[med-svn] r6840 - in trunk/packages/smile/trunk: . debian debian/patches debian/source

2011-05-19 Thread Thorsten Alteholz
/README.Debian 2011-05-19 18:12:13 UTC (rev 6840) @@ -1,6 +1,11 @@ smile for Debian + As there is a multimedia package with the same name, I renamed this package + to biosmile. + + -- Thorsten Alteholz deb...@alteholz.de, Wed, 18 May 2011 18:20:05 +0200 + Renamed SMILE to smile

[med-svn] r6894 - in trunk/packages/ginkgocadx/trunk/debian: . patches

2011-05-30 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-05-30 17:40:39 + (Mon, 30 May 2011) New Revision: 6894 Added: trunk/packages/ginkgocadx/trunk/debian/patches/spelling.patch Modified: trunk/packages/ginkgocadx/trunk/debian/ trunk/packages/ginkgocadx/trunk/debian/patches/series Log: spelling

[med-svn] r6895 - in trunk/packages/smile/trunk/debian: . patches

2011-05-30 Thread Thorsten Alteholz
/packages/smile/trunk/debian/README.Debian 2011-05-30 18:05:14 UTC (rev 6895) @@ -2,7 +2,7 @@ As there is a multimedia package with the same name, I renamed this package - to biosmile. + to mlv-smile. -- Thorsten Alteholz deb...@alteholz.de, Wed, 18 May 2011 18:20

[med-svn] r6899 - trunk/packages/ginkgocadx/trunk/debian

2011-05-31 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-05-31 18:13:10 + (Tue, 31 May 2011) New Revision: 6899 Modified: trunk/packages/ginkgocadx/trunk/debian/copyright Log: some copyright progress Modified: trunk/packages/ginkgocadx/trunk/debian/copyright

[med-svn] r6904 - trunk/packages/ginkgocadx/trunk/debian

2011-06-01 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-06-01 17:33:20 + (Wed, 01 Jun 2011) New Revision: 6904 Modified: trunk/packages/ginkgocadx/trunk/debian/copyright Log: more copyright stuff Modified: trunk/packages/ginkgocadx/trunk/debian/copyright

[med-svn] r6905 - trunk/packages/mgltools

2011-06-01 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-06-01 17:35:43 + (Wed, 01 Jun 2011) New Revision: 6905 Modified: trunk/packages/mgltools/BUILD Log: update -d reveals the missing directories Modified: trunk/packages/mgltools/BUILD === ---

[med-svn] r6910 - trunk/packages/ginkgocadx/trunk/debian

2011-06-04 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-06-04 16:45:23 + (Sat, 04 Jun 2011) New Revision: 6910 Modified: trunk/packages/ginkgocadx/trunk/debian/copyright Log: copyright file almost finished Modified: trunk/packages/ginkgocadx/trunk/debian/copyright

[med-svn] r6911 - trunk/packages/ginkgocadx/trunk/debian

2011-06-04 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-06-04 17:55:02 + (Sat, 04 Jun 2011) New Revision: 6911 Modified: trunk/packages/ginkgocadx/trunk/debian/copyright Log: LGPL for base64.h Modified: trunk/packages/ginkgocadx/trunk/debian/copyright

[med-svn] r6913 - in trunk/packages/dotur/trunk/debian: . manpages.d patches

2011-06-04 Thread Thorsten Alteholz
Wed, 02 Mar 2011 23:48:37 +0100 + -- Thorsten Alteholz deb...@alteholz.de Fri, 03 Jun 2011 16:00:00 +0200 Modified: trunk/packages/dotur/trunk/debian/control === --- trunk/packages/dotur/trunk/debian/control 2011-06-04 18:02:04

[med-svn] r6920 - in trunk/packages/mgltools: dejavu/trunk/debian mslib/trunk/debian networkeditor/trunk/debian pyautodock/trunk/debian pybabel/trunk/debian qslimlib/trunk/debian support/trunk/debian

2011-06-06 Thread Thorsten Alteholz
-Upload-Allowed: no +DM-Upload-Allowed: yes XS-Autobuild: no Uploaders: Steffen Moeller moel...@debian.org, Sargis Dallakyan sar...@scripps.edu, Thorsten Alteholz deb...@alteholz.de Build-Depends: debhelper (= 5.0.38), python-central (= 0.5.6), cdbs (= 0.4), python-all-dev @@ -15,4 +15,6

[med-svn] r6929 - trunk/packages/dotur/trunk/debian

2011-06-07 Thread Thorsten Alteholz
: #629439) -- Thorsten Alteholz deb...@alteholz.de Fri, 03 Jun 2011 16:00:00 +0200 ___ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit

[med-svn] r6947 - in trunk/packages/mgltools: networkeditor/trunk/debian pmv/trunk/debian pmv/trunk/debian/patches pyautodock/trunk/debian pybabel/trunk/debian symserv/trunk/debian utpackages/trunk/de

2011-06-08 Thread Thorsten Alteholz
-06-08 18:12:23 UTC (rev 6947) @@ -5,7 +5,7 @@ DM-Upload-Allowed: yes XS-Autobuild: yes Uploaders: Steffen Moeller moel...@debian.org, Sargis Dallakyan sar...@scripps.edu, Thorsten Alteholz deb...@alteholz.de -Build-Depends: debhelper (= 8), python-all-dev (= 2.6) +Build-Depends: debhelper (= 8

[med-svn] r7006 - in trunk/packages/mgltools/opengltk/trunk/debian: . patches source

2011-06-13 Thread Thorsten Alteholz
/opengltk/trunk/debian/patches/tcllib.patch 2011-06-13 15:05:21 UTC (rev 7006) @@ -0,0 +1,18 @@ +Description: use general stub lib instead of versioned stub +Author: Thorsten Alteholz deb...@alteholz.de +Last-Update: 2011-06-12 +--- opengltk.org/setup.py2011-06-12 08:46:22.0 +0200

[med-svn] r7008 - in trunk/packages/mgltools: mglutil/trunk/debian molkit/trunk/debian utpackages/trunk/debian

2011-06-13 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-06-13 15:06:27 + (Mon, 13 Jun 2011) New Revision: 7008 Added: trunk/packages/mgltools/utpackages/trunk/debian/mgltools-utpackages.lintian-overrides Modified: trunk/packages/mgltools/mglutil/trunk/debian/rules

[med-svn] r7009 - trunk/packages/fis-gtm

2011-06-13 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-06-13 15:12:38 + (Mon, 13 Jun 2011) New Revision: 7009 Added: trunk/packages/fis-gtm/README Log: this might be the way to go Added: trunk/packages/fis-gtm/README === ---

[med-svn] r7010 - trunk/packages/fis-gtm

2011-06-13 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-06-13 17:50:33 + (Mon, 13 Jun 2011) New Revision: 7010 Added: trunk/packages/fis-gtm/fis-gtm/ Log: start with meta package ___ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org

[med-svn] r7011 - in trunk/packages/fis-gtm/fis-gtm: . trunk trunk/debian trunk/debian/source

2011-06-13 Thread Thorsten Alteholz
/changelog (rev 0) +++ trunk/packages/fis-gtm/fis-gtm/trunk/debian/changelog 2011-06-13 17:51:00 UTC (rev 7011) @@ -0,0 +1,5 @@ +fis-gtm (5.4.2.A-1) UNRELEASED; urgency=low + + * Initial release (Closes: #12345) + + -- Thorsten Alteholz deb...@alteholz.de Mon, 13

[med-svn] r7026 - trunk/packages/mgltools/bhtree/trunk/debian

2011-06-15 Thread Thorsten Alteholz
-1) unstable; urgency=low + + * New upstream version. + * debian/control: +- add myself to Uploaders: +- Standards-Version: 3.9.2 (no changes needed) + * debian/copyright: word copyright needed in text + + -- Thorsten Alteholz deb...@alteholz.de Wed, 15 Jun 2011 21:43:36 +0200

[med-svn] r7029 - trunk/packages/mgltools/gle/trunk/debian

2011-06-15 Thread Thorsten Alteholz
+ + * New upstream version. + * debian/control: added myseld to Uploaders: + * debian/README.Debian: spelling corrected + + -- Thorsten Alteholz deb...@alteholz.de Wed, 15 Jun 2011 21:43:38 +0200 + mgltools-gle (1.5.4.cvs.20100912-2) unstable; urgency=low * Debhelper 8 (control+compat

[med-svn] r7030 - trunk/packages/mgltools/molkit/trunk/debian

2011-06-15 Thread Thorsten Alteholz
+ * dep header added to patches + + -- Thorsten Alteholz deb...@alteholz.de Wed, 15 Jun 2011 21:43:38 +0200 + mgltools-molkit (1.5.4.cvs.20100912-2) unstable; urgency=low * Debhelper 8 (control+compat) ___ debian-med-commit mailing list debian-med

[med-svn] r7103 - in trunk/packages/mgltools: . mgltools-external-get-orig-source

2011-06-20 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-06-20 20:08:04 + (Mon, 20 Jun 2011) New Revision: 7103 Added: trunk/packages/mgltools/mgltools-external-get-orig-source/ trunk/packages/mgltools/mgltools-external-get-orig-source/README

[med-svn] r7117 - trunk/packages/mgltools/mgltools-external-get-orig-source

2011-06-21 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-06-21 16:37:58 + (Tue, 21 Jun 2011) New Revision: 7117 Added: trunk/packages/mgltools/mgltools-external-get-orig-source/rc-version Modified: trunk/packages/mgltools/mgltools-external-get-orig-source/get-orig-source Log: get-orig-source for mgltools

[med-svn] r7118 - trunk/packages/mgltools/volume/trunk/debian

2011-06-21 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-06-21 16:38:36 + (Tue, 21 Jun 2011) New Revision: 7118 Modified: trunk/packages/mgltools/volume/trunk/debian/ trunk/packages/mgltools/volume/trunk/debian/rules Log: get-orig-source for mgltools-volume Property changes on:

[med-svn] r7119 - trunk/packages/mgltools/mgltools-external-get-orig-source

2011-06-21 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-06-21 16:39:38 + (Tue, 21 Jun 2011) New Revision: 7119 Modified: trunk/packages/mgltools/mgltools-external-get-orig-source/README Log: svn command for mgltools external Modified: trunk/packages/mgltools/mgltools-external-get-orig-source/README

[med-svn] r7120 - in trunk/packages/mgltools: autodocktools/trunk/debian bhtree/trunk/debian cmolkit/trunk/debian dejavu/trunk/debian geomutils/trunk/debian gle/trunk/debian mglutil/trunk/debian molki

2011-06-21 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-06-21 16:43:52 + (Tue, 21 Jun 2011) New Revision: 7120 Modified: trunk/packages/mgltools/autodocktools/trunk/debian/ trunk/packages/mgltools/bhtree/trunk/debian/ trunk/packages/mgltools/cmolkit/trunk/debian/

[med-svn] r7122 - trunk/packages/mgltools/mgltools-external-get-orig-source

2011-06-22 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-06-22 17:45:00 + (Wed, 22 Jun 2011) New Revision: 7122 Modified: trunk/packages/mgltools/mgltools-external-get-orig-source/get-orig-source Log: build orig.tar for a certain date Modified:

[med-svn] r7123 - in trunk/packages/mgltools: autodocktools/trunk/debian bhtree/trunk/debian cmolkit/trunk/debian dejavu/trunk/debian geomutils/trunk/debian gle/trunk/debian mglutil/trunk/debian molki

2011-06-22 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-06-22 17:47:52 + (Wed, 22 Jun 2011) New Revision: 7123 Modified: trunk/packages/mgltools/autodocktools/trunk/debian/rules trunk/packages/mgltools/bhtree/trunk/debian/rules trunk/packages/mgltools/cmolkit/trunk/debian/rules

[med-svn] r7156 - trunk/packages/mgltools/vision/trunk/debian

2011-06-25 Thread Thorsten Alteholz
-vision (1.5.6~rc1+cvs.20110625-1) unstable; urgency=low + + * using current source from cvs + * debian/control: dependency on mgltools-support added (Closes: #532361) + * debian/control: typo corrected to add dependency on idle + + -- Thorsten Alteholz deb...@alteholz.de Sat, 25 Jun 2011 14:20:32

[med-svn] r7157 - trunk/packages/mgltools/vision/tags

2011-06-25 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-06-25 13:30:20 + (Sat, 25 Jun 2011) New Revision: 7157 Added: trunk/packages/mgltools/vision/tags/1.5.6~rc1+cvs.20110625-1/ Log: tag 1.5.6~rc1+cvs.20110625-1 ___ debian-med-commit mailing list

[med-svn] r7159 - trunk/packages/mgltools/opengltk/trunk/debian

2011-06-25 Thread Thorsten Alteholz
) @@ -1,3 +1,10 @@ +mgltools-opengltk (1.5.6~rc1+cvs.20110625-1) unstable; urgency=low + + * using current source from cvs + * debian/control: depend on versionless tk-dev (Closes: #631539) + + -- Thorsten Alteholz deb...@alteholz.de Sat, 25 Jun 2011 18:20:22 +0200 + mgltools-opengltk (1.5.6~rc1

[med-svn] r7160 - trunk/packages/mgltools/opengltk/tags

2011-06-25 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-06-25 16:46:32 + (Sat, 25 Jun 2011) New Revision: 7160 Added: trunk/packages/mgltools/opengltk/tags/1.5.6~rc1+cvs.20110625-1/ Log: tag 1.5.6~rc1+cvs.20110625-1 ___ debian-med-commit mailing list

[med-svn] r7203 - in trunk/packages/mgltools: . cadd cadd/trunk cadd/trunk/debian webservices webservices/trunk webservices/trunk/debian

2011-06-30 Thread Thorsten Alteholz
...@lists.alioth.debian.org +DM-Upload-Allowed: yes +Uploaders: Steffen Moeller moel...@debian.org, + Sargis Dallakyan sar...@scripps.edu, + Andreas Tille ti...@debian.org, + Thorsten Alteholz deb...@alteholz.de +Build-Depends: debhelper (= 8),python-all (= 2.6) +Standards-Version: 3.9.2 +XS-Python-Version: = 2.5 +Vcs

[med-svn] r7225 - trunk/packages/mgltools/cadd/trunk/debian/patches

2011-07-06 Thread Thorsten Alteholz
2011-07-06 17:34:21 UTC (rev 7225) @@ -0,0 +1,144 @@ +Description: replace ksh by python +Author: Thorsten Alteholz deb...@alteholz.de +Last-Update: 2011-07-06 +Index: mgltools-cadd-1.5.6.org/CADD/workflows/MDanalysis/NAMDNBCR_0.1_net.py

[med-svn] r7238 - in trunk/packages: . vcftools vcftools/trunk vcftools/trunk/debian vcftools/trunk/debian/patches vcftools/trunk/debian/source

2011-07-10 Thread Thorsten Alteholz
/changelog (rev 0) +++ trunk/packages/vcftools/trunk/debian/changelog 2011-07-10 16:06:33 UTC (rev 7238) @@ -0,0 +1,5 @@ +vcftools (0.1.5-1) UNRELEASED; urgency=low + + * Initial release (Closes: #633142 + + -- Thorsten Alteholz deb...@alteholz.de Sun, 10 Jul 2011 15

[med-svn] r7273 - in trunk/packages/fis-gtm: . fis-gtm/trunk/debian fis-gtm-initial-i386/trunk/debian fis-gtm-server fis-gtm-server/trunk fis-gtm-server/trunk/debian fis-gtm-server/trunk/debian/source

2011-07-13 Thread Thorsten Alteholz
:23 UTC (rev 7273) @@ -5,7 +5,7 @@ Standards-Version: 3.9.2 Maintainer: Debian Med Packaging Team debian-med-packag...@lists.alioth.debian.org DM-Upload-Allowed: yes -Uploaders: Andreas Till ti...@debian.org, +Uploaders: Andreas Tille ti...@debian.org, Thorsten Alteholz deb

[med-svn] r7285 - in trunk/packages: . uw-prism uw-prism/trunk uw-prism/trunk/debian uw-prism/trunk/debian/patches uw-prism/trunk/debian/source

2011-07-14 Thread Thorsten Alteholz
(rev 0) +++ trunk/packages/uw-prism/trunk/debian/changelog 2011-07-14 17:38:05 UTC (rev 7285) @@ -0,0 +1,5 @@ +uw-prism (1.5.1-1) unstable; urgency=low + + * Initial release (Closes: #) is the bug number of your ITP + + -- Thorsten Alteholz deb

[med-svn] r7310 - in trunk/packages/fis-gtm: . fis-gtm/trunk/debian fis-gtm/trunk/debian/source fis-gtm-initial-i386/trunk/debian fis-gtm-server/trunk/debian

2011-07-20 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-07-20 17:31:26 + (Wed, 20 Jul 2011) New Revision: 7310 Added: trunk/packages/fis-gtm/TODO trunk/packages/fis-gtm/fis-gtm-server/trunk/debian/defaults.template.template

[med-svn] r7315 - in trunk/packages/fis-gtm: fis-gtm-initial-i386/trunk/debian fis-gtm-server/trunk/debian

2011-07-21 Thread Thorsten Alteholz
) + * Initial release, helps to close #541239 -- Thorsten Alteholz deb...@alteholz.de Thu, 09 Jun 2011 21:34:17 +0200 Modified: trunk/packages/fis-gtm/fis-gtm-initial-i386/trunk/debian/control === --- trunk/packages/fis-gtm/fis-gtm

[med-svn] r7316 - in trunk/packages/fis-gtm/fis-gtm-initial-i386/trunk/debian: . po

2011-07-22 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-07-22 17:57:09 + (Fri, 22 Jul 2011) New Revision: 7316 Added: trunk/packages/fis-gtm/fis-gtm-initial-i386/trunk/debian/fis-gtm-initial.config trunk/packages/fis-gtm/fis-gtm-initial-i386/trunk/debian/fis-gtm-initial.templates

[med-svn] r7393 - trunk/packages/mgltools/pmv/trunk/debian

2011-08-08 Thread Thorsten Alteholz
:50 UTC (rev 7393) @@ -1,3 +1,11 @@ +mgltools-pmv (1.5.6~rc1+cvs.20110808-1) unstable; urgency=low + + * New upstream version. + * separate test functions from main package into mgltools-pmv-test to +reduce size of mgltools-pmv + + -- Thorsten Alteholz deb...@alteholz.de Mon, 08 Aug 2011 18

[med-svn] r7677 - trunk/packages/netepi-collection/trunk/debian

2011-09-05 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-09-05 17:42:39 + (Mon, 05 Sep 2011) New Revision: 7677 Modified: trunk/packages/netepi-collection/trunk/debian/control Log: typo corrected Modified: trunk/packages/netepi-collection/trunk/debian/control

[med-svn] r7678 - trunk/packages/dcm4che/core/trunk/debian

2011-09-05 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-09-05 17:44:10 + (Mon, 05 Sep 2011) New Revision: 7678 Modified: trunk/packages/dcm4che/core/trunk/debian/control Log: typo corrected Modified: trunk/packages/dcm4che/core/trunk/debian/control

[med-svn] r7803 - in trunk/packages/abyss: . trunk/debian

2011-09-14 Thread Thorsten Alteholz
(rev 7802) +++ trunk/packages/abyss/trunk/debian/changelog 2011-09-14 20:05:17 UTC (rev 7803) @@ -1,3 +1,9 @@ +abyss (1.3.0-1) ABANDONED; urgency=low + + * see README.status + + -- Thorsten Alteholz deb...@alteholz.de Wed, 14 Sep 2011 18:00:00 +0200 + abyss (1.2.5-1) unstable; urgency=low

[med-svn] r7804 - trunk/packages/abyss/trunk/debian

2011-09-14 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-09-14 20:09:06 + (Wed, 14 Sep 2011) New Revision: 7804 Modified: trunk/packages/abyss/trunk/debian/ Log: set property Property changes on: trunk/packages/abyss/trunk/debian ___ Added:

[med-svn] r7831 - in trunk/packages: R/r-bioc-hilbertvis/trunk/debian R/r-cran-diagnosismed/trunk/debian R/r-cran-epi/trunk/debian R/r-cran-epicalc/trunk/debian R/r-cran-epir/trunk/debian R/r-cran-med

2011-09-16 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-09-16 17:39:25 + (Fri, 16 Sep 2011) New Revision: 7831 Modified: trunk/packages/R/r-bioc-hilbertvis/trunk/debian/ trunk/packages/R/r-cran-diagnosismed/trunk/debian/ trunk/packages/R/r-cran-epi/trunk/debian/

[med-svn] r7832 - trunk/packages/abyss

2011-09-16 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-09-16 17:57:53 + (Fri, 16 Sep 2011) New Revision: 7832 Removed: trunk/packages/abyss/trunk/ Log: abyss is no longer maintained within Debian Med - README.status ___ debian-med-commit mailing list

[med-svn] r7834 - trunk/packages/ball

2011-09-16 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-09-16 18:02:32 + (Fri, 16 Sep 2011) New Revision: 7834 Removed: trunk/packages/ball/tags/ trunk/packages/ball/trunk/ Log: ball is now maintained with git - README.status ___ debian-med-commit mailing list

[med-svn] r7835 - trunk/packages/ball

2011-09-16 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-09-16 18:03:16 + (Fri, 16 Sep 2011) New Revision: 7835 Added: trunk/packages/ball/README.status Removed: trunk/packages/ball/now_managed_via_git Log: README.status for ball Added: trunk/packages/ball/README.status

[med-svn] r7836 - trunk/packages/emboss

2011-09-16 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-09-16 21:30:57 + (Fri, 16 Sep 2011) New Revision: 7836 Added: trunk/packages/emboss/README.status Removed: trunk/packages/emboss/MOVED Log: info moved to README.status Deleted: trunk/packages/emboss/MOVED

[med-svn] r7837 - trunk/packages/praat

2011-09-16 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-09-16 21:32:31 + (Fri, 16 Sep 2011) New Revision: 7837 Removed: trunk/packages/praat/tags/ Log: praat is maintained with git - README.status ___ debian-med-commit mailing list

[med-svn] r7838 - trunk/packages/praat

2011-09-16 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-09-16 21:33:19 + (Fri, 16 Sep 2011) New Revision: 7838 Added: trunk/packages/praat/README.status Removed: trunk/packages/praat/README_git Log: README.status for praat Added: trunk/packages/praat/README.status

[med-svn] r7981 - in trunk/packages: abyss abyss/trunk ball ball/trunk clustalx clustalx/trunk emboss emboss/trunk praat praat/trunk treetool

2011-09-28 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-09-28 17:54:32 + (Wed, 28 Sep 2011) New Revision: 7981 Added: trunk/packages/abyss/trunk/ trunk/packages/abyss/trunk/README.status trunk/packages/ball/trunk/ trunk/packages/ball/trunk/README.status trunk/packages/clustalx/trunk/

[med-svn] r7985 - trunk/packages/treetool

2011-09-29 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-09-29 17:44:55 + (Thu, 29 Sep 2011) New Revision: 7985 Removed: trunk/packages/treetool/tags/ trunk/packages/treetool/trunk/ Modified: trunk/packages/treetool/README.status Log: treetool is only available in oldstable now Modified:

[med-svn] r7986 - in trunk/packages/treetool: . trunk

2011-09-29 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-09-29 17:46:43 + (Thu, 29 Sep 2011) New Revision: 7986 Added: trunk/packages/treetool/trunk/ trunk/packages/treetool/trunk/README.status Removed: trunk/packages/treetool/README.status Log: final version of treetools README.status Deleted:

[med-svn] r8014 - trunk/packages/perlprimer

2011-09-30 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-09-30 17:22:26 + (Fri, 30 Sep 2011) New Revision: 8014 Removed: trunk/packages/perlprimer/branches/ trunk/packages/perlprimer/tags/ trunk/packages/perlprimer/trunk/ Log: perlprimer moved to git ___

[med-svn] r8015 - in trunk/packages/perlprimer: . trunk

2011-09-30 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-09-30 17:24:32 + (Fri, 30 Sep 2011) New Revision: 8015 Added: trunk/packages/perlprimer/trunk/ trunk/packages/perlprimer/trunk/README.status Log: README.status for perlprimer Added: trunk/packages/perlprimer/trunk/README.status

[med-svn] r8016 - trunk/packages/libbio-graphics-perl

2011-09-30 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-09-30 17:25:23 + (Fri, 30 Sep 2011) New Revision: 8016 Removed: trunk/packages/libbio-graphics-perl/tags/ trunk/packages/libbio-graphics-perl/trunk/ Log: libbio-graphics-perl moved to git ___

[med-svn] r8017 - in trunk/packages/libbio-graphics-perl: . trunk

2011-09-30 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-09-30 17:25:58 + (Fri, 30 Sep 2011) New Revision: 8017 Added: trunk/packages/libbio-graphics-perl/trunk/ trunk/packages/libbio-graphics-perl/trunk/README.status Log: README.status for libbio-graphics-perl Added:

[med-svn] r8018 - trunk/packages/phylowin

2011-09-30 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-09-30 17:26:39 + (Fri, 30 Sep 2011) New Revision: 8018 Removed: trunk/packages/phylowin/tags/ trunk/packages/phylowin/trunk/ Log: pyhlowin abandoned (replaced by seaview) ___ debian-med-commit mailing list

[med-svn] r8019 - in trunk/packages/phylowin: . trunk

2011-09-30 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-09-30 17:27:17 + (Fri, 30 Sep 2011) New Revision: 8019 Added: trunk/packages/phylowin/trunk/ trunk/packages/phylowin/trunk/README.status Log: README.status for phylowin Added: trunk/packages/phylowin/trunk/README.status

[med-svn] r8020 - trunk/packages/dialign-t-doc

2011-09-30 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-09-30 17:28:01 + (Fri, 30 Sep 2011) New Revision: 8020 Removed: trunk/packages/dialign-t-doc/trunk/ Log: dialign-t-doc removed from Debian ___ debian-med-commit mailing list

[med-svn] r8021 - in trunk/packages/dialign-t-doc: . trunk

2011-09-30 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-09-30 17:28:36 + (Fri, 30 Sep 2011) New Revision: 8021 Added: trunk/packages/dialign-t-doc/trunk/ trunk/packages/dialign-t-doc/trunk/README.status Log: README.status for dialign-t-doc Added: trunk/packages/dialign-t-doc/trunk/README.status

[med-svn] r8022 - trunk/packages/samtools

2011-09-30 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-09-30 17:29:12 + (Fri, 30 Sep 2011) New Revision: 8022 Removed: trunk/packages/samtools/tags/ trunk/packages/samtools/trunk/ Log: samtools moved to git ___ debian-med-commit mailing list

[med-svn] r8023 - in trunk/packages/samtools: . trunk

2011-09-30 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-09-30 17:29:41 + (Fri, 30 Sep 2011) New Revision: 8023 Added: trunk/packages/samtools/trunk/ trunk/packages/samtools/trunk/README.status Log: README.status for samtools Added: trunk/packages/samtools/trunk/README.status

[med-svn] r8024 - trunk/packages/bwa

2011-09-30 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-09-30 17:30:13 + (Fri, 30 Sep 2011) New Revision: 8024 Removed: trunk/packages/bwa/branch/ trunk/packages/bwa/tags/ trunk/packages/bwa/trunk/ Log: bwa moved to git ___ debian-med-commit mailing list

[med-svn] r8025 - trunk/packages/bwa

2011-09-30 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-09-30 17:30:43 + (Fri, 30 Sep 2011) New Revision: 8025 Added: trunk/packages/bwa/README.status Log: README.status for bwa Added: trunk/packages/bwa/README.status === ---

[med-svn] r8026 - trunk/packages/clustalw

2011-09-30 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-09-30 17:31:12 + (Fri, 30 Sep 2011) New Revision: 8026 Removed: trunk/packages/clustalw/tags/ trunk/packages/clustalw/trunk/ Log: clustalw moved to git ___ debian-med-commit mailing list

[med-svn] r8027 - in trunk/packages/clustalw: . trunk

2011-09-30 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-09-30 17:31:47 + (Fri, 30 Sep 2011) New Revision: 8027 Added: trunk/packages/clustalw/trunk/ trunk/packages/clustalw/trunk/README.status Log: README.status for clustalw Added: trunk/packages/clustalw/trunk/README.status

[med-svn] r8125 - trunk/packages/ginkgocadx/trunk/debian

2011-10-11 Thread Thorsten Alteholz
* Add myself to uploaders - -- Mathieu Malaterre mathieu.malate...@gmail.com Thu, 06 Oct 2011 15:28:35 +0200 + [ Thorsten Alteholz ] + * debian/copyright: + - change Format: (according to lintian) + - filenames in Files: need to be separated by whitspace instead of comma + * debian

[med-svn] r8185 - in trunk/packages: dicoogle/trunk/debian insighttoolkit/wrapitk/python/trunk/debian micromanager/trunk/debian

2011-10-18 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-10-18 17:53:28 + (Tue, 18 Oct 2011) New Revision: 8185 Modified: trunk/packages/dicoogle/trunk/debian/ trunk/packages/insighttoolkit/wrapitk/python/trunk/debian/ trunk/packages/micromanager/trunk/debian/ Log: properties update Property changes on:

[med-svn] r8186 - in trunk/packages/cluster3/trunk: . debian

2011-10-18 Thread Thorsten Alteholz
; urgency=low +cluster3 (1.50-1) UNRELEASED; urgency=low + * XXX TODO: before uploading the ITP needs to be reopened + + [ Thorsten Alteholz ] + * New upstream release (1.50). + [ Steffen Moeller ] - * New upstream release. + * New upstream release (1.40). * Improved on debian/rules

[med-svn] r8187 - in trunk/packages/dazzle/trunk: . debian

2011-10-18 Thread Thorsten Alteholz
) UNRELEASED; urgency=low + [ Thorsten Alteholz ] + * debian/rules: target get-orig-source added + + [ David Paleino ] * debian/watch fixed. - -- David Paleino d.pale...@gmail.com Wed, 16 Apr 2008 22:38:37 +0200 + -- DMPT debian-med-packag...@lists.alioth.debian.org Wed, 16 Apr 2008 22

[med-svn] r8188 - trunk/packages/acedb/trunk/debian

2011-10-18 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-10-18 17:57:37 + (Tue, 18 Oct 2011) New Revision: 8188 Modified: trunk/packages/acedb/trunk/debian/rules Log: QA, project green: move all files out of sight of svn-buildpackage Modified: trunk/packages/acedb/trunk/debian/rules

[med-svn] r8218 - in trunk/packages/vcftools/trunk/debian: . patches

2011-10-19 Thread Thorsten Alteholz
(rev 8217) +++ trunk/packages/vcftools/trunk/debian/changelog 2011-10-19 17:32:07 UTC (rev 8218) @@ -1,3 +1,9 @@ +vcftools (0.1.7-1) unstable; urgency=low + + * new upstream version + + -- Thorsten Alteholz deb...@alteholz.de Wed, 19 Oct 2011 18:00:00 +0200 + vcftools (0.1.6-1) unstable

[med-svn] r8219 - trunk/packages/vcftools/trunk/debian

2011-10-19 Thread Thorsten Alteholz
) unstable; urgency=low * new upstream version + * rearrange debian/copyright to calm lintian -- Thorsten Alteholz deb...@alteholz.de Wed, 19 Oct 2011 18:00:00 +0200 Modified: trunk/packages/vcftools/trunk/debian/copyright

[med-svn] r8220 - in trunk/packages/meme/trunk: . debian

2011-10-19 Thread Thorsten Alteholz
+meme (4.7.0-1) UNRELEASED; urgency=low + [ Thorsten Alteholz ] + * new upstream release + + [ Andreas Tille ] * Initial Release. - -- Andreas Tille ti...@debian.org Thu, 27 Jan 2011 17:42:05 +0100 + -- DMPT debian-med-packag...@lists.alioth.debian.org Thu, 27 Jan 2011 17:42:05 +0100

[med-svn] r8221 - in trunk/packages/treeview/trunk: . debian

2011-10-19 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-10-19 20:04:16 + (Wed, 19 Oct 2011) New Revision: 8221 Added: trunk/packages/treeview/trunk/README.status Removed: trunk/packages/treeview/trunk/README Modified: trunk/packages/treeview/trunk/debian/changelog Log: README.status added Deleted:

[med-svn] r8222 - in trunk/packages/martj/trunk: . debian

2011-10-19 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-10-19 20:04:37 + (Wed, 19 Oct 2011) New Revision: 8222 Added: trunk/packages/martj/trunk/README.status Removed: trunk/packages/martj/trunk/README Modified: trunk/packages/martj/trunk/debian/changelog Log: README.status added Deleted:

[med-svn] r8223 - in trunk/packages/libbio-das-perl/trunk: . debian

2011-10-19 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-10-19 20:04:55 + (Wed, 19 Oct 2011) New Revision: 8223 Added: trunk/packages/libbio-das-perl/trunk/README.status Removed: trunk/packages/libbio-das-perl/trunk/README Modified: trunk/packages/libbio-das-perl/trunk/debian/changelog Log: README.status

[med-svn] r8224 - in trunk/packages/ecell/trunk: . debian

2011-10-19 Thread Thorsten Alteholz
) @@ -1,3 +1,15 @@ +ecell (3.2.2-1) UNRELEASED; urgency=low + + * TODO: check dependencies: + - is it correct to replace python2.2-xmlbase by python? + - is it correct to replace python2.2-numeric by python-numpy? + + [ Thorsten Alteholz ] + * new upstream version + * debian/control

[med-svn] r8320 - trunk/packages/care2x/trunk/debian

2011-10-27 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-10-27 16:56:40 + (Thu, 27 Oct 2011) New Revision: 8320 Modified: trunk/packages/care2x/trunk/debian/control Log: add correct Maintainer: line Modified: trunk/packages/care2x/trunk/debian/control

[med-svn] r8321 - trunk/packages/R/r-cran-psy/trunk/debian

2011-10-27 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-10-27 16:57:39 + (Thu, 27 Oct 2011) New Revision: 8321 Modified: trunk/packages/R/r-cran-psy/trunk/debian/control Log: is deprecated, according to changelog it should be = Modified: trunk/packages/R/r-cran-psy/trunk/debian/control

[med-svn] r8322 - trunk/packages/R/r-cran-g.data/trunk/debian

2011-10-27 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-10-27 16:58:00 + (Thu, 27 Oct 2011) New Revision: 8322 Modified: trunk/packages/R/r-cran-g.data/trunk/debian/control Log: is deprecated, according to changelog it should be = Modified: trunk/packages/R/r-cran-g.data/trunk/debian/control

[med-svn] r8323 - trunk/packages/vista/trunk/debian

2011-10-27 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-10-27 16:59:17 + (Thu, 27 Oct 2011) New Revision: 8323 Modified: trunk/packages/vista/trunk/debian/control Log: dependency on quilt not needed and missing comma reappeared Modified: trunk/packages/vista/trunk/debian/control

[med-svn] r8355 - trunk/packages/charls/trunk/debian

2011-10-29 Thread Thorsten Alteholz
+ + [ Thorsten Alteholz ] + * debian/rules: download URL for get-orig-source changed + + -- Mathieu Malaterre mathieu.malate...@gmail.com Fri, 28 Oct 2011 18:00:00 +0200 + charls (1.0-1) unstable; urgency=low * Initial release (Closes: #624346) Modified: trunk/packages/charls/trunk/debian/rules

[med-svn] r8372 - in trunk/packages/mothur/trunk/debian: . patches

2011-11-01 Thread Thorsten Alteholz
/changelog2011-11-01 19:05:27 UTC (rev 8372) @@ -1,3 +1,15 @@ +mothur (1.22.1-1) UNRELEASED; urgency=low + + * TODO: lintian talks about some spelling errors that might be patched away + + [ Thorsten Alteholz ] + * new upstream version + * adapted patches to this version + * debian/control

[med-svn] r8373 - trunk/packages/bioruby/trunk/debian

2011-11-01 Thread Thorsten Alteholz
2011-11-01 19:05:54 UTC (rev 8373) @@ -1,3 +1,13 @@ +bioruby (1.4.2-1) UNRELEASED; urgency=low + + [ Thorsten Alteholz ] + * New upstream version + * debian/control: +- Standards-Version: 3.9.2 (no changes needed) +- Debhelper = 8 + + -- DMPT debian-med-packag...@lists.alioth.debian.org

[med-svn] r8374 - in trunk/packages: activiz.net/trunk/debian insighttoolkit/wrapitk/python/trunk/debian

2011-11-01 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-11-01 19:06:35 + (Tue, 01 Nov 2011) New Revision: 8374 Modified: trunk/packages/activiz.net/trunk/debian/ trunk/packages/insighttoolkit/wrapitk/python/trunk/debian/ Log: some property changes Property changes on:

[med-svn] r8392 - trunk/packages/biomode/trunk

2011-11-02 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-11-02 18:46:42 + (Wed, 02 Nov 2011) New Revision: 8392 Added: trunk/packages/biomode/trunk/README.status Log: package with source in repository Added: trunk/packages/biomode/trunk/README.status

[med-svn] r8393 - trunk/packages/fastdnaml/trunk

2011-11-02 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-11-02 19:00:39 + (Wed, 02 Nov 2011) New Revision: 8393 Added: trunk/packages/fastdnaml/trunk/README.status Log: dead upstream Added: trunk/packages/fastdnaml/trunk/README.status === ---

[med-svn] r8398 - trunk/packages/biomode/trunk/debian

2011-11-02 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-11-02 21:13:00 + (Wed, 02 Nov 2011) New Revision: 8398 Modified: trunk/packages/biomode/trunk/debian/ Log: property changes Property changes on: trunk/packages/biomode/trunk/debian ___

[med-svn] r8399 - trunk/packages/med-doc/trunk

2011-11-02 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-11-02 21:14:05 + (Wed, 02 Nov 2011) New Revision: 8399 Added: trunk/packages/med-doc/trunk/README.status Log: source also in repository Added: trunk/packages/med-doc/trunk/README.status ===

[med-svn] r8637 - trunk/packages/activiz.net/trunk/debian

2011-11-21 Thread Thorsten Alteholz
+1,11 @@ +activiz.net (5.6.1-4) UNRELEASED; urgency=low + + [ Thorsten Alteholz ] + * debian/get-orig-source: put orig.tar.gz in ../tarballs to allow +automatic build with svn-buildpackage + + -- Mathieu Malaterre mathieu.malate...@gmail.com Mon, 21 Nov 2011 18:00:00 +0100 + activiz.net

[med-svn] r8638 - trunk/packages/bio-formats/trunk/debian

2011-11-21 Thread Thorsten Alteholz
+1,9 @@ -bio-formats (4.3.1-1) unstable; urgency=low +bio-formats (4.3.1-1) UNRELEASED; urgency=low * Initial Debian Upload (Closes: #??) + [ Thorsten Alteholz ] + * debian/get-orig-source: put orig.tar.gz in ../tarballs to allow +automatic build with svn-buildpackage + -- Mathieu

[med-svn] r8639 - trunk/packages/cellprofiler/trunk/debian

2011-11-21 Thread Thorsten Alteholz
+1,9 @@ -cellprofiler (2.0~svn10997-1) unstable; urgency=low +cellprofiler (2.0~svn10997-1) UNRELEASED; urgency=low * Initial Debian Upload (Closes: #647995) + [ Thorsten Alteholz ] + * debian/get-orig-source: put orig.tar.gz in ../tarballs to allow +automatic build with svn

[med-svn] r8640 - in trunk/packages: cellprofiler/trunk/debian ctk/trunk/debian libstrap-java/trunk/debian med-doc/trunk/debian pylibtiff/trunk/debian strap/trunk/debian strap-base/trunk/debian tifffi

2011-11-21 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-11-21 21:15:09 + (Mon, 21 Nov 2011) New Revision: 8640 Modified: trunk/packages/cellprofiler/trunk/debian/ trunk/packages/ctk/trunk/debian/ trunk/packages/libstrap-java/trunk/debian/ trunk/packages/med-doc/trunk/debian/

[med-svn] r8641 - trunk/packages/molphy

2011-11-21 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-11-21 21:20:56 + (Mon, 21 Nov 2011) New Revision: 8641 Removed: trunk/packages/molphy/tags/ trunk/packages/molphy/trunk/ Log: removed from debian ___ debian-med-commit mailing list

[med-svn] r8642 - in trunk/packages/molphy: . trunk

2011-11-21 Thread Thorsten Alteholz
Author: alteholz-guest Date: 2011-11-21 21:22:40 + (Mon, 21 Nov 2011) New Revision: 8642 Added: trunk/packages/molphy/trunk/ trunk/packages/molphy/trunk/README.status Log: here it goes Added: trunk/packages/molphy/trunk/README.status

[med-svn] r8753 - trunk/packages/smile/trunk/debian

2011-12-03 Thread Thorsten Alteholz
pages (Closes: #650475, thanks to A. Costa). + + -- Thorsten Alteholz deb...@alteholz.de Sat, 03 Dec 2011 19:20:00 +0100 + mlv-smile (1.47-1) unstable; urgency=low * initial Release (Closes: #221492). Modified: trunk/packages/smile/trunk/debian/rules

[med-svn] r8770 - trunk/packages/dotur/trunk/debian

2011-12-05 Thread Thorsten Alteholz
(1.53-2) UNRELEASED; urgency=low +dotur (1.53-2) unstable; urgency=low [ A. Costa ] * Corrected typo in dotur.1 manual page (Closes: #650470). - -- Charles Plessy ple...@debian.org Wed, 30 Nov 2011 23:16:38 +0900 + [ Thorsten Alteholz ] + * debian/rules: target get-orig-source added

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