ematics Division, Stop 8911
>> 100 Bureau Drive
>> Gaithersburg, MD 20899-8911
>>
>>
>> ___
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>> de...@open-mpi.org
>> http://www.open-mpi.org/mailman/listinfo.cgi/devel
>
>
> So the size is of type MPI_OFSET_KIND which is INTEGER*8 (signed). There is
> still a mismatch between of C and the Fortran version (size_t vs. ssize_t on
> my platform), but let's save this for later.
>
> george.
>
> On Dec 20, 2010, at 14:48 , Edgar Gabriel w
values, and there is no implication in any document
> I know of that it should be.
>
> Regards,
> Nick Maclaren.
>
>
>
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int
)
Thanks
Edgar
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Feedback is highly welcome.
Thanks
Edgar
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Department of Computer Science University of Houston
Philip G. Hoffman Hall, Room 524Houston, TX-77204, USA
Tel: +1 (713) 743-3857
the code has been committed in r25079. Let us know if there are any
issues, compilation problems etc. I also work on an FAQ entry as has
been suggested on the teleconf last week.
Thanks
Edgar
On 8/12/2011 3:09 PM, Edgar Gabriel wrote:
> WHAT: add the ompio io module and new parallel
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---
>> +AC_DEFUN([MCA_ompi_fbtl_posix_CONFIG],[
>> +AC_CHECK_HEADER([aio.h],
>> +[fbtl_posix_happy="yes"],
>> +[fbtl_posix_happy="no"])
>> +
>> +AS_IF([test "$fbtl_posix_happy" = "yes"],
>> +
ain/openmpi-1.7a1/ompi/mca/fcoll/static/fcoll_static_file_write_all.c:929:
> first defined here
>
>
> Any suggestions?
> Ralph
>
>
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sorry, should be fixed with the last commit...
Thanks
Edgar
On 2/28/2012 8:37 AM, Edgar Gabriel wrote:
> I'll look into this...
>
> Thanks
> Edgar
>
> On 2/28/2012 8:36 AM, Ralph Castain wrote:
>> I tried to build the trunk this morning on a machine where the fc
tic_file_read_all’:
> fcoll_static_file_read_all.c:74: warning: ‘sorted_file_offsets’ may be used
> uninitialized in this function
>
>
>
>
> ___
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; @@ -42,6 +42,7 @@
>
> sources = \
> io_ompio.h \
> +io_ompio_nbc.h \
> io_ompio.c \
> io_ompio_component.c \
> io_ompio_module.c \
> ___
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> s...@open-mpi.org
> http://www.open
: *** [all-recursive] Error 1
make[1]: Leaving directory `/home/h2/gabriel/openmpi-1.7rc4/ompi'
make: *** [all-recursive] Error 1
Thanks
Edgar
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Department of Computer Science University of H
e.am. As a result, it wasn't pulled to the tarball.
>>
>> Pavel (Pasha) Shamis
>> ---
>> Computer Science Research Group
>> Computer Science and Math Division
>> Oak Ridge National Laboratory
>>
>>
>>
>>
>>
>>
>> On Oct 2
ran fine. Also runs clean on
> the Mac. However, in both those cases, I had left IO romio enabled.
>
> Now on odin, I always disable-io-romio. So I tried deliberately enabling it,
> and everything works. So this appears to be something that the IO work has
> broken.
>
> Edgar:
ild static
>
> I'm not sure what, if any, parallel file system might be present. In the case
> that works, I just built with no configure args other than prefix. ompi_info
> shows both romio and mpio built, but nothing more about what support they
> built internally.
>
&
10/30/2012 8:29 AM, Edgar Gabriel wrote:
> ok, I'll look into this. I noticed a problem with static builds on
> lustre file systems recently, and I was wandering whether its the same
> issue or not. But I'll check what's going on.
>
> THanks
> Edgar
>
> On
ter how I configure it. No earthly idea
> what happened.
>
> Ignore these droids
>
>
> On Oct 30, 2012, at 7:28 AM, Edgar Gabriel wrote:
>
>> ok, so a couple of things.
>>
>> I still think it is the same issue that I observed 1-2 days ago. Could
&
error: implicit declaration of function
'ompi_ibv_free_device_list'
make[2]: *** [sbgp_ibnet_component.lo] Error 1
make[2]: *** Waiting for unfinished jobs
make[1]: *** [all-recursive] Error 1
make: *** [all-recursive] Error 1
Thanks
Edgar
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as far as I can tell right now, yes, its the final thing...
Thanks
Edgar
On 10/30/2012 2:05 PM, Ralph Castain wrote:
> Grrbloody verb @##$@$.
>
> Okay, I'll make that edit. Is that the last thing required to fix this
> problem?
>
> On Oct 30, 2012, at 11:57 A
O COMMITS IN LAST YEAR**
> adkulkar: Abhishek Kulkarni
> afriedle: Andrew Friedley **NO COMMITS IN LAST YEAR**
> timattox: Tim Mattox **NO COMMITS IN LAST YEAR**
>
> U. Houston
> =
> edgar:Edgar Gabriel
> vvenkatesan:Vishwanath Venkatesan
>
> Mellanox
&g
because there's serious discussions afoot to switch
> OMPI's main SVN repo to Git, and I want to get a feel for the current
> landscape out there.
>
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Department of Computer Scie
art
>
> Tel: ++49(0)711-685-87203
> email: nietham...@hlrs.de
> http://www.hlrs.de/people/niethammer
>
>
>
> ___
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>
> post:
>> http://www.open-mpi.org/community/lists/devel/2014/05/14852.php
>
> ___ devel mailing list
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> http://www.open-mpi.org/mailman/listinfo.cgi/devel Link to this post:
> http://www.open-m
tside your
> organizations is going to build against it - so what did it
> accomplish to push the code into the repo?
>
> Mind you, I'm not saying I'm staunchly opposed - just trying to
> understand how it benefits anyone.
>
>
> On May 27, 2014, at 11:28 AM, Edgar
On 5/27/2014 2:46 PM, Ralph Castain wrote:
>
> On May 27, 2014, at 12:27 PM, Edgar Gabriel
> wrote:
>
>> I'll let ORNL talk about the STCI component itself (which might
>> have additional reasons), but keeping the code in trunk vs. an
>> outside github/merc
alph Castain <mailto:r...@open-mpi.org>> wrote:
>
>>
>> On May 27, 2014, at 12:50 PM, Edgar Gabriel > <mailto:gabr...@cs.uh.edu>> wrote:
>>
>>>
>>>
>>> On 5/27/2014 2:46 PM, Ralph Castain wrote:
>>>>
>>>>
lto:de...@open-mpi.org>
> >> Subscription: http://www.open-mpi.org/mailman/listinfo.cgi/devel
> >> Link to this post:
> http://www.open-mpi.org/community/lists/devel/2014/05/14904.php
> >>
> > ___
gt;
> Are there any other topics that people wanted to remote in to? Fair warning:
> remote attendance is "ok" via webex, but it's no substitute for being there.
>
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Depa
it to ensure it
>>> gets covered?
>>>
>>>
>>> On Jun 19, 2014, at 10:36 AM, Edgar Gabriel wrote:
>>>
>>>> If possible, I would like to attend remotely the discussion about OMPIO
>>>> as well.
>>>>
>>>>
sorry, let me be more precise for Wednesday, I have time before 12pm on
Wednesday.
Thanks
Edgar
On 6/19/2014 2:52 PM, Edgar Gabriel wrote:
> the best time for me would be either Wednesday morning (basically any
> time), or Thursday morning before 11am central.
>
> Thanks
> Edg
o do that mostly
correctly.
Thanks
Edgar
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Tel: +1 (713) 743-3857
e hierarch isn't currently selected by default (you must
specifically
elevate hierarch's priority to get it to run), there's no danger
that users
will run into this problem in default runs.
But clearly the problem needs to be fixed, and therefore we need a
bug
to track it.
On
, whether for 1.3.0 or 1.3.1 I leave that
up to others to decide...
Thanks
Edgar
Edgar Gabriel wrote:
I'm already debugging it. the good news is that it only seems to appear
with trunk, with 1.3 (after copying the new tuned module over), all the
tests pass.
Now if somebody can tell me a trick o
routine and cids aren't being recycled properly.
Brian
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ded case back on, that is?
remember that its not the communicator id allocation that is failing at
this point, so the question is do we have to 'validate' a cid with the
pml before we declare it to be ok?
Thanks
Edgar
Brian
On Thu, 30 Apr 2009, Edgar Gabriel wrote:
cid'
On Thu, 30 Apr 2009, Edgar Gabriel wrote:
Brian W. Barrett wrote:
When we added the CM PML, we added a pml_max_contextid field to the
PML structure, which is the max size cid the PML can handle (because
the matching interfaces don't allow 32 bits to be used for the cid.
At the same time
fine on
previous versions of OMPI. It only hangs on the 1.3 line when the cid
reaches 65536.
-david
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On Apr 30, 2009, at 12:28 PM, Edgar Gabriel wrote:
cid's are in fact not recycled in the block algorithm. Th
hanks
Ralph
On Fri, May 1, 2009 at 6:08 AM, Edgar Gabriel
wrote:
David,
is this code representative for what your app is doing?
E.g. you have a base communicator (e.g. MPI_COMM_WORLD)
which is being 'split', freed again, split, freed again
etc. ? i.e. the i
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pparently I'm the only user of this function. :)
Geoffrey
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Depa
ims that I am at the newest revision. What am I doing wrong?
Thanks
Edgar
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Tel:
ok, forget about it, mea culpa. Rerunning autogen can work wonders :-)
Edgar Gabriel wrote:
I have currently a problem compiling the trunk. configure runs through
correctly, but when starting make I get the following error:
gabriel@salmon:~/ompi/trunk> make
make: *** No rule to make tar
long devel meeting, perhaps they might be
motivated...?
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eiver side), which seems to be consistent with two other bug
reports currently being discussed on the mailing list. I could reproduce
the hang with both sm and tcp, so its probably not a btl issue but
somewhere higher.
Thanks
Edgar
Thomas Ropars wrote:
Edgar Gabriel wrote:
Two short questions: d
there is a ticket on that topic already (#2009), and I just added some
comments to that...
Jeff Squyres wrote:
On Sep 10, 2009, at 7:12 PM, Edgar Gabriel wrote:
so I can confirm that I can reproduce the hang, and we (George, Rainer
and me) have looked into that and are continue digging.
I
just wanted to give a heads-up that I *think* I know what the problem
is. I should have a fix (with a description) either later today or
tomorrow morning...
Thanks
Edgar
Edgar Gabriel wrote:
so I can confirm that I can reproduce the hang, and we (George, Rainer
and me) have looked into that
_COMM_WORLD, new_group, &testComm);
MPI_Barrier(testComm);
MPI_Finalize();
return 0;
}
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it will be available in 1.3.4...
Thanks
Edgar
Chris Samuel wrote:
Hi Edgar,
- "Edgar Gabriel" wrote:
just wanted to give a heads-up that I *think* I know what the problem
is. I should have a fix (with a description) either later today or
tomorrow morning...
I see that chang
(but simpler
than) the coll framework.
I've started an hg for this work:
http://bitbucket.org/jsquyres/ompi-topo-fixes/
Comments?
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hu, 6 May 2010 16:12:30 -0500 (CDT)
> Received: from localhost (localhost [127.0.0.1])
> by mail.hlrs.de (Postfix) with ESMTP id C959F680A01A;
> Thu, 6 May 2010 23:12:26 +0200 (CEST)
> X-Virus-Scanned: amavisd-new at hlrs.de
> Received: from mail.hlrs.de ([127.0.0.1])
>
be
> inside the communicator code).
>
> https://svn.open-mpi.org/trac/ompi/ticket/2477
>
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^
*** Error code 1
Stop.
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in the 1.7, 1.8 and 1.10 series ROMIO remains the default. In the
upcomgin 2.x series, OMPIO will be the default, except for Lustre file
systems, where we will stick with ROMIO as the primary resource.
Regarding performance comparison, we ran numerous tests late last year
and early this year.
grep ompio
Am I doing something wrong, or are these options not supported in
these versions?
kindest regards
Mike
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Link to this post:
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2 PM, Edgar Gabriel wrote:
The default MPI I/O library has changed in the 2.x release to OMPIO for
ok, I am now doing I/O on my own hard drive... but I can test over NFS
easily. For Lustre, I will have to produce a reduced example out of our
test suite...
most file systems. I can look into that pro
I think I found the problem, I filed a pr towards master, and if that
passes I will file a pr for the 2.x branch.
Thanks!
Edgar
On 7/8/2016 1:14 PM, Eric Chamberland wrote:
On 08/07/16 01:44 PM, Edgar Gabriel wrote:
ok, but just to be able to construct a test case, basically what you are
On 08/07/16 03:14 PM, Edgar Gabriel wrote:
I think I found the problem, I filed a pr towards master, and if that
passes I will file a pr for the 2.x branch.
Thanks!
Edgar
On 7/8/2016 1:14 PM, Eric Chamberland wrote:
On 08/07/16 01:44 PM, Edgar Gabriel wrote:
ok, but just to be able to
I'll put it on my to do list to write the configure logic for that, shouldn't be too difficult. Thanks for the report.Edgar___
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My guess would be that both aspects (sorting + CID allocation) could be
a problem.
There was a loong time back an effort to convert the sequence of
allgather + qsort into a distributed sort (based on a paper by Moody et.
al. where he demonstrated the benefits of this approach). We didn't get
Rolf,
thanks for catching that, it is now fixed on the trunk and Jeff is
moving it right now to v1.0 and v1.1
Best regards
Edgar
Rolf Vandevaart wrote:
Repost because I did not see it in the archives after a day.
Rolf Vandevaart wrote On 05/09/06 17:32,:
We believe there is a minor bug in
to come out.
if ( NULL == array_of_errcodes ) {
return OMPI_ERRHANDLER_INVOKE(comm, MPI_ERR_ARG,
FUNC_NAME);
}
Looks like this has already been fixed for MPI_Comm_spawn().
Rolf
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Hi,
sorry for the delay on your request.
There are two things which have to do in order to make a client/server
example work with Open MPI right now (assuming you are using
MPI_Comm_connect/MPI_Comm_accept)
First, you have to start the orted daemon in a persistent mode, e.g.
orted --persist
ay.
Ralph
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Lisandro,
do you have an example for the extended collective operations tests
which fail? It would help track down the problem. I had a quick look at
our implementation but I can not find an obvious problem, so an example
would be extremely helpful.
Thanks
Edgar
- Some extended collectiv
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Gleb Natapov wrote:
On Tue, Sep 11, 2007 at 10:00:07AM -0500, Edgar Gabriel wrote:
Gleb,
in the scenario which you describe in the comment to the patch, what
should happen is, that the communicator with the cid which started
already the allreduce will basically 'hang' until
o have the libnbc integration done either this week or next
as an example. We're still far enough away from v1.3 release that
this does not impact any release plans with VT.
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way.
mfg Tobias Hilbrich
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that it's
bad to free GROUP_EMPTY. I agree that this is somewhat counter to the
rest of the MPI philosophy of not freeing predefined handles, though.
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uf {
err = MPI_ERR_ARG;
} else {
OMPI_CHECK_DATATYPE_FOR_SEND(err, datatype, count);
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ss then an arbitrary value can be passed as
argument."
As you can see on the second paragraph, the standard claims that an
arbitrary value can be passed.
george.
On Feb 4, 2008, at 8:17 AM, Edgar Gabriel wrote:
George,
I hate to say this, but I don't think that this is correct.
tions - all are welcome!
Ralph
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nt used", or
alternatively a flag that indicates "all nodes below are -not- to be used".
Implementation isn't too hard once I have that...
On 3/3/08 9:44 AM, "Edgar Gabriel" wrote:
Ralph,
could this mechanism be used also to exclude a node, indicating to never
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raries that are out there.
- R.
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Philip G. Hoffm
My next steps are to try to run this with the latest trunk and to narrow
down the failing case.
--td
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recall the name of the site)
Are there others?
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l mailing list
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Un
gar
Thanks,
Tim
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Fax: +49 711 678 7626e-mail:gabr...@hlrs.de
==
MPI_COMM_WORLD, &Win);
+
+MPI_Finalize();
+return 0;
+}
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I would like to appologize for this email, I obviously mixed up to email
compose windows :-)
Edgar
Edgar Gabriel wrote:
Hi Hatem,
I am very probably gone today by 5.30, can we maybe reschedule our
meeting for tomorrow, maybe 11am?
Best regards
Edgar
brbar...@osl.iu.edu wrote:
Author
we are having recently problems running trunk with openib component
enabled on one of our clusters. The problem occurs right in the
initialization part, here is the stack right before the segfault:
---snip---
(gdb) where
#0 mca_btl_openib_tune_endpoint (openib_btl=0x762a40,
endpoint=0x7d9660)
?
Thanks
Edgar
On 08/28/2014 04:19 PM, Edgar Gabriel wrote:
we are having recently problems running trunk with openib component
enabled on one of our clusters. The problem occurs right in the
initialization part, here is the stack right before the segfault:
---snip---
(gdb) where
#0
samuel
shiqing
swise
tkordenbrock
vasily
vvenkates
vvenkatesan
yaeld
yosefe
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Edgar Gabriel
Associate Professor
Parallel Software Technologies Lab http://pstl.cs.uh.edu
Department of Computer Science University of Houston
Philip G. Hoffman Hall, Room 524Houston, T
^
This is with gcc (MacPorts gcc49 4.9.1_0) 4.9.1
Ralph
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Edgar Gabri
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problem was not there roughly two weeks back the last time I
tested. I did verify that the the function listed there has an
OMPI_DECLSPEC before its definition.
Thanks
Edgar
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Edgar Gabriel
Associate Professor
Parallel Software Technologies Lab http://pstl.cs.uh.edu
Department of Computer
I am
not aware that it is illegal to call a function of a component from
another component.
Thanks
Edgar
On Nov 25, 2014, at 8:07 AM, Edgar Gabriel
wrote:
Has something changed recently on the trunk/master regarding
OMPI_DECLSPEC? The reason I ask is because we get now errors about
On 11/25/2014 11:31 AM, Ralph Castain wrote:
On Nov 25, 2014, at 8:24 AM, Edgar Gabriel mailto:gabr...@cs.uh.edu>> wrote:
On 11/25/2014 10:18 AM, Ralph Castain wrote:
Hmmm…no, nothing has changed with regard to declspec that I know
about. I’ll ask the obvious things to check:
* doe
function pointers will be NULL for ROMIO. Just want to make sure this is
ok with everybody.
Thanks
Edgar
On 11/25/2014 11:43 AM, Ralph Castain wrote:
On Nov 25, 2014, at 9:36 AM, Edgar Gabriel wrote:
On 11/25/2014 11:31 AM, Ralph Castain wrote:
On Nov 25, 2014, at 8:24 AM, Edgar
4 11:43 AM, Ralph Castain wrote:
>>
>>> On Nov 25, 2014, at 9:36 AM, Edgar Gabriel mailto:gabr...@cs.uh.edu>> wrote:
>>>
>>> On 11/25/2014 11:31 AM, Ralph Castain wrote:
>>>>
>>>>> On Nov 25, 2014, at 8:24 AM, Edgar
http://www.open-mpi.org/community/lists/devel/2014/12/16397.php
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С Уважением, Поляков Артем Юрьевич
Best regards, Artem Y. Polyakov
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I checked with the debugger, that it did skip the entire section
On 12/2/2014 9:04 AM, Jeff Squyres (jsquyres) wrote:
Oy -- I thought we fixed that. :-(
Are you saying that configure output says that ltdladvise is not found?
On Dec 2, 2014, at 9:59 AM, Edgar Gabriel wrote:
didn't wa
is set on the 1.8 series (1.8 series checkout was from Nov. 20, so if
something changed in between the result might be different).
On 12/2/2014 9:27 AM, Artem Polyakov wrote:
2014-12-02 20:59 GMT+06:00 Edgar Gabriel mailto:gabr...@cs.uh.edu>>:
didn't want to interfere with
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