[med-svn] r11648 - in trunk/packages/genometools/trunk/debian: . patches

2012-07-09 Thread Sascha Steinbiss
/genometools/trunk/debian/control 2012-07-09 11:40:22 UTC (rev 11648) @@ -2,7 +2,9 @@ Section: science Priority: extra Maintainer: Sascha Steinbiss steinb...@zbh.uni-hamburg.de -Build-Depends: debhelper (= 7.0.50~), quilt, liblua5.1-0-dev, liblua5.1-lpeg-dev, liblua5.1-md5-dev, liblua5.1

[med-svn] r11649 - in trunk/packages/genometools/trunk/debian: . patches

2012-07-09 Thread Sascha Steinbiss
:35:27 UTC (rev 11649) @@ -1,3 +1,11 @@ +genometools (1.4.1-1) unstable; urgency=low + + * New upstream release (1.4.1) + * the GFF3 parser now handles children which are defined before their parents + * many small improvements to the GFF3 parser + + -- Sascha Steinbiss steinb...@zbh.uni

[med-svn] r11682 - trunk/packages/genometools/trunk/debian

2012-07-10 Thread Sascha Steinbiss
=== --- trunk/packages/genometools/trunk/debian/control 2012-07-10 08:25:54 UTC (rev 11681) +++ trunk/packages/genometools/trunk/debian/control 2012-07-10 08:41:25 UTC (rev 11682) @@ -3,8 +3,9 @@ Priority: extra Maintainer: Sascha Steinbiss steinb...@zbh.uni-hamburg.de Build

[med-svn] r11684 - in trunk/packages/genometools/trunk/debian: . patches

2012-07-10 Thread Sascha Steinbiss
Author: sascha-guest Date: 2012-07-10 09:09:19 + (Tue, 10 Jul 2012) New Revision: 11684 Added: trunk/packages/genometools/trunk/debian/patches/remove-gitignores Removed: trunk/packages/genometools/trunk/debian/patches/adding_soname.patch Modified:

[med-svn] r11685 - trunk/packages/genometools/trunk/debian

2012-07-10 Thread Sascha Steinbiss
Author: sascha-guest Date: 2012-07-10 09:34:49 + (Tue, 10 Jul 2012) New Revision: 11685 Modified: trunk/packages/genometools/trunk/debian/copyright Log: properly format copyright lines Modified: trunk/packages/genometools/trunk/debian/copyright

[med-svn] r11689 - trunk/packages/genometools/trunk/debian/patches

2012-07-10 Thread Sascha Steinbiss
Author: sascha-guest Date: 2012-07-10 12:53:15 + (Tue, 10 Jul 2012) New Revision: 11689 Modified: trunk/packages/genometools/trunk/debian/patches/adding_soname trunk/packages/genometools/trunk/debian/patches/libbam-fix Log: clean up some lintian issues Modified:

[med-svn] r11691 - trunk/packages/genometools/trunk/debian/patches

2012-07-10 Thread Sascha Steinbiss
Author: sascha-guest Date: 2012-07-10 13:10:13 + (Tue, 10 Jul 2012) New Revision: 11691 Added: trunk/packages/genometools/trunk/debian/patches/add-hardening Modified: trunk/packages/genometools/trunk/debian/patches/series Log: modify CFLAGS and friends for package building Added:

[med-svn] r11723 - trunk/packages/genometools/trunk/debian

2012-07-11 Thread Sascha Steinbiss
Author: sascha-guest Date: 2012-07-11 09:58:13 + (Wed, 11 Jul 2012) New Revision: 11723 Modified: trunk/packages/genometools/trunk/debian/rules Log: remove debug line Modified: trunk/packages/genometools/trunk/debian/rules

[med-svn] r11724 - in trunk/packages/genometools/trunk/debian: . patches

2012-07-11 Thread Sascha Steinbiss
-11 09:58:13 UTC (rev 11723) +++ trunk/packages/genometools/trunk/debian/control 2012-07-11 11:23:00 UTC (rev 11724) @@ -2,7 +2,7 @@ Section: science Priority: extra Maintainer: Sascha Steinbiss steinb...@zbh.uni-hamburg.de -Build-Depends: debhelper (= 7.0.50~), +Build-Depends: debhelper

[med-svn] r11725 - trunk/packages/genometools/trunk/debian

2012-07-11 Thread Sascha Steinbiss
Author: sascha-guest Date: 2012-07-11 11:25:17 + (Wed, 11 Jul 2012) New Revision: 11725 Modified: trunk/packages/genometools/trunk/debian/libgenometools0-dev.install Log: remove static lib from dev package Modified: trunk/packages/genometools/trunk/debian/libgenometools0-dev.install

[med-svn] r11726 - trunk/packages/genometools/trunk/debian

2012-07-11 Thread Sascha Steinbiss
Author: sascha-guest Date: 2012-07-11 11:28:33 + (Wed, 11 Jul 2012) New Revision: 11726 Added: trunk/packages/genometools/trunk/debian/libgenometools0-dev.links Removed: trunk/packages/genometools/trunk/debian/libgenometools0.links Log: move library symlink to dev package Added:

[med-svn] r11924 - trunk/packages/genometools/trunk/debian

2012-07-28 Thread Sascha Steinbiss
Gremme 2007-2012 Sascha Steinbiss 2004-2012 Stefan Bienert + 2010-2011 Joachim Bonnet 2007 David Ellinghaus + 2008 Johannes Fischer 2009-2012 Giorgio Gonnella 2007-2008 Thomas Jahns 2007 Malte Mader 2009 Brent Pedersen 2007 Christin

[med-svn] r11925 - trunk/packages/genometools/trunk/debian

2012-07-28 Thread Sascha Steinbiss
Author: sascha-guest Date: 2012-07-28 09:55:24 + (Sat, 28 Jul 2012) New Revision: 11925 Modified: trunk/packages/genometools/trunk/debian/genometools-common.install trunk/packages/genometools/trunk/debian/rules Log: make sure that cgilua is not installed Modified:

[med-svn] r12318 - in trunk/packages/genometools/trunk/debian: . patches

2012-10-05 Thread Sascha Steinbiss
(rev 12317) +++ trunk/packages/genometools/trunk/debian/changelog 2012-10-05 14:07:42 UTC (rev 12318) @@ -1,3 +1,9 @@ +genometools (1.4.2-1) unstable; urgency=low + + * New upstream release + + -- Sascha Steinbiss steinb...@zbh.uni-hamburg.de Fri, 05 Oct 2012 15:47:56 +0200 + genometools (1.4.1

[med-svn] r12319 - trunk/packages/genometools/trunk/debian

2012-10-06 Thread Sascha Steinbiss
://genometools.lighthouseapp.com/projects/17855-genometools/tickets/new +Contact: Sascha Steinbiss steinb...@zbh.uni-hamburg.de +Homepage: http://genometools.org +Repository: git://genometools.org/genometools.git +Watch: | + http://genometools.org/pub/genometools-([0-9.]+)\.tar\.gz

[med-svn] r12320 - in trunk/packages: . ltrsift ltrsift/trunk ltrsift/trunk/debian ltrsift/trunk/debian/source

2012-10-06 Thread Sascha Steinbiss
/packages/ltrsift/trunk/debian/changelog 2012-10-06 21:20:57 UTC (rev 12320) @@ -0,0 +1,5 @@ +ltrsift (1.0.1-1) UNRELEASED; urgency=low + + * Initial release (Closes: #) is the bug number of your ITP + + -- Sascha Steinbiss steinb...@zbh.uni-hamburg.de Sun, 06 Oct 2012 15:08:11

[med-svn] r12330 - trunk/packages/ltrsift/trunk/debian

2012-10-08 Thread Sascha Steinbiss
Author: sascha-guest Date: 2012-10-08 10:14:39 + (Mon, 08 Oct 2012) New Revision: 12330 Modified: trunk/packages/ltrsift/trunk/debian/control Log: move soft deps into Recommends Modified: trunk/packages/ltrsift/trunk/debian/control

[med-svn] r12332 - trunk/packages/ltrsift/trunk/debian

2012-10-08 Thread Sascha Steinbiss
Author: sascha-guest Date: 2012-10-08 13:12:31 + (Mon, 08 Oct 2012) New Revision: 12332 Modified: trunk/packages/ltrsift/trunk/debian/control Log: extend description Modified: trunk/packages/ltrsift/trunk/debian/control ===

[med-svn] r12334 - trunk/packages/ltrsift/trunk/debian

2012-10-08 Thread Sascha Steinbiss
number of your ITP + * Initial release (Closes: #689961) -- Sascha Steinbiss steinb...@zbh.uni-hamburg.de Sun, 06 Oct 2012 15:08:11 +0200 ___ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org

[med-svn] r12337 - trunk/packages/ltrsift/trunk/debian

2012-10-08 Thread Sascha Steinbiss
Author: sascha-guest Date: 2012-10-08 13:57:53 + (Mon, 08 Oct 2012) New Revision: 12337 Modified: trunk/packages/ltrsift/trunk/debian/watch Log: make watchfile return a tarball Modified: trunk/packages/ltrsift/trunk/debian/watch

[med-svn] r12351 - trunk/packages/genometools/trunk/debian

2012-10-09 Thread Sascha Steinbiss
shlibs.local file + + -- Sascha Steinbiss steinb...@zbh.uni-hamburg.de Tue, 09 Oct 2012 12:24:17 +0200 + +genometools (1.4.2-3) unstable; urgency=low + + * Build with pbuilder to obtain reasonable libc dependency (= 2.13) + + -- Sascha Steinbiss steinb...@zbh.uni-hamburg.de Tue, 09 Oct 2012 10:04

[med-svn] r12355 - trunk/packages/ltrsift/trunk/debian

2012-10-09 Thread Sascha Steinbiss
Author: sascha-guest Date: 2012-10-09 19:28:48 + (Tue, 09 Oct 2012) New Revision: 12355 Added: trunk/packages/ltrsift/trunk/debian/dirs trunk/packages/ltrsift/trunk/debian/ltrsift.desktop trunk/packages/ltrsift/trunk/debian/ltrsift.menu

[med-svn] r12374 - in trunk/packages/genometools/trunk/debian: . man

2012-10-10 Thread Sascha Steinbiss
Author: sascha-guest Date: 2012-10-10 22:20:53 + (Wed, 10 Oct 2012) New Revision: 12374 Added: trunk/packages/genometools/trunk/debian/man/gt-csa.1 Modified: trunk/packages/genometools/trunk/debian/control trunk/packages/genometools/trunk/debian/man/gt-fingerprint.1

[med-svn] r12375 - trunk/packages/genometools/trunk/debian

2012-10-10 Thread Sascha Steinbiss
Author: sascha-guest Date: 2012-10-10 23:32:05 + (Wed, 10 Oct 2012) New Revision: 12375 Added: trunk/packages/genometools/trunk/debian/genometools-doc.doc-base Modified: trunk/packages/genometools/trunk/debian/control trunk/packages/genometools/trunk/debian/genometools-doc.docs

[med-svn] r12381 - trunk/packages/ltrsift/trunk/debian

2012-10-11 Thread Sascha Steinbiss
Author: sascha-guest Date: 2012-10-11 09:08:27 + (Thu, 11 Oct 2012) New Revision: 12381 Added: trunk/packages/ltrsift/trunk/debian/ltrsift-examples.examples Removed: trunk/packages/ltrsift/trunk/debian/docs Modified: trunk/packages/ltrsift/trunk/debian/control

[med-svn] r12397 - trunk/packages/ltrsift/trunk/debian

2012-10-12 Thread Sascha Steinbiss
Author: sascha-guest Date: 2012-10-12 13:30:42 + (Fri, 12 Oct 2012) New Revision: 12397 Removed: trunk/packages/ltrsift/trunk/debian/DRAFT Log: remove DRAFT flag Deleted: trunk/packages/ltrsift/trunk/debian/DRAFT === ---

[med-svn] r12531 - trunk/packages/ltrsift/trunk/debian

2012-11-12 Thread Sascha Steinbiss
: 2012 Sascha Steinbiss steinb...@zbh.uni-hamburg.de - 2012 Sascha Kastens m...@skastens.de +Files: + * +Copyright: + 2012 Sascha Steinbiss steinb...@zbh.uni-hamburg.de + 2012 Sascha Kastens m...@skastens.de License: GPL-2+ This package is free software; you can redistribute

[med-svn] r12566 - trunk/packages/ltrsift/trunk/debian

2012-11-23 Thread Sascha Steinbiss
Author: sascha-guest Date: 2012-11-23 15:21:08 + (Fri, 23 Nov 2012) New Revision: 12566 Modified: trunk/packages/ltrsift/trunk/debian/watch Log: update watchfile with contributed version Modified: trunk/packages/ltrsift/trunk/debian/watch

[med-svn] r12914 - in trunk/packages/genometools/trunk/debian: . patches

2013-02-05 Thread Sascha Steinbiss
, GtEncseqCol added + * GtRankedList added + * GtSNPAnnotatorStream and `gt snpper' tool added + * node sorting code is now aware of MD5 hash presence + * compatibility with old Pango versions inproved + + -- Sascha Steinbiss steinb...@zbh.uni-hamburg.de Tue, 05 Feb 2013 18:52:22 +0100

[med-svn] r12975 - in trunk/packages: . aragorn aragorn/trunk aragorn/trunk/debian aragorn/trunk/debian/man aragorn/trunk/debian/patches aragorn/trunk/debian/source

2013-02-10 Thread Sascha Steinbiss
(1.2.34-1) unstable; urgency=low + + * Initial release (Closes: #) + + -- Sascha Steinbiss steinb...@zbh.uni-hamburg.de Wed, 06 Feb 2013 10:02:30 +0100 Added: trunk/packages/aragorn/trunk/debian/compat === --- trunk/packages/aragorn

[med-svn] r12976 - trunk/packages/aragorn/trunk/debian

2013-02-10 Thread Sascha Steinbiss
Author: sascha-guest Date: 2013-02-10 15:09:09 + (Sun, 10 Feb 2013) New Revision: 12976 Added: trunk/packages/aragorn/trunk/debian/DRAFT Log: add DRAFT file Added: trunk/packages/aragorn/trunk/debian/DRAFT === ---

[med-svn] r12977 - trunk/packages/genometools/trunk/debian

2013-02-10 Thread Sascha Steinbiss
Author: sascha-guest Date: 2013-02-10 20:25:51 + (Sun, 10 Feb 2013) New Revision: 12977 Added: trunk/packages/genometools/trunk/debian/python-genometools.install trunk/packages/genometools/trunk/debian/python-genometools.postinst

[med-svn] r12978 - trunk/packages/genometools/trunk/debian

2013-02-10 Thread Sascha Steinbiss
Author: sascha-guest Date: 2013-02-10 20:46:14 + (Sun, 10 Feb 2013) New Revision: 12978 Modified: trunk/packages/genometools/trunk/debian/control Log: remove DMUA flag Modified: trunk/packages/genometools/trunk/debian/control

[med-svn] r12979 - trunk/packages/ltrsift/trunk/debian

2013-02-10 Thread Sascha Steinbiss
Author: sascha-guest Date: 2013-02-10 20:47:19 + (Sun, 10 Feb 2013) New Revision: 12979 Modified: trunk/packages/ltrsift/trunk/debian/control Log: rm DMUA flag Modified: trunk/packages/ltrsift/trunk/debian/control === ---

[med-svn] r12985 - trunk/packages/genometools/trunk/debian

2013-02-12 Thread Sascha Steinbiss
Author: sascha-guest Date: 2013-02-12 13:38:37 + (Tue, 12 Feb 2013) New Revision: 12985 Modified: trunk/packages/genometools/trunk/debian/rules Log: simplify rules file for Python package Modified: trunk/packages/genometools/trunk/debian/rules

[med-svn] r12989 - trunk/packages/genometools/trunk/debian

2013-02-12 Thread Sascha Steinbiss
Author: sascha-guest Date: 2013-02-12 14:10:52 + (Tue, 12 Feb 2013) New Revision: 12989 Removed: trunk/packages/genometools/trunk/debian/python-genometools.install Modified: trunk/packages/genometools/trunk/debian/rules Log: get rid of obsolete .install file Deleted:

[med-svn] r13006 - trunk/packages/aragorn/trunk/debian

2013-02-14 Thread Sascha Steinbiss
Author: sascha-guest Date: 2013-02-14 12:38:03 + (Thu, 14 Feb 2013) New Revision: 13006 Removed: trunk/packages/aragorn/trunk/debian/aragorn.install Modified: trunk/packages/aragorn/trunk/debian/rules Log: remove need for .install file Deleted:

[med-svn] r13016 - trunk/packages/genometools/trunk/debian/patches

2013-02-16 Thread Sascha Steinbiss
Author: sascha-guest Date: 2013-02-16 15:46:10 + (Sat, 16 Feb 2013) New Revision: 13016 Added: trunk/packages/genometools/trunk/debian/patches/split_manuals Modified: trunk/packages/genometools/trunk/debian/patches/series Log: split manuals (LaTeX fails to finish correctly on some

[med-svn] r13017 - trunk/packages/genometools/trunk/debian

2013-02-16 Thread Sascha Steinbiss
includecomment/excludecomment + + -- Sascha Steinbiss steinb...@zbh.uni-hamburg.de Sat, 16 Feb 2013 16:58:11 +0100 + genometools (1.5.0-1) unstable; urgency=low * New upstream release ___ debian-med-commit mailing list debian-med-commit

[med-svn] r13048 - trunk/packages/ltrsift/trunk/debian

2013-02-19 Thread Sascha Steinbiss
Author: sascha-guest Date: 2013-02-19 14:10:21 + (Tue, 19 Feb 2013) New Revision: 13048 Modified: trunk/packages/ltrsift/trunk/debian/rules Log: re-enable optimized build Modified: trunk/packages/ltrsift/trunk/debian/rules

[med-svn] r13066 - in trunk/packages/aragorn/trunk/debian: . man patches

2013-02-23 Thread Sascha Steinbiss
2013-02-23 09:50:24 UTC (rev 13065) +++ trunk/packages/aragorn/trunk/debian/changelog 2013-02-23 09:50:39 UTC (rev 13066) @@ -1,5 +1,5 @@ -aragorn (1.2.34-1) unstable; urgency=low +aragorn (1.2.36-1) unstable; urgency=low * Initial release (Closes: #) - -- Sascha Steinbiss

[med-svn] r13067 - in trunk/packages/aragorn/trunk/debian: . man

2013-02-23 Thread Sascha Steinbiss
Author: sascha-guest Date: 2013-02-23 11:31:12 + (Sat, 23 Feb 2013) New Revision: 13067 Modified: trunk/packages/aragorn/trunk/debian/man/aragorn.1 trunk/packages/aragorn/trunk/debian/manpage.1.src Log: improve man page Modified: trunk/packages/aragorn/trunk/debian/man/aragorn.1

[med-svn] r13100 - in trunk/packages/aragorn/trunk/debian: . man

2013-02-24 Thread Sascha Steinbiss
Author: sascha-guest Date: 2013-02-24 16:04:15 + (Sun, 24 Feb 2013) New Revision: 13100 Modified: trunk/packages/aragorn/trunk/debian/man/aragorn.1 trunk/packages/aragorn/trunk/debian/manpage.1.src Log: minor manpage changes Modified: trunk/packages/aragorn/trunk/debian/man/aragorn.1

[med-svn] r13106 - trunk/packages/aragorn/trunk/debian

2013-02-24 Thread Sascha Steinbiss
release (Closes: #701571) -- Sascha Steinbiss steinb...@zbh.uni-hamburg.de Wed, 16 Feb 2013 10:02:30 +0100 ___ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med

[med-svn] r13121 - trunk/packages/aragorn/trunk/debian

2013-03-02 Thread Sascha Steinbiss
Author: sascha-guest Date: 2013-03-02 19:52:00 + (Sat, 02 Mar 2013) New Revision: 13121 Modified: trunk/packages/aragorn/trunk/debian/get-orig-source Log: fix orig-source handling Modified: trunk/packages/aragorn/trunk/debian/get-orig-source

[med-svn] r13122 - in trunk/packages/aragorn/trunk/debian: . man

2013-03-02 Thread Sascha Steinbiss
/control 2013-03-02 20:00:25 UTC (rev 13122) @@ -3,7 +3,7 @@ Priority: optional Maintainer: Debian Med Packaging Team debian-med-packag...@lists.alioth.debian.org Uploaders: Sascha Steinbiss steinb...@zbh.uni-hamburg.de -Build-Depends: debhelper (= 9), hardening-includes +Build-Depends

[med-svn] r13123 - trunk/packages/aragorn/trunk/debian

2013-03-03 Thread Sascha Steinbiss
Author: sascha-guest Date: 2013-03-03 15:52:21 + (Sun, 03 Mar 2013) New Revision: 13123 Modified: trunk/packages/aragorn/trunk/debian/rules Log: Fix problem with manpage generation. Modified: trunk/packages/aragorn/trunk/debian/rules

[med-svn] r13124 - trunk/packages/aragorn/trunk/debian

2013-03-03 Thread Sascha Steinbiss
...@lists.alioth.debian.org Uploaders: Sascha Steinbiss steinb...@zbh.uni-hamburg.de -Build-Depends: debhelper (= 9), hardening-includes, asciidoc +Build-Depends: debhelper (= 9), hardening-includes, asciidoc, libxml2-utils, xsltproc Standards-Version: 3.9.4 Homepage: http://mbio-serv2

[med-svn] r13125 - trunk/packages/aragorn/trunk/debian

2013-03-03 Thread Sascha Steinbiss
Author: sascha-guest Date: 2013-03-03 16:14:11 + (Sun, 03 Mar 2013) New Revision: 13125 Modified: trunk/packages/aragorn/trunk/debian/upstream Log: remove 'Watch' entry in upstream file Modified: trunk/packages/aragorn/trunk/debian/upstream

[med-svn] r13127 - trunk/packages/aragorn/trunk/debian

2013-03-03 Thread Sascha Steinbiss
Author: sascha-guest Date: 2013-03-03 17:24:16 + (Sun, 03 Mar 2013) New Revision: 13127 Removed: trunk/packages/aragorn/trunk/debian/patches/ Log: remove obsolete patch directory ___ debian-med-commit mailing list

[med-svn] r13128 - trunk/packages/aragorn/trunk/debian

2013-03-03 Thread Sascha Steinbiss
Author: sascha-guest Date: 2013-03-03 19:01:21 + (Sun, 03 Mar 2013) New Revision: 13128 Added: trunk/packages/aragorn/trunk/debian/watch Removed: trunk/packages/aragorn/trunk/debian/aragorn.manpages Modified: trunk/packages/aragorn/trunk/debian/rules Log: adjust packaging to updated

[med-svn] r13129 - trunk/packages/aragorn/trunk/debian

2013-03-03 Thread Sascha Steinbiss
Uploaders: Sascha Steinbiss steinb...@zbh.uni-hamburg.de -Build-Depends: debhelper (= 9), hardening-includes, asciidoc, libxml2-utils, xsltproc +Build-Depends: debhelper (= 9), hardening-includes Standards-Version: 3.9.4 Homepage: http://mbio-serv2.mbioekol.lu.se/ARAGORN/ Vcs-Browser: http

[med-svn] r13130 - trunk/packages/aragorn/trunk/debian

2013-03-03 Thread Sascha Steinbiss
Author: sascha-guest Date: 2013-03-03 19:26:47 + (Sun, 03 Mar 2013) New Revision: 13130 Removed: trunk/packages/aragorn/trunk/debian/get-orig-source trunk/packages/aragorn/trunk/debian/man/ Log: remove more obsolete files Deleted: trunk/packages/aragorn/trunk/debian/get-orig-source

[med-svn] r13135 - in trunk/packages/genometools/trunk/debian: . patches

2013-03-04 Thread Sascha Steinbiss
Priority: optional -Maintainer: Debian Med Packaging Team debian-med-packag...@lists.alioth.debian.org +Maintainer: Debian Med Packaging Team debian-med-packag...@lists.alioth.debian.org Uploaders: Sascha Steinbiss steinb...@zbh.uni-hamburg.de Build-Depends: debhelper (= 9), liblua5.1-0-dev

[med-svn] r13156 - trunk/packages/genometools/trunk/debian

2013-03-07 Thread Sascha Steinbiss
. + + -- Sascha Steinbiss steinb...@zbh.uni-hamburg.de Thu, 07 Mar 2013 14:08:05 +0100 + genometools (1.5.0-2) unstable; urgency=low * Patch manuals not to use includecomment/excludecomment ___ debian-med-commit mailing list debian-med-commit

[med-svn] r13162 - trunk/packages/ltrsift/trunk/debian

2013-03-09 Thread Sascha Steinbiss
Author: sascha-guest Date: 2013-03-09 10:15:35 + (Sat, 09 Mar 2013) New Revision: 13162 Modified: trunk/packages/ltrsift/trunk/debian/watch Log: update watchfile Modified: trunk/packages/ltrsift/trunk/debian/watch === ---

[med-svn] r13163 - trunk/packages/ltrsift/trunk/debian

2013-03-09 Thread Sascha Steinbiss
=== --- trunk/packages/ltrsift/trunk/debian/changelog 2013-03-09 10:15:35 UTC (rev 13162) +++ trunk/packages/ltrsift/trunk/debian/changelog 2013-03-09 10:28:29 UTC (rev 13163) @@ -1,3 +1,9 @@ +ltrsift (1.0.1-2) unstable; urgency=low + + * enable optimization and hardening + + -- Sascha

[med-svn] r13168 - trunk/packages/ltrsift/trunk/debian

2013-03-11 Thread Sascha Steinbiss
=== --- trunk/packages/ltrsift/trunk/debian/changelog 2013-03-10 10:39:50 UTC (rev 13167) +++ trunk/packages/ltrsift/trunk/debian/changelog 2013-03-11 12:40:20 UTC (rev 13168) @@ -1,3 +1,9 @@ +ltrsift (1.0.2-1) unstable; urgency=low + + * New upstream release + + -- Sascha

[med-svn] r13177 - trunk/packages/ltrsift/trunk/debian

2013-03-12 Thread Sascha Steinbiss
@@ Source: ltrsift Section: science -Priority: optional +Priority: optional Maintainer: Debian Med Packaging Team debian-med-packag...@lists.alioth.debian.org Uploaders: Sascha Steinbiss steinb...@zbh.uni-hamburg.de Build-Depends: debhelper (= 9), libgenometools0-dev (= 1.4.2), libgtk2.0-dev

[med-svn] r15069 - trunk/packages/genometools/trunk/debian

2013-10-30 Thread Sascha Steinbiss
/17855-genometools/tickets/new Contact: Sascha Steinbiss steinb...@zbh.uni-hamburg.de Homepage: http://genometools.org +Reference: + Author: Gremme, Gordon and Steinbiss, Sascha and Kurtz, Stefan + Title: + GenomeTools: a comprehensive software library for efficient processing of structured

[med-svn] r15111 - in trunk/packages/aragorn/trunk/debian: . patches

2013-11-05 Thread Sascha Steinbiss
/trunk/debian/changelog 2013-11-05 16:29:17 UTC (rev 15111) @@ -1,3 +1,10 @@ +aragorn (1.2.36-2) unstable; urgency=low + + * Adjust weekday in changelog (fixes lintian warning) + * Fix spelling error in manpage + + -- Sascha Steinbiss steinb...@zbh.uni-hamburg.de Tue, 05 Nov 2013 15:22:41

[med-svn] r15124 - trunk/packages/genometools/trunk/debian

2013-11-06 Thread Sascha Steinbiss
bin/examples/sketch_parsed_with_* are built + - Enable compiler optimization + * debian/control + - Move libgenometools0 package into libs section + - Switch pango deps to new package + - Add ruby builddep, required for the testsuite + + -- Sascha Steinbiss steinb...@zbh.uni

[med-svn] r16907 - in trunk/packages/genometools/trunk/debian: . patches

2014-05-10 Thread Sascha Steinbiss
+9,10 @@ - Move libgenometools0 package into libs section - Switch pango deps to new package - Add ruby builddep, required for the testsuite + * Fix compilation on mips64/mips64el +Closes: #747431 - -- Sascha Steinbiss steinb...@zbh.uni-hamburg.de Wed, 06 Nov 2013 14:28:41

[med-svn] r16938 - in trunk/packages/genometools/tags: . 1.5.1-3

2014-05-15 Thread Sascha Steinbiss
Author: sascha-guest Date: 2014-05-15 09:45:47 + (Thu, 15 May 2014) New Revision: 16938 Added: trunk/packages/genometools/tags/1.5.1-3/ trunk/packages/genometools/tags/1.5.1-3/debian/ Removed: trunk/packages/genometools/tags/1.5.1-3/debian/ Log: [svn-buildpackage] Tagging genometools

[med-svn] r16939 - trunk/packages/genometools/tags

2014-05-15 Thread Sascha Steinbiss
Author: sascha-guest Date: 2014-05-15 09:48:13 + (Thu, 15 May 2014) New Revision: 16939 Removed: trunk/packages/genometools/tags/1.5.1-3/ Log: [svn-buildpackage] Removing old tag genometools-1.5.1-3 ___ debian-med-commit mailing list

[med-svn] r16940 - trunk/packages/genometools/tags

2014-05-15 Thread Sascha Steinbiss
Author: sascha-guest Date: 2014-05-15 09:48:13 + (Thu, 15 May 2014) New Revision: 16940 Added: trunk/packages/genometools/tags/1.5.1-3/ Log: [svn-buildpackage] Tagging genometools 1.5.1-3 ___ debian-med-commit mailing list

[med-svn] r16949 - trunk/packages/genometools/tags

2014-05-15 Thread Sascha Steinbiss
Author: sascha-guest Date: 2014-05-15 14:30:23 + (Thu, 15 May 2014) New Revision: 16949 Added: trunk/packages/genometools/tags/1.5.2-1/ Log: [svn-buildpackage] Tagging genometools 1.5.2-1 ___ debian-med-commit mailing list

[med-svn] r16950 - in trunk/packages/genometools/trunk/debian: . patches

2014-05-15 Thread Sascha Steinbiss
-05-15 14:30:23 UTC (rev 16949) +++ trunk/packages/genometools/trunk/debian/changelog 2014-05-15 22:25:00 UTC (rev 16950) @@ -1,3 +1,9 @@ +genometools (1.5.2-2) unstable; urgency=low + + * Split manuals into separate documents to avoid strange LaTeX build issues. + + -- Sascha Steinbiss sa

[med-svn] r16952 - trunk/packages/genometools/trunk/debian

2014-05-16 Thread Sascha Steinbiss
build issues. - -- Sascha Steinbiss sa...@tetrinetsucht.de Thu, 15 May 2014 23:23:20 + + -- Sascha Steinbiss steinb...@zbh.uni-hamburg.de Thu, 15 May 2014 23:23:20 + genometools (1.5.2-1) unstable; urgency=low ___ debian-med-commit mailing

[med-svn] r16953 - in trunk/packages/genometools/tags: . 1.5.2-2/debian

2014-05-16 Thread Sascha Steinbiss
/debian/changelog2014-05-16 22:58:13 UTC (rev 16953) @@ -1,112 +0,0 @@ -genometools (1.5.2-2) unstable; urgency=low - - * Split manuals into separate documents to avoid strange LaTeX build issues. - - -- Sascha Steinbiss sa...@tetrinetsucht.de Thu, 15 May 2014 23:23:20 + - -genometools

[med-svn] r16959 - in trunk/packages/genometools/trunk/debian: . patches

2014-05-19 Thread Sascha Steinbiss
) unstable; urgency=low + + * Address building issues on s390x, powerpc and armhf + * Don't use -m64 for arm64 (thanks to Logan Rosen) +Closes: #748708 + * Build-depend on docbook-xsl to fix FTBFS while offline (thanks to Logan Rosen) +Closes: #748709 + + -- Sascha Steinbiss steinb

[med-svn] r16960 - in trunk/packages/genometools/trunk/debian: . patches

2014-05-19 Thread Sascha Steinbiss
FTBFS while offline (thanks to +Logan Rosen) Closes: #748709 -- Sascha Steinbiss steinb...@zbh.uni-hamburg.de Mon, 19 May 2014 23:06:34 + Modified: trunk/packages/genometools/trunk/debian/patches/arm64-no-m64

[med-svn] r16961 - trunk/packages/genometools/trunk/debian/patches

2014-05-19 Thread Sascha Steinbiss
code to work with char being unsigned by default. +Author: Sascha Steinbiss steinb...@zbh.uni-hamburg.de --- a/src/core/safearith.c +++ b/src/core/safearith.c @@ -182,8 +182,10 @@ ___ debian-med-commit mailing list debian-med-commit

[med-svn] r17004 - in trunk/packages/genometools/tags: . 1.5.2-4/debian 1.5.2-4/debian/patches

2014-05-24 Thread Sascha Steinbiss
) unstable; urgency=low - - * Address building issues on s390x, powerpc and armhf - * Don't use -m64 for arm64 (thanks to Logan Rosen) -Closes: #748708 - * Build-depend on docbook-xsl to fix FTBFS while offline (thanks to -Logan Rosen) -Closes: #748709 - - -- Sascha Steinbiss steinb

[med-svn] r17477 - in trunk/packages/genometools/trunk/debian: . patches

2014-07-16 Thread Sascha Steinbiss
/changelog 2014-07-16 20:12:56 UTC (rev 17477) @@ -1,3 +1,9 @@ +genometools (1.5.3-1) unstable; urgency=low + + * New upstream release. + + -- Sascha Steinbiss sas...@steinbiss.name Wed, 16 Jul 2014 20:32:19 +0100 + genometools (1.5.2-4) unstable; urgency=low * Incorporate patches addressing type

[med-svn] r17478 - trunk/packages/aragorn/trunk/debian

2014-07-16 Thread Sascha Steinbiss
+ + * hardening-includes = use dpkg-buildflags instead + * debian/control: Update vcs field + * debian/control: Update standards version + + -- Sascha Steinbiss sas...@steinbiss.name Wed, 16 Jul 2014 21:56:49 +0100 + aragorn (1.2.36-2) unstable; urgency=low * Adjust weekday in changelog

[med-svn] r17479 - in trunk/packages/aragorn/trunk/debian: . patches

2014-07-16 Thread Sascha Steinbiss
) @@ -1,3 +1,10 @@ +aragorn (1.2.36-4) unstable; urgency=low + + * Fix hardening flags + * Add patch description + + -- Sascha Steinbiss sas...@steinbiss.name Wed, 16 Jul 2014 23:29:34 +0100 + aragorn (1.2.36-3) unstable; urgency=low * hardening-includes = use dpkg-buildflags instead Modified

[med-svn] r17943 - trunk/packages/genometools/trunk/debian/patches

2014-09-05 Thread Sascha Steinbiss
Author: sascha-guest Date: 2014-09-05 08:46:47 + (Fri, 05 Sep 2014) New Revision: 17943 Modified: trunk/packages/genometools/trunk/debian/patches/series Log: re-include missing patch Modified: trunk/packages/genometools/trunk/debian/patches/series

[med-svn] r17947 - trunk/packages/genometools/trunk/debian

2014-09-05 Thread Sascha Steinbiss
. + + -- Sascha Steinbiss sas...@steinbiss.name Fri, 05 Sep 2014 14:23:31 +0100 + genometools (1.5.3-1) unstable; urgency=low * New upstream release. ___ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org

[med-svn] r18468 - trunk/packages/aegean/trunk/debian

2014-11-11 Thread Sascha Steinbiss
: Sascha Steinbiss sas...@steinbiss.name Section: science Priority: optional -Maintainer: Debian Med Packaging Team debian-med-packag...@lists.alioth.debian.org -Uploaders: Sascha Steinbiss sas...@steinbiss.name -Build-Depends: debhelper (= 9), libcairo2-dev, libgenometools0-dev (= 1.5.1

[med-svn] r18469 - trunk/packages/aegean/trunk/debian

2014-11-11 Thread Sascha Steinbiss
- * Initial release (Closes: #xxx) + * Initial release (Closes: #769162) - -- Sascha Steinbiss sas...@steinbiss.name Sat, 08 Mar 2014 11:08:11 + + -- Sascha Steinbiss sas...@steinbiss.name Tue, 11 Nov 2014 11:14:11 + ___ debian-med-commit mailing

[med-svn] r18470 - trunk/packages/aegean/trunk/debian/patches

2014-11-11 Thread Sascha Steinbiss
Author: sascha-guest Date: 2014-11-11 23:10:03 + (Tue, 11 Nov 2014) New Revision: 18470 Modified: trunk/packages/aegean/trunk/debian/patches/add_hardening trunk/packages/aegean/trunk/debian/patches/add_version trunk/packages/aegean/trunk/debian/patches/includepaths

[med-svn] r18474 - trunk/packages/aegean/trunk/debian

2014-11-12 Thread Sascha Steinbiss
Author: sascha-guest Date: 2014-11-12 08:57:45 + (Wed, 12 Nov 2014) New Revision: 18474 Modified: trunk/packages/aegean/trunk/debian/control trunk/packages/aegean/trunk/debian/copyright Log: clean trailing whitespace Modified: trunk/packages/aegean/trunk/debian/control

[med-svn] r18477 - trunk/packages/aegean/trunk/debian/patches

2014-11-12 Thread Sascha Steinbiss
Author: sascha-guest Date: 2014-11-12 09:51:53 + (Wed, 12 Nov 2014) New Revision: 18477 Added: trunk/packages/aegean/trunk/debian/patches/fix_m64_on_some_archs Modified: trunk/packages/aegean/trunk/debian/patches/series Log: address -m64 on (ia64, alpha, mips64, mips64el, aarch64)

[med-svn] r18478 - trunk/packages/aegean/trunk/debian/patches

2014-11-12 Thread Sascha Steinbiss
Author: sascha-guest Date: 2014-11-12 13:48:06 + (Wed, 12 Nov 2014) New Revision: 18478 Modified: trunk/packages/aegean/trunk/debian/patches/fix_m64_on_some_archs Log: cme fix dpkg Modified: trunk/packages/aegean/trunk/debian/patches/fix_m64_on_some_archs

[med-svn] r18485 - trunk/packages/aegean

2014-11-15 Thread Sascha Steinbiss
Author: sascha-guest Date: 2014-11-15 11:11:51 + (Sat, 15 Nov 2014) New Revision: 18485 Added: trunk/packages/aegean/tags/ Log: create tags dir ___ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org

[med-svn] r18486 - trunk/packages/aegean/tags

2014-11-15 Thread Sascha Steinbiss
Author: sascha-guest Date: 2014-11-15 11:12:32 + (Sat, 15 Nov 2014) New Revision: 18486 Added: trunk/packages/aegean/tags/0.10.2-1/ Log: [svn-buildpackage] Tagging aegean 0.10.2-1 ___ debian-med-commit mailing list

[med-svn] r18487 - in trunk/packages: . barrnap barrnap/trunk barrnap/trunk/debian barrnap/trunk/debian/man barrnap/trunk/debian/patches barrnap/trunk/debian/source

2014-11-16 Thread Sascha Steinbiss
/control 2014-11-16 22:06:13 UTC (rev 18487) @@ -0,0 +1,23 @@ +Source: barrnap +Section: science +Priority: optional +Maintainer: Debian Med Packaging Team debian-med-packag...@lists.alioth.debian.org +Uploaders: Sascha Steinbiss sas...@steinbiss.name +Build-Depends: debhelper (= 9.0.0), hmmer (= 3.1

[med-svn] r18491 - in trunk/packages/ltrsift/trunk/debian: . patches

2014-11-18 Thread Sascha Steinbiss
/debian/changelog 2014-11-18 19:27:06 UTC (rev 18490) +++ trunk/packages/ltrsift/trunk/debian/changelog 2014-11-18 20:17:40 UTC (rev 18491) @@ -1,3 +1,16 @@ +ltrsift (1.0.2-3) unstable; urgency=low + + * include patches + + -- Sascha Steinbiss sas...@steinbiss.name Tue, 18 Nov 2014

[med-svn] r18492 - in trunk/packages/aegean/trunk/debian: . patches

2014-11-18 Thread Sascha Steinbiss
Author: sascha-guest Date: 2014-11-18 20:31:45 + (Tue, 18 Nov 2014) New Revision: 18492 Modified: trunk/packages/aegean/trunk/debian/changelog trunk/packages/aegean/trunk/debian/copyright trunk/packages/aegean/trunk/debian/patches/series trunk/packages/aegean/trunk/debian/rules

[med-svn] r18493 - trunk/packages/aegean/trunk/debian

2014-11-20 Thread Sascha Steinbiss
Author: sascha-guest Date: 2014-11-20 22:48:08 + (Thu, 20 Nov 2014) New Revision: 18493 Modified: trunk/packages/aegean/trunk/debian/copyright Log: d/copyright: add GPL2 Modified: trunk/packages/aegean/trunk/debian/copyright

[med-svn] r18494 - trunk/packages/aegean/trunk/debian

2014-11-20 Thread Sascha Steinbiss
Author: sascha-guest Date: 2014-11-20 22:55:01 + (Thu, 20 Nov 2014) New Revision: 18494 Modified: trunk/packages/aegean/trunk/debian/copyright Log: d/copyright: split License: fields Modified: trunk/packages/aegean/trunk/debian/copyright

[med-svn] r18520 - trunk/packages/barrnap/trunk/debian

2014-11-29 Thread Sascha Steinbiss
+Section: non-free/science Priority: optional Maintainer: Debian Med Packaging Team debian-med-packag...@lists.alioth.debian.org Uploaders: Sascha Steinbiss sas...@steinbiss.name @@ -11,7 +11,7 @@ Package: barrnap Architecture: all -Depends: ${shlibs:Depends}, ${misc:Depends}, hmmer (= 3.1

[med-svn] r18530 - in trunk/packages/genometools/trunk/debian: . patches

2014-12-12 Thread Sascha Steinbiss
(1.5.4-1) experimental; urgency=low + + * New upstream release. + + -- Sascha Steinbiss sas...@steinbiss.name Fri, 12 Dec 2014 12:06:42 + + genometools (1.5.3-2) unstable; urgency=low - * Reactivate missing patch. + * Reactivate missing patch. -- Sascha Steinbiss sas...@steinbiss.name

[med-svn] r18531 - trunk/packages/genometools/trunk/debian

2014-12-12 Thread Sascha Steinbiss
Author: sascha-guest Date: 2014-12-12 20:42:22 + (Fri, 12 Dec 2014) New Revision: 18531 Modified: trunk/packages/genometools/trunk/debian/copyright Log: add machine readable licenses Modified: trunk/packages/genometools/trunk/debian/copyright

[med-svn] r18532 - trunk/packages/genometools/trunk/debian

2014-12-12 Thread Sascha Steinbiss
Author: sascha-guest Date: 2014-12-12 20:52:10 + (Fri, 12 Dec 2014) New Revision: 18532 Modified: trunk/packages/genometools/trunk/debian/copyright Log: clean up d/copyright Modified: trunk/packages/genometools/trunk/debian/copyright

[med-svn] r18533 - trunk/packages/genometools/trunk/debian

2014-12-12 Thread Sascha Steinbiss
- 2007-2013 Sascha Steinbiss + 2001-2014 Stefan Kurtz + 2003-2014 Gordon Gremme + 2007-2014 Sascha Steinbiss 2004-2012 Stefan Bienert 2010-2011 Joachim Bonnet 2007 David Ellinghaus 2008 Johannes Fischer - 2009-2013 Giorgio Gonnella + 2009-2014 Giorgio Gonnella

[med-svn] r18534 - trunk/packages/genometools/trunk/debian

2014-12-12 Thread Sascha Steinbiss
Author: sascha-guest Date: 2014-12-12 21:09:42 + (Fri, 12 Dec 2014) New Revision: 18534 Modified: trunk/packages/genometools/trunk/debian/control Log: update standards-version Modified: trunk/packages/genometools/trunk/debian/control

[med-svn] r18652 - trunk/packages/barrnap/trunk/debian

2015-01-30 Thread Sascha Steinbiss
Author: sascha-guest Date: 2015-01-30 22:00:46 + (Fri, 30 Jan 2015) New Revision: 18652 Modified: trunk/packages/barrnap/trunk/debian/control Log: lintian fixes Modified: trunk/packages/barrnap/trunk/debian/control === ---

[med-svn] r18651 - trunk/packages/barrnap/trunk/debian

2015-01-30 Thread Sascha Steinbiss
Uploaders: Sascha Steinbiss sas...@steinbiss.name -Build-Depends: debhelper (= 9.0.0), hmmer (= 3.1), lua5.1, dh-exec +Build-Depends: debhelper (= 9.0.0), hmmer (= 3.1), lua5.1 Standards-Version: 3.9.6 Homepage: http://www.vicbioinformatics.com/software.barrnap.shtml Vcs-Browser: http

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