of a chain of uninstallables: gccxml - cableswig -

Re: camitk vs. mitk vs. slicer?

2015-02-24 Thread Gregory Sharp
On Mon, 23 Feb 2015 08:34:30 -0600 Steve M. Robbins st...@sumost.ca wrote: Thanks, Paul, On February 23, 2015 09:05:58 AM Paul Novotny wrote: I have not used mitk or camitk, so I can't answer your question directly. But I have had luck prototyping applications using itk and vtk in

Plastimatch ready for upload

2015-04-28 Thread Gregory Sharp
Hi, I've prepared the plastimatch version upgrade in the debian-med subversion. Please let me know if anything else I can/should be doing. Note: uscan still fails due to bug in tar #748244. Greg -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of unsubscribe.

Re: Plastimatch ready for upload

2015-05-04 Thread Gregory Sharp
Dear Andreas, Thank you for looking at the package. On Fri, 1 May 2015 23:50:37 +0200 Andreas Tille andr...@fam-tille.de wrote: Hi Gregory, On Tue, Apr 28, 2015 at 05:17:15PM -0400, Gregory Sharp wrote: I've prepared the plastimatch version upgrade in the debian-med subversion. Please

Re: Plastimatch ready for upload

2015-05-15 Thread Gregory Sharp
Hi Andreas, On Thu, 14 May 2015 18:58:34 +0200 Andreas Tille andr...@an3as.eu wrote: Cool! Thanks for these interesting changes! It was not clear to me whether it also fixes bug #778066 and thus I did not closed it. #778066 is not fixed. Unfortunately, the update did not go as well

Re: Plastimatch ready for upload

2015-05-13 Thread Gregory Sharp
Dear Andreas, On Mon, May 04, 2015 at 07:27:12PM -0400, Gregory Sharp wrote: Could you please explain your motivation to do the package that way? This was not intentional, therefore an error. Thank you for finding! I believe that I could fix by modifying the rules file. I

Re: Please update from ITK v3 to v4 [Re: RM: insighttoolkit -- ROM; Obsoleted by insighttoolkit4]

2015-08-18 Thread Gregory Sharp
On Wed, 12 Aug 2015 22:01:36 -0500 Steve M. Robbins st...@sumost.ca wrote: Hi, Previously on debian-med, I proposed that ITK v3 be dropped from the archive [1]. The only respondent agreed with that. So I filed for removal [2] and received notice that several packages still depend on ITK

Plastimatch update is ready

2015-07-29 Thread Gregory Sharp
Hi, A new update for plastimatch is complete, in my opinion is ready for sponsoring. The following issues were fixed and tested: - build problem on arm64, mips, etc resolved - gcc 5 issues resolved - remove obsolete copyrights - lintian warnings resolved Thank you, Greg -- To UNSUBSCRIBE,

Re: Insight toolkit dependency (2 questions)

2015-11-19 Thread Gregory Sharp
On Wed, 18 Nov 2015 17:54:27 -0600 "Steve M. Robbins" <st...@sumost.ca> wrote: > On November 18, 2015 01:59:32 PM Gregory Sharp wrote: > > [ ... ] > > My recollection is that the dependency resolver used by pbuilder is > different than that of the offi

Re: Plastimatch new version

2017-12-19 Thread Gregory Sharp
Hi Andreas, > For the next upstream version you might like to fix this: > > I: plastimatch: spelling-error-in-binary usr/lib/libplmbase.so.1.7 > Verticies Vertices I: plastimatch: spelling-error-in-binary > usr/lib/libplmbase.so.1.7 transfrom transform I: plastimatch: > spelling-error-in-binary

Updated plastimatch in salsa

2018-07-09 Thread Gregory Sharp
Hi, The plastimatch package in salsa was updated to the latest upstream release. May I please request upload? Thank you, Greg

Plastimatch new version

2020-03-19 Thread Gregory Sharp
Hi all,I have uploaded the new plastimatch version into Salsa.  Also the failing test case is now fixed.Thank you,Greg

New Plastimatch ready for upload

2021-01-21 Thread Gregory Sharp
I've pushed to salsa the new plastimatch upstream version and it is ready for upload. Thank you Andreas and Antoni for fixing the ITK issue earlier this year! Greg Sharp gregsh...@geocities.com

Re: DCM_DICT_DEFAULT_PATH

2022-06-15 Thread Gregory Sharp
. Am Tue, Jun 14, 2022 at 07:19:14PM + schrieb Gregory Sharp: > Hi Andreas, > > On Tuesday, June 14, 2022, 03:00:27 PM EDT, Andreas Tille > wrote: > > Am Tue, Jun 14, 2022 at 03:27:10PM +0000 schrieb Gregory Sharp: > > > > How best to p

Re: DCM_DICT_DEFAULT_PATH

2022-06-16 Thread Gregory Sharp
I pushed a new fix to salsa and tested. Dictionary now works as expected. Greg Sharp gregsh...@geocities.com On Thursday, June 16, 2022, 10:55:35 AM EDT, Gregory Sharp wrote: Hi Mathieu, There are some files put into /usr/share/dcmtk, but other files are put into /usr/share

Re: DCM_DICT_DEFAULT_PATH

2022-06-16 Thread Gregory Sharp
just adding Mathieu Malaterre explicitly in from.  Mathieu, you have > started the separate locations of the dic files.  It would help a lot if > you could comment on this thread. > > Kind regards >    Andreas. > > Am Wed, Jun 15, 2022 at 11:28:29PM + schrieb Gregory Sharp:

Plastimatch 1.9.4 second try

2022-11-22 Thread Gregory Sharp
Hi again, I have reverted the autopkgtest files and uploaded. Regarding Nilesh's suggestion of moving those upstream, it sounds like a good plan. The upstream tests use dynamically generated synthetic data, so it could eliminate the need for storing large binary files. We can do the same for

Re: Plastimatch new version

2022-11-18 Thread Gregory Sharp
: Hi Greg, Gregory Sharp, on 2022-11-17: > Just a ping. This is still ready for review and upload. Please let me know if > I missed something. Your mail provider seems to have filtered out [1], so I retry with my debian.org address (in case I broke something with my emlwks999.eu on

Re: Plastimatch new version

2022-11-17 Thread Gregory Sharp
Hi all, Just a ping. This is still ready for review and upload. Please let me know if I missed something. Thanks! Greg Sharp gregsh...@geocities.com On Thursday, November 3, 2022, 03:14:53 PM EDT, Gregory Sharp wrote: Happy Thursday everyone. I have updated plastimatch

Plastimatch new version

2022-11-03 Thread Gregory Sharp
Happy Thursday everyone. I have updated plastimatch for the new upstream version, and it is ready for review and upload. Thank you, Greg Sharp gregsh...@geocities.com