Re: scikit-learn testing migration

2022-08-16 Thread Christian Kastner
On 2022-07-28 09:15, Graham Inggs wrote: > On Wed, 27 Jul 2022 at 17:57, M. Zhou wrote: >> The previous segfault on armel becomes Bus Error on armel and armhf. >> I can build it on Power9, but it seems that the test fails on power8 (our >> buildd). > > In #1003165, one of the arm porters wrote

Re: scikit-learn bug 1008369

2022-04-02 Thread Christian Kastner
Hi Chiara, On 2022-04-01 05:47, Chiara Marmo wrote: > I have investigated the scikit-learn bug #1008369 [1]. > I thought it could be fixed by an update of numpydoc [2], but I was > wrong (sorry Christian... I believe you are in this list too so I'm not > cross-posting on debian-python). Thanks

Re: Datasets downloaded by scikit-learn as separate packages?

2021-09-21 Thread Christian Kastner
On 21.09.21 16:06, M. Zhou wrote: > I refrained from uploading any datasets except for > > $ apt list dataset\* > Listing... Done > dataset-fashion-mnist/unstable,unstable,now > > as it can be used as a universal sanity test dataset for any machine > learning tool sanity test dataset. (in

Re: Datasets downloaded by scikit-learn as separate packages?

2021-09-20 Thread Christian Kastner
Hi Steffen, I did a few of the last uploads of scikit-learn, so maybe there is something that I can share that might help. On 19.09.21 19:36, Steffen Möller wrote: > Hello, > > This goes out to the good fellas who care about scikit-learn. There is > tutorial for the qiime package that has

Re: Quick Poll: Debian to better support hardware acceleration?

2021-05-21 Thread Christian Kastner
On 21.05.21 21:13, François Mazen wrote: > CUDA libraries are de-facto outdated when new Debian release comes > out due to new hardware release and vendor lock-in business model. As > a consequence, the user will always download the last libraries > version from the vendor web-site. That's not

Re: Quick Poll: Debian to better support hardware acceleration?

2021-05-21 Thread Christian Kastner
On 21.05.21 06:40, M. Zhou wrote: > Choice 1: this game belongs to the big companies. we should offload > such burden to third-party providers such as Anaconda. > Choice 2: we may try to provide what the users need. > Choice 3: Choice 2, by a mile. CUDA wins either way. It's the de facto

Bug#970708: ITP: sktime -- Python machine learning toolbox for time series

2020-09-22 Thread Christian Kastner
Package: wnpp Severity: wishlist Owner: Christian Kastner * Package name: sktime Version : 0.4.1 Upstream Author : sktime developers * URL : https://github.com/alan-turing-institute/sktime * License : BSD-3-clause Programming Lang: Python Description

Re: New Mail list debian-ai available

2020-09-14 Thread Christian Kastner
On 2020-09-14 19:21, Thomas Schiex wrote: > The list should probably better be either called debian-dl (and focused > on Deep Learning stuff) or debian-ai (and be widened in its scope). > Names matter I think. It actually already is the latter; the topics mentioned by Mo were just two particular

Re: New Mail list debian-ai available

2020-09-14 Thread Christian Kastner
On 2020-09-14 05:02, Mo Zhou wrote: > Just to inform you that I've applied for a new mailing list named > debian-ai, focusing on AI and some related acceleration libraries: > > https://lists.debian.org/debian-ai/ That's great to hear! I already subscribed. List admins, thank you for making

Re: lasagne and keras

2020-06-25 Thread Christian Kastner
On 2020-06-24 19:13, Stephen Sinclair wrote: > I have submitted an issue upstream but there has been no response, and > the last real non-trivial commit was in 2018. I believe this is > because it depends on Theano, which we know well is already > end-of-life, so it's possible the authors have

Bug#960805: ITP: python-threadpoolctl -- Python helpers for common threading libraries (BLAS, OpenMP)

2020-05-16 Thread Christian Kastner
Package: wnpp Severity: wishlist Owner: Christian Kastner * Package name: python-threadpoolctl Version : 2.0.0 Upstream Author : Olivier Grisel * URL : https://github.com/joblib/threadpoolctl * License : BSD-3-Clause Programming Lang: Python Description

Bug#958123: ITP: pyswarms -- research toolkit for particle swarm optimization in Python

2020-04-18 Thread Christian Kastner
Package: wnpp Severity: wishlist Owner: Christian Kastner * Package name: pyswarms Version : 1.1.0 Upstream Author : pyswarms developers * URL : https://github.com/ljvmiranda921/pyswarms * License : MIT Programming Lang: Python Description : research

Re: [RFS] python-pweave

2020-02-27 Thread Christian Kastner
On 27.02.20 10:35, Nilesh Patra wrote: > Done. Can you please review+upload if everything looks OK? Uploaded, you can go ahead and tag it.

Re: [RFS] python-pweave

2020-02-27 Thread Christian Kastner
On 27.02.20 06:17, Nilesh Patra wrote: > I fixed python-pweave's currently failing autopkgtests. > Build+autopkgtests pass, and also made it lintian clean. > I have pushed my changes to the team repo here[1]. > Needs review and sponsorship. Looks good! Please add/change the following minor

Re: [RFS] seaborn

2020-02-27 Thread Christian Kastner
On 27.02.20 06:22, Nilesh Patra wrote: > Forgot to `gbp tag`, now fixed and pushed. Yes, that's what I meant. Please consider using the --sign-tags option in future. (Just pointing it out as good practice -- it's not strictly necessary under the Debian Science Policy Manual, and not everyone

Re: [RFS] seaborn

2020-02-26 Thread Christian Kastner
On 27.02.20 00:10, Nilesh Patra wrote: > Aha, alrighty. I have noted this, and will incorporate in future - if it > doesn't need fixing right now, could you please review if everything > looks okay, and sponsor an upload if possible? > That would be great. Uploaded, you can go ahead and tag it.

Re: [RFS] seaborn

2020-02-26 Thread Christian Kastner
Hi Nilesh, On 26.02.20 11:14, Nilesh Patra wrote: > Hi, > currently seaborn FTBFS as indicated on the tracker as well. > I have fixed it; build and autopkgtests pass. > I have pushed my changes to the team repo here[1]. > Needs review and sponsorship. > > [1]:

Bug#949692: ITP: tpot -- Automated Machine Learning built on top of scikit-learn

2020-01-23 Thread Christian Kastner
Package: wnpp Severity: wishlist Owner: Christian Kastner * Package name: TPOT Version : 0.11.1 Upstream Author : Epistasis Lab, Inst.for Biomedical Informatics, UPenn * URL : https://epistasislab.github.io/ * License : GPL-3+ Programming Lang: Python

Bug#949628: ITP: python-configspace -- module to manage configuration spaces

2020-01-22 Thread Christian Kastner
Package: wnpp Severity: wishlist Owner: Christian Kastner * Package name: python-configspace Version : 0.4.12 Upstream Author : ConfigSpace developers * URL : https://github.com/automl/ConfigSpace * License : BSD-3-Clause Programming Lang: Python

Re: Bug#949594: ITP: liac-arff -- library for reading and writing ARFF files in Python

2020-01-22 Thread Christian Kastner
On 22.01.20 16:12, Christian Kastner wrote: > * Package name: liac-arff ... > I intend to maintain this within the Debian Science Team. I created a repository on Salsa but when attempting to initialize it, I get the following error message: A default branch (e.g. master) does not yet

Bug#949594: ITP: liac-arff -- library for reading and writing ARFF files in Python

2020-01-22 Thread Christian Kastner
Package: wnpp Severity: wishlist Owner: Christian Kastner * Package name: liac-arff Version : 2.4.0 Upstream Author : Renato de Pontes Pereira * URL : https://github.com/renatopp/liac-arff * License : MIT/Expat Programming Lang: Python Description

Re: Bug#936924: Moving libsvm to Debian Science team

2020-01-12 Thread Christian Kastner
On 12.01.20 11:46, Andreas Tille wrote: > It would be great if you could look into sklearn! I just saw that Sandro beat me to it :-) 0.22.1+dfsg-1 was uploaded today. I'll add whatever of my changes might still be beneficial for the next version.

Re: Bug#936924: Moving libsvm to Debian Science team

2020-01-12 Thread Christian Kastner
On 11.01.20 06:09, Andreas Tille wrote: > On Fri, Jan 10, 2020 at 11:45:15PM +0100, Christian Kastner wrote:> Strange. > I did not intentionally set the branch protection. Hope it > works now. Pushing worked after this, thanks. I test-rebuilt all packages with build dependenci

Re: Bug#936924: Moving libsvm to Debian Science team

2020-01-10 Thread Christian Kastner
Hi all, On 10.01.20 15:33, Chen-Tse Tsai wrote: > Yes, my changes are merged. I checked the package and everything looks pretty good. I just added some minor polishing of my own. Very surprisingly, not a single symbol has changed since 3.21 -- no additions, no removals, no changes. It looks as

Re: Bug#936924: Moving libsvm to Debian Science team

2020-01-10 Thread Christian Kastner
On 10.01.20 11:07, Andreas Tille wrote: > since my upload was a bit questionable this gives us the chance > to discuss it again. What option would you prefer: > >1. I just re-upload what is in Git right now to new queue >2. Somebody who feels more competent takes over >3. Something

Re: Bug#936924: Moving libsvm to Debian Science team

2019-12-25 Thread Christian Kastner
On 2019-12-25 18:08, Chen-Tse Tsai wrote: > Thanks Andreas and Christian for the updates/comments. I agree that I > should have been more verbose in the changelog. I'm tracing all the > commits to learn more about packaging. I was playing with gbp for > updating upstream. I really like how it

Re: Bug#936924: Moving libsvm to Debian Science team

2019-12-25 Thread Christian Kastner
On 2019-12-25 10:59, Andreas Tille wrote: > Kind regards > >Andreas. I've re-read my original message and feel that I was overly harsh. I was irritated about the rushed upgrade as in private communication with Chen-Tse, I highlighted precisely the possible complexity of this upgrade and

Re: Bug#936924: Moving libsvm to Debian Science team

2019-12-25 Thread Christian Kastner
Andreas, what are you doing? On 2019-12-25 07:52, Andreas Tille wrote: > On Tue, Dec 24, 2019 at 10:39:55AM -0500, Chen-Tse Tsai wrote: >> I just submitted a PR for dropping python2 dependencies: >> https://salsa.debian.org/science-team/libsvm/merge_requests/1 >> >> Any comment is appreciated.

Re: Bug#936924: Moving libsvm to Debian Science team

2019-12-21 Thread Christian Kastner
Hi all, Regarding liblinear: I thought I already set the Maintainer to Debian Science Team, I guess I missed it. On 2019-12-21 20:11, Chen-Tse Tsai wrote: > I've created an account on Salsa. > > Do you think we should remove cdbs and use another build system > instead? Please let me know if

Bug#944261: ITB: python-seaborn -- Python data visualization library

2019-11-06 Thread Christian Kastner
Package: wnpp Severity: wishlist Owner: Christian Kastner X-Debbugs-CC: debian-de...@lists.debian.org, debian-pyt...@lists.debian.org, debian-science@lists.debian.org * Package name: python-seaborn Version : 0.9.0 Upstream Author : Michael Waskom * URL : https

Debian Science Policy and DEP-14 branch names

2019-10-25 Thread Christian Kastner
Hi, I've become accustomed to the DEP-14 branch names, ie * debian/master instead of master * debian/ * upstream/latest instead of upstream * etc. However, the Debian Science Policy Manual currently still maintains master and upstream as a "should" [1]. Has a policy switch to DEP-14

Re: Looking for sponsorship: libfann, pyevolve (updates)

2014-03-13 Thread Christian Kastner
Hi, On 2014-03-04 15:31, Christian Kastner wrote: I've secured sponsorship for some packages already, but would still require sponsorship for the two packages libfann and pyevolve. Both packages had the DM-Upload-Allowed field set. That field has been obsoleted by the new dak approach

Re: Looking for sponsorship: libfann, pyevolve (updates)

2014-03-06 Thread Christian Kastner
On 2014-03-06 10:48, Andreas Tille wrote: On Thu, Mar 06, 2014 at 07:46:45AM +0100, Christian Kastner wrote: On 2014-03-05 16:06, Andreas Tille wrote: So what exactly is your reason not to use git://git.debian.org/git/debian-science/packages/packagename.git as it is described

Re: Looking for sponsorship: libfann, pyevolve (updates)

2014-03-05 Thread Christian Kastner
On 2014-03-05 16:06, Andreas Tille wrote: In case nobody might step in you might be interested in Sponsering of Blends: https://wiki.debian.org/DebianPureBlends/SoB Interesting, thanks. Both packages are part of the machine learning task, actually. The git repos are still hosted by me

Looking for sponsorship: libfann, pyevolve (updates)

2014-03-04 Thread Christian Kastner
Hi, After a long absence, I'd like to resume my involvement in Debian. For that purpose, I'm currently updating all my packages. I've secured sponsorship for some packages already, but would still require sponsorship for the two packages libfann and pyevolve. Both packages had the

Re: Looking for sponsorship: libfann, pyevolve (updates)

2014-03-04 Thread Christian Kastner
On 2014-03-04 16:31, Andreas Tille wrote: On Tue, Mar 04, 2014 at 03:31:47PM +0100, Christian Kastner wrote: After a long absence, I'd like to resume my involvement in Debian. For that purpose, I'm currently updating all my packages. Welcome back. Thanks! I've secured sponsorship for some

Re: Summary of Debian Science BOF at DebConf

2010-10-08 Thread Christian Kastner
On 10/08/2010 08:37 AM, Andreas Tille wrote: On Thu, Oct 07, 2010 at 11:21:22PM +0200, Christian Kastner wrote: Thanks. I added a link to the DebianScience/ProblemsToWorkOn page. I had already added a link in the Make better use of DebTags [...] section on that page - did you perhaps miss

Re: Summary of Debian Science BOF at DebConf

2010-10-07 Thread Christian Kastner
Hi Andreas, On 10/04/2010 08:40 AM, Andreas Tille wrote: It would be great if you could take over this job (including propagating your suggestions to a Wiki which could be helpful in the design phase). If the DebTag design might in the end be more compatible to our tasks there might be better

Re: Summary of Debian Science BOF at DebConf

2010-10-04 Thread Christian Kastner
Hi Andreas, On 10/04/2010 08:40 AM, Andreas Tille wrote: On Sun, Oct 03, 2010 at 10:38:14PM +0200, Christian Kastner wrote: I've been meaning to suggest new tags for a while now, but as I didn't have anything to tag lately, it slipped my mind... I'd consider your DebTags suggestion

Re: Summary of Debian Science BOF at DebConf

2010-10-04 Thread Christian Kastner
Hi Charles, On 10/04/2010 05:37 PM, Charles Plessy wrote: Le Mon, Oct 04, 2010 at 12:37:11PM +0200, Christian Kastner a écrit : On 10/04/2010 08:40 AM, Andreas Tille wrote: biology::nuceleic-acids biology::peptidic biology::format:* Off the top of my hat, biology::format:* should

Re: Summary of Debian Science BOF at DebConf

2010-10-03 Thread Christian Kastner
On 10/01/2010 01:47 PM, Andreas Tille wrote: well, I would have loved really cool responses to the summary and todo list of the Debian Science Workshop. Did we completely lost momentum after DebConf or is just everybody busy fixing RC bugs for a soon Squeeze release??? The only result of

Re: neural nets contribution

2010-07-29 Thread Christian Kastner
Hi Pierre-Yves, On 07/20/2010 09:03 PM, Pierre-Yves L'Epérance wrote: My name is Pierre-Yves. I would like to contribute to Debian science. I'm specialized in neural nets, machine learning and pattern recognition. I'm also into stochastic processes, especially diffusion. I can easily program

RFS: pyevolve

2010-06-23 Thread Christian Kastner
My post on debian-mentors and debian-python did not procure any sponsors for pyevolve yet, so I thought maybe mentioning here as well wouldn't hurt: http://lists.debian.org/debian-python/2010/05/msg00086.html Christian -- To UNSUBSCRIBE, email to debian-science-requ...@lists.debian.org with

Re: Integrating Machine Learning Software and Datasets withing debian

2010-06-18 Thread Christian Kastner
Hi Soeren, thanks for the fast review! On 06/18/2010 07:35 AM, Soeren Sonnenburg wrote: On Thu, 2010-06-17 at 16:46 +0200, Christian Kastner wrote On 06/14/2010 05:36 PM, Christian Kastner wrote - Test the shared libraries against third-party code Haven't done this, but seeing

Re: Integrating Machine Learning Software and Datasets withing debian

2010-06-17 Thread Christian Kastner
Hello, I found some time today to finish the packages. On 06/14/2010 05:36 PM, Christian Kastner wrote: On Sun, 2010-06-13 at 23:13 +0200, Christian Kastner wrote: While I ponder a move to debian-science, you can get them here (you want the wip branch): git://scm.kvr.at/git/pkg

Re: Integrating Machine Learning Software and Datasets withing debian

2010-06-17 Thread Christian Kastner
On 06/16/2010 09:02 AM, Andreas Tille wrote: I also would like to stress here that the prospective packages need a _Pkg-_Description field. The package python-scikits-statsmodels was using a Description field which had overriden the Description field of the metapackage itself. Perhaps I

Re: Integrating Machine Learning Software and Datasets withing debian

2010-06-15 Thread Christian Kastner
On 06/15/2010 08:26 AM, Andreas Tille wrote: I added you to the Blends project (even if I have not seen any request for join - seems to have failed somehow). So you should be able to inject your patches. Done, thanks. Christian -- To UNSUBSCRIBE, email to

Re: Integrating Machine Learning Software and Datasets withing debian

2010-06-14 Thread Christian Kastner
On 06/14/2010 12:02 PM, Soeren Sonnenburg wrote: On Sun, 2010-06-13 at 23:13 +0200, Christian Kastner wrote: On 06/12/2010 08:31 PM, Soeren Sonnenburg wrote: MPIKmeans liblinear and/or libocas I've filed an ITP for both liblinear (#575788) and libocas (#575789). The initial packaging

Re: Integrating Machine Learning Software and Datasets withing debian

2010-06-14 Thread Christian Kastner
On 06/14/2010 04:17 PM, Andreas Tille wrote: On Mon, Jun 14, 2010 at 12:02:39PM +0200, Soeren Sonnenburg wrote: I've filed an ITP for both liblinear (#575788) and libocas (#575789). The initial packaging is done, but the build process -- properly building shared libraries -- still needs some

Re: Integrating Machine Learning Software and Datasets withing debian

2010-06-14 Thread Christian Kastner
On 06/14/2010 06:54 PM, Yaroslav Halchenko wrote: Would you mind creating an account on alioth [1] and requesting (given your fresh alioth login name) commit rights for blends repository [2] (I think there should be no heavy objections ;) ), and committing yourself (now and in the future ;))?

Re: Integrating Machine Learning Software and Datasets withing debian

2010-06-13 Thread Christian Kastner
On 06/12/2010 08:31 PM, Soeren Sonnenburg wrote: On Sat, 2010-06-12 at 14:34 +0200, Christian Kastner wrote: On Thu, 10 Jun 2010, Yaroslav Halchenko wrote: In addition, having heard Andrea Tille's talk about debian blends http://blends.alioth.debian.org/science/tasks/machine-learning I

Re: Integrating Machine Learning Software and Datasets withing debian

2010-06-12 Thread Christian Kastner
(apologies if quoting is broken, I wasn't subscribed yet at that point, and the archives are only available via the web interface) On Thu, 10 Jun 2010, Yaroslav Halchenko wrote: On Thu, 10 Jun 2010, Soeren Sonnenburg wrote: we have been setting up freshmeat like repositories for machine learning