[O] how do you get an OPTIONS value during export?

Thanks, John --- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnkitchin http://kitchingroup.cheme.cmu.edu

Re: [O] [Orgmode] Slow speed of week and month views

came across the mother of all demos recently: http://dougengelbart.org/events/1968-demo-highlights.html. It was inspired by the early Memex ideas. > > * John Kitchin wrote: >> >> One is to use the new dynamic module capability to write an org parser in >> C, or a dedicated

Re: [O] [Orgmode] Slow speed of week and month views

ional dependencies. Maybe one could do something similar to keep an agenda cache that is persistent and updated via hook functions. Thoughts? John ------- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsbur

[O] ox-ipynb in a new repo

export backend to make Jupyter notebooks in IPython and R. John --- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnkitchin http://kitchingroup.cheme.cmu.edu

Re: [O] MWE for BibLaTex and org-ref?

r, >>> hyperref=true,backref=true,maxcitenames=3,url=true,backend=biber,natbib=true] >>> {biblatex} >>> >>> and then use >>> >>> bibliographystyle:authoryear >>> >>> I'm now just getting the following error: >>>

Re: [O] MWE for BibLaTex and org-ref?

. Best wishes, John --- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnkitchin http://kitchingroup.cheme.cmu.edu On Wed, Jul 12, 2017 at 9:59 AM, Loris Bennett wrote

Re: [O] mimetype for orgmode files

That would work fine for me. Let me know the url to that note when you update it so I can use it as a primary source for the github registration. Bastien writes: > Hi John, > > John Kitchin writes: > >> Could we come to an agreement on "text/x-org" or "text/x

Re: [O] bug?

All I thought should happen is that the invisible text adjacent to the point would be edited (except for the {}). Other than the edge case where there is no first headline, it seems to work ok as far as I can tell. Nicolas Goaziou writes: > Hello, > > John Kitchin writes: >

Re: [O] exporting org to docx

elete-file might cause that and have pushed fixes to scimax for them. They may have been the cause (although I don't know why mine would have worked, and it didn't for you, the ox-word versions should have been the same probably). John --- Professor John Kitch

Re: [O] exporting org to docx

ia-latex-pandoc-to-docx-and-open"))) > funcall-interactively(helm-M-x nil > #("ox-export-via-latex-pandoc-to-docx-and-open" 0 43 (match-part > "ox-export-via-latex-pandoc-to-docx-and-open"))) > call-interactively(helm-M-x nil nil) > command-execute(helm-M-

Re: [O] exporting org to docx

body-only options) (if (file-exists-p docx-file) (progn > (delete-file docx-file))) (shell-command (format "pandoc -s -S %s%s\"%s\" -o > \"%s\"" biboption csl tex-file docx-file)) (delete-file temp-bib) > (org-open-file docx-file (quote (16 > ox-ex

Re: [O] Mouse-over on bibliographic citation

be causing this problem. Do you have a bibliography link in the file you are working in? Sharon Kimble writes: > John Kitchin writes: > >> this is a bug in the current org-mode 9.0.8. You have to revert it to org >> 9.0.7 for now. It has been fixed, but I am not sure wh

Re: [O] rounding (up)

0.975 | > #+TBLFM: $2=$1*0.15; > > > | 3.25 | 0.49 | > | 6.5 | 0.97 | > #+TBLFM: $2=$1*0.15;%.2f > > Is there a way to obtain > > | 3.25 | 0.49 | > | 6.5 | 0.98 | > #+TBLFM: $2=$1*0.15;%.2f > > That is to replace rounding down to rounding up? > > Than

Re: [O] Mouse-over on bibliographic citation

this is a bug in the current org-mode 9.0.8. You have to revert it to org 9.0.7 for now. It has been fixed, but I am not sure when it will show up. John --- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University

Re: [O] mimetype for orgmode files

. "text/x-org")'. > > Maybe that is for Org-Mode. > > It is :) > https://lists.gnu.org/archive/html/emacs-orgmode/2011-01/msg00977.html > > If official would mean registered with IANA, then it’s not. > https://www.iana.org/assignments/media-types/media-types.xhtm

[O] mimetype for orgmode files

Is there an official mimetype for orgmode files? John --- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnkitchin http://kitchingroup.cheme.cmu.edu

[O] link fontification issue in org 9.0.8

e :htmlize-link) ((and (pred functionp) f) (funcall f)) (_ `(:uri ,link))) 'font-lock-multiline t))) John --- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnkitchin http://kitchingroup.cheme.cmu.edu

[O] bug?

first heading if I try to type anything. I also get this same error in org 9.0.7. It only happens with the 3 wrapped in {}. That seems like a bug to me. -- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268

Re: [O] Bibliograph:ref.bib vs. \printbibliograpy (WAS: Re: > Citations with org-ref in apa style)

--- > > ONLY AT VFEmail! - Use our Metadata Mitigator to keep your email out of the > NSA's hands! > $24.95 ONETIME Lifetime accounts with Privacy Features! > 15GB disk! No bandwidth quotas! > Commercial and Bulk Mail Options! -- Professor John Kitchin Doherty Hall

Re: [O] Bibliograph:ref.bib vs. \printbibliograpy (WAS: Re: Citations with org-ref in apa style)

gt; > >> > > Have you tried? What happens? >> > Well, to be honest, I don't know what to replace the line in >> > question >> > with. I'm a novice both in LaTeX and in org-mode/org-ref. >> > Lars >> > >> > References >> > >> > 1. >> > http://mirrors.ibiblio.org/CTAN/macros/latex/contrib/biblatex-contrib/biblatex-apa/biblatex-apa.pdf >> > 2. http://kitchingroup.cheme.cmu.edu/ >> > 3. mailto:l...@lamasti.net >> -- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnkitchin http://kitchingroup.cheme.cmu.edu

Re: [O] How to get rid of first line indent?

The C-c n binding is not defined in org-mode though as far as I know. That suggests it is something outside of org-mode doing that. John --- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA

Re: [O] How to get rid of first line indent?

ptical this command is what is doing it, because I also see this happen occasionally. Are you sure it isn't because of org-indent-mode? John --- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburg

Re: [O] Custom keymaps on org blocks

In case anyone would like to try this themselves, I documented what I tried here: http://kitchingroup.cheme.cmu.edu/blog/2017/06/10/Adding-keymaps-to-src-blocks-via-org-font-lock-hook/ John --- Professor John Kitchin Doherty Hall A207F Department of Chemical

Re: [O] Custom keymaps on org blocks

Nicolas Goaziou writes: > Hello, > > John Kitchin writes: > >> On the other hand, there are times when I am working on a document that has >> a lot of short code blocks, e.g. for lecture notes or blog posts, where it >> is sufficiently tedious to me to switch in an

Re: [O] insert cell inside an org-mode table?

>> will be 6 columns by about 60 rows, so having the ability to shift rows >> downwards from inserting a cell would be vital to its successful usage. > > This is not built-in but you can look here at the last example: > "Rearrange one or more field within the same row

Re: [O] insert cell inside an org-mode table?

writes: > John Kitchin writes: > >> I don't totally understand what you want to do. You can insert a row or >> column into a table. >> >> org-table-insert-column >> org-table-insert-row >> >> Are you trying to do something different than tha

Re: [O] insert cell inside an org-mode table?

I don't totally understand what you want to do. You can insert a row or column into a table. org-table-insert-column org-table-insert-row Are you trying to do something different than that? John --- Professor John Kitchin Doherty Hall A207F Departme

Re: [O] Custom keymaps on org blocks

ossible for users to change this if they wanted to. The same way they can customize the face of a code block for different languages. John ------- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University P

Re: [O] Custom keymaps on org blocks

Nicolas Goaziou writes: > Hello, > > John Kitchin writes: > >> Is there any interest in having custom keymaps on org blocks? >> >> The idea I had is to have the option to make the major-mode keymaps be >> active on the src blocks. > > There is already

Re: [O] Custom keymaps on org blocks

Grant Rettke writes: > On Mon, Jun 5, 2017 at 4:53 PM, John Kitchin wrote: >> Is there any interest in having custom keymaps on org blocks? >> >> The idea I had is to have the option to make the major-mode keymaps be >> active on the src blocks. > > You want Po

[O] Custom keymaps on org blocks

(org-no-properties lang) org-src-block-keymaps) I have tried this, and seems ok, and I wondered if anyone had an opinion for or against this idea. -- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnkitchin http://kitchingroup.cheme.cmu.edu

Re: [O] (org-insert-heading "hello")

arg is for the prefix arg.You want this: (org-insert-heading) (insert "hello") John --- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnki

Re: [O] Error exporting org-ref.org to LaTeX (was: Re: Warnings while installing org-ref)

ere undefined references. > > Thanks and regards, Lars > > >> On Sat, May 27, 2017 at 4:52 PM Lars Bjørndal <[1]l...@lamasti.net> >> wrote: >> >> On Fri, May 26, 2017 at 04:06:52PM -0400, John Kitchin wrote: >> > I pushed a bunch of co

Re: [O] org to static site?

1160 DCB3 > > > > > > > > ------ > Russell Adamsrlad...@adamsinfoserv.com > > PGP Key ID: 0x1160DCB3 http://www.adamsinfoserv.com/ > > Fingerprint:1723 D8CA 4280 1EC9 557F 66E8 1154 E018 1160 DCB3 > > -- John --- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnkitchin http://kitchingroup.cheme.cmu.edu

Re: [O] Error exporting org-ref.org to LaTeX (was: Re: Warnings while installing org-ref)

at 4:52 PM Lars Bjørndal wrote: > On Fri, May 26, 2017 at 04:06:52PM -0400, John Kitchin wrote: > > I pushed a bunch of commits today to clean up a lot of these. There are > > still a few that I don't know how to get rid of, but it should be a lot > > cleaner now. >

Re: [O] Warnings while installing org-ref

s'; > use `push' or `cl-pushnew' > org-ref-helm.el:306:39:Error: `add-to-list' can't use lexical > var `matches'; > use `push' or `cl-pushnew' > org-ref-helm.el:380:47:Warning: reference to free variable > `org-latex-prefer-user-labels' > > Compiling file > /home/tstl/.emacs.d/elpa/org-ref-20170523.1821/org-ref-pdf.el at\ > Fri May 26 14:59:59 2017 > > In end of data: > org-ref-pdf.el:248:1:Warning: the following functions are not known to > be defin\ > ed: > pdf-view-assert-active-region, pdf-view-active-region-text, > pdf-view-deactivate-region > > Lars -- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnkitchin http://kitchingroup.cheme.cmu.edu

Re: [O] Warnings while installing org-ref

t use lexical var > `matches'; > use `push' or `cl-pushnew' > org-ref-helm.el:317:54:Error: `add-to-list' can't use lexical var > `matches'; > use `push' or `cl-pushnew' > org-ref-helm.el:306:39:Error: `add-to-lis

Re: [O] Citations with org-ref in apa style

John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnkitchin http://kitchingroup.cheme.cmu.edu On Thu, May 25, 2017 at 3:57 PM, Lars Bjørndal wrote: > On Thu, May 25, 2017 at 05:36:07PM +0100, Eric S Fraga wr

Re: [O] returning propertized strings

scenarios where temporary properties would be useful. Are there other reasons having properties on strings in the output are not desirable? John --- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA

Re: [O] returning propertized strings

On Sat, May 20, 2017 at 9:46 PM, Charles C. Berry wrote: > On Sat, 20 May 2017, John Kitchin wrote: > > If I run this block I get test as a result, but all its properties have >> been stripped. >> >> #+BEGIN_SRC emacs-lisp :results drawer >> (propertize "te

[O] returning propertized strings

anyone know where this happens and if it can be avoided? Thanks, John ------- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnkitchin http://kitchingroup.cheme.cmu.edu

Re: [O] org-ref + ASME

t; $24.95 ONETIME Lifetime accounts with Privacy Features! > 15GB disk! No bandwidth quotas! > Commercial and Bulk Mail Options! -- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnkitchin http://kitchingroup.cheme.cmu.edu

Re: [O] possible bug exporting blocks?

thanks! John --- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnkitchin http://kitchingroup.cheme.cmu.edu On Fri, May 19, 2017 at 10:30 AM, Nicolas Goaziou wrote

[O] possible bug exporting blocks?

. Thanks, -- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnkitchin http://kitchingroup.cheme.cmu.edu

[O] fixing level in md export

ells get rendered out of context, so this ends up making all levels be level 1. Any ideas on how to remedy this? Or why it might have stopped working? -- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnkitchin http://kitchingroup.cheme.cmu.edu

Re: [O] Migrating to org-mode - question on lists

-14 Sun 15:12] TODO a minor improvement that I haven't done yet * CANCELLED something I decided isn't worth doing CLOSED: [2017-05-14 Sun 15:13] * CLARIFY something that needs further clarification John --- Professor John Kitchin Doherty Hall A207F De

Re: [O] Save-excursion that works with org visibility?

t; '(todo . " %i %?-20(org-get-task-project)"))) > === > In the code above we have to make all headings visible first with > org-content because outline-up-heading works only on visible nodes. -- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnkitchin http://kitchingroup.cheme.cmu.edu

Re: [O] Support for vertical writing directly in Org Mode

hese tags. > > #+END_VERTICAL > > Or maybe it should be called #+BEGIN_LANDSCAPE / #+END_LANDSCAPE, I am not > sure :). > > Thanks for all your time and help, > Marek -- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon Un

Re: [O] A small patch for org.el to fix error in clojure babel src block code ref

I think I have just fixed it. The offending command was trying to get an org-element in the special edit buffer which wasn't in org-mode. Its not clear why it worked in some codes and not others though! John --- Professor John Kitchin Doherty Hall A207F Depar

Re: [O] A small patch for org.el to fix error in clojure babel src block code ref

On Tue, May 9, 2017 at 6:51 AM, Nicolas Goaziou wrote: > org-store-link-functions That is a function in org-ref. I will check it out this morning. Thanks for the pointer to the root of the issue! John --- Professor John Kitchin Doherty Hall A207F Departm

Re: [O] Function to return content of item

paragraph (rather than all paragraphs in that item). Maybe "item" is > the wrong work, is "node" better? > > Maybe I need to write some code using the org motion commands in order to > manually identify the region that I'm looking for. > > Many thanks

Re: [O] Function to return content of item

> It seems to me likely that such a function would exist, but I haven't been > able to find it in the documentation. > > Many thanks > Richard -- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsbur

Re: [O] Handling custom link types for html export in v 9.0 - Replacement for deprecated `org-add-link-type`?

h is for a new thread: both in 8 and 9, > while they export what I need, actually do not display the image in > org buffer. The reason seem to be the org-display-inline-images is > only looking for the "file" link but I need to debug that first) > > > On Tue, Apr 18, 2017 at

Re: [O] Handling custom link types for html export in v 9.0 - Replacement for deprecated `org-add-link-type`?

' instead. > > My problem is I have no idea how to, in a practical sense, use > `org-link-set-parameters` to define a custom link type "img" and > handle it's image handling in both org buffer and Html publish. > > My question is, are there any links and example

Re: [O] ANN: org-sticky-header

don't forget which heading the >> partially displayed entry at the top belongs to. >> >> It seems to be working well so far. Please let me know if you have any >> feedback. >> >> Thanks, >> Adam >> >> >> -- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnkitchin http://kitchingroup.cheme.cmu.edu

Re: [O] Org-babel for sending emails

BEGIN_SRC message FROM: TO:... > > #+END_SRC > > and executing above send the email. > > Thank you in advance for your responses. -- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnkitchin http://kitchingroup.cheme.cmu.edu

Re: [O] How to obtain the headline level from org-element-at-point

issue with > it. Will post a reply if I find anything interesting. > > Bests regards, > > Jeremie > > > > > > > >> > >> > >> >> John >> >> --- >> Professor John Kitchin >> Doherty Hall A207F >> De

Re: [O] How to obtain the headline level from org-element-at-point

what do you mean it only considers level 1 headlines? It seems to work on all headlines for me. The email subject doesn't seem related to the body you can get the level like this. (org-element-property :level (org-element-at-point)) John --- Professor

Re: [O] Scatter-gather idea

he tag idea may be the best way. Thanks to all for the replies. > > Yes, sorry: I was talking about tags, not about agenda bulk-marking. Although > you > can add an arbitrary org file to the agend with `C-c [', do what you need to > do, > and then remove it with `C-c ]'. -- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnkitchin http://kitchingroup.cheme.cmu.edu

Re: [O] problem with org-ref after upgrading org-mode from 8.3 to 9.0.5

require(bibtex-completion) > byte-code("\306\307!\210\306\310!\210\306\311!\210\306\312!\210\313 > \314\211 \314 :\203f -- John --- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnkitchin http://kitchingroup.cheme.cmu.edu

Re: [O] problem with org-ref after upgrading org-mode from 8.3 to 9.0.5

acs 3.3 GNU Emacs 25.1.1. I looked for let-plist using > list-packages and found: > let-alist 1.0.4 built-in > > What is going wrong? > > Johannes -- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pit

Re: [O] Scatter-gather idea

complete operation sequences leave marks in place, when they might >be useless. > > 3. If the gathered headlines are at different levels, the resulting >gathered outline will not be sensible and will require manual fixing. > > Comments welcome. This doesn't look espec

Re: [O] evil-mode and org

ave whatever DEC was using for an > editor, but I didn't know how to use it instantly. What to do? What to do? > I tried running TECO. Yes, it had TECO! Saved! (Sort of.) > > Why use vim if emacs is already built into your fingertips? -- Professor John Kitchin D

Re: [O] How to include menu entry in C-x C-e

(?c "As manuscript PDF with comments" ox-manuscript-build-with-comments) (?a "As submission archive" ox-manuscript-make-submission-archive Mark Meyer writes: > Hi, > how do I include a menu entry from my module, when people hit C-x

Re: [O] parsing of emphasis versus links

1] Settings using calc: links: > > #+begin_src emacs-lisp >(defun esf/org-mode-calc-settings () > (setq calc-embedded-open-formula "\\[\\[calc:]\\[" > calc-embedded-open-new-formula "[[calc:][" >calc-embedded

Re: [O] Tags completion with Helm

ot;[?]" >(initial candidates disappeared) > > regards, > Alex > > John Kitchin writes: > > > have you tried these settings: > > > > (setq helm-mode-fuzzy-match t > > helm-completion-in-region-fuzzy-match t) > > > > According to h

Re: [O] Complex conversion of text to org table

| | | >> > | | | | >> > | 2 | tablespoons | butter, | melted | | >> > | | | | >> > | cooking | spray | | | | >> > | | | | >> > >> > >> > as you can see it got the amount (1/2) and the unit (cup) right >> > yet the actual ingredients is cut into several columns >> > >> > i dont really know how to deal with this. is there a more >> > intelligent way of auto directing the conversion to split it the >> > correct way? >> > >> > if not any suggestions on how to convert it in a better way? >> > perhaps a command to quick delete the separator (|) across all >> > the column? >> > >> > thx alot in advance >> > >> > Z >> > >> > >> > >> >> -- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnkitchin http://kitchingroup.cheme.cmu.edu

Re: [O] Tags completion with Helm

, that I've stepped into with this > case? Can anyone point me to some comprehensible direction? > > regards, > Alex -- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnkitchin http://kitchingroup.cheme.cmu.edu

Re: [O] org-ref and the minibuffer

tion shown in the minibuffer when > the cursor (or the mouse pointer) is on top of an org-ref bibliography link? > The default seems to be a formatted version of the citation, which > includes authors (all of them), title, etc. I would like just to see > the title. > Thanks! >

Re: [O] New markup for revising manuscripts

gt; challenging would that be ? I am still learning lisp :) > > Cheers, > M >> On Mar 11, 2017, at 1:22 PM, John Kitchin wrote: >> >> This is probably not feasible with links. that is also a challenge with >> Eric's markup approach. One way is to use visual

[O] org-export-string-as issue

SULTS: : : # second heading : Am I missing something that would keep the heading level correct? Or is this expected behavior? Thanks, -- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-78

Re: [O] New markup for revising manuscripts

; Thanks John, > > Works like a charm. Any idea how to write comments that spans multiple lines ? > > cheers, > M >> On Mar 11, 2017, at 7:55 AM, John Kitchin wrote: >> >> it looks like you forgot to include format in the (eq ..) sexp. >> >> (org-link-set

Re: [O] workflow, matlab+latex in org file

--- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnkitchin http://kitchingroup.cheme.cmu.edu On Sat, Mar 11, 2017 at 11:50 AM, Uwe Brauer wrote: > >>> "John" == John Kitchin

Re: [O] workflow, matlab+latex in org file

er >> x = [1, 2, 3, 4, 5]; >> fprintf('|%d', x) >> #+END_SRC > >> #+RESULTS: >> :RESULTS: >> | 1 | 2 | 3 | 4 | 5 | >> :END: > >> It is not much better output wise without the fprintf, but that seems > to

Re: [O] New markup for revising manuscripts

I like this a lot! On March 11, 2017, at 8:39 AM, Eric S Fraga wrote: On Friday, 10 Mar 2017 at 20:33, Doyley, Marvin M. wrote: > Hi there, > > When revising manuscripts, I usually highlight the changes (response > to reviewer) in red. I use typically do this as follows: > (1) #+latex_header: \n

Re: [O] workflow, matlab+latex in org file

> matlab output for non symbolic variables is just awful > > As in > #+begin_src matlab :results output > clear all; > x=[ 1 2 2 3 4] > #+end_src > > #+RESULTS: > : > : x = > : > : 1 2 2 3 4 > : > > Does anybody know how to get a better

Re: [O] New markup for revising manuscripts

t; (format "\\textcolor{red}{%s}" keyword > :face '(:foreground "red")) > > >> On Mar 10, 2017, at 4:47 PM, John Kitchin wrote: >> >> You can wait for it... make a colored link ;): >> http://kitchingroup.cheme.cmu.edu

Re: [O] workflow, matlab+latex in org file

I get the right wrapper around the results block in the org-file. I did have to add :exports results to the header to get it to export though. John --- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University

Re: [O] New markup for revising manuscripts

max/blob/master/cm-mods.el I was working on some ways to use the criticmarkup in conjunction with git diffs to automatically make these kinds of diffs. I can't say I am fully satisified by any of these solutions (that is why there are so many of them ;) John --

Re: [O] org-mode markup vs rst for general content

It is on Melpa I think: https://melpa.org/#/ox-clip On Fri, Mar 10, 2017 at 11:24 AM Uwe Brauer wrote: > >>> "John" == John Kitchin writes: > >> Sometimes I just use ox-clip to copy org-mode into word with > formatting. >> It works pretty wel

Re: [O] org-mode markup vs rst for general content

; maybe your documents are more complex. > > Uwe Brauer -- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnkitchin http://kitchingroup.cheme.cmu.edu

Re: [O] org-mode markup vs rst for general content

/blog/2013/09/27/Publishing-to-blogofile-using-org-mode/ If I was starting from scratch I would do something similar, but might go more for Nikola, Pelican, or maybe one of the org-emacs solutions that are around. Uwe Brauer writes: >>>> "John" == John Kitchin writes: >

Re: [O] org-mode markup vs rst for general content

familiar with both can help and shed some light, > since, both markups have decent support withing Emacs itself? > > > Sincerely, > Gour -- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnkitchin http://kitchingroup.cheme.cmu.edu

Re: [O] Elpy in python code blocks

I am not sure what you mean. (elpy-enable) in an init file does it for me. It is only active in the special edit mode, e.g. C-c ' in the code block. John --- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon Unive

Re: [O] Structure info in minibuffer

f? > > Cheers, > > Loris > > -- > This signature is currently under construction. > > > -- John --- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnkitchin http://kitchingroup.cheme.cmu.edu

Re: [O] Where to put dates on meeting headlines

iew from a date-type of query? Russell Adams writes: > I place an active timestamp under my headline for the date/time of the > meeting, and then I always timestamp my notes using inactive > timestamps. They are separate in the agenda but can be enabled. > > > On Sat, Feb 25, 201

Re: [O] Where to put dates on meeting headlines

rials/advanced-searching.html Charles C. Berry writes: > On Fri, 24 Feb 2017, John Kitchin wrote: > >> Suppose I use a heading to store notes on a meeting. >> >> Is there a canonical location to put a date so I could search for them >> later? >> >&g

[O] Where to put dates on meeting headlines

headline I might have, and later I might want a report of all meetings in the month of February. * Group meeting <2017-02-24 Fri> :meeting: Notes about today's meeting... Thanks! -- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pit

Re: [O] Python loops with ":results output"

't have that issue for me. > > Thank you; unfortunately, this seems to work with Jupyter/Ipython > kernels running as a service, which adds quite an overhead to the > workflow. > > -- > Seb > > > -- John --- Professor John Kitchin D

Re: [O] Python loops with ":results output"

On Mon, Feb 20, 2017 at 11:04 PM, Seb wrote: > #+BEGIN_SRC python :session :results output :exports results > for i in range(3): > print("Iter {0}".format(i)) > > #+END_SRC > Try using ob-ipython. It doesn't have that issue for me. John -

Re: [O] How to change "References" headline in pdf with org-ref?

-thebibliography-environm http://tex.stackexchange.com/questions/12597/renaming-the-bibliography-page-using-bibtex This worked for me: #+latex: \renewcommand{\refname}{Whatever floats your boat} John --- Professor John Kitchin Doherty Hall A207F Department of Chemical

Re: [O] Exporting blocks of text completely verbatim

Isn't #+BEGIN_EXAMPLE Long block #+END_EXAMPLE what you want? John --- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnkitchin http://kitchingroup.cheme.cmu.edu

Re: [O] org-ref glitch with 2 bib files

5) of > 2016-03-20 on trouble, modified by Debian > > System is Linux, Debian Jessie. > > I'm no expert, so I may well be missing something, so let me know if you > need more information or whatever. > > Thanks, > > Alan -- Professor John Kitchin Doherty Hall A207F D

Re: [O] Dr Wozniak’s tasklist implementation

ke that implemented? I couldn’t find anything. > > If not, how hard would it be? Where would it be best to start? > > Thank you! > > [1] https://www.supermemo.com/articles/tasklists.htm -- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carneg

Re: [O] src block: 'C-c C-c can do nothing useful here' if cursor on blank line

ince blank lines are common, I'd expect not to have to make > *sure* I'm on an actual line of code and that being anywhere in a src > block should work. > > Thoughts? > > > Thanks, > John -- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnkitchin http://kitchingroup.cheme.cmu.edu

Re: [O] VM for org-based reproducible environment?

e details right away. > Would love to steal someone else's setup as I currently know nothing about > docker... > > Thanks, > Matt -- Professor John Kitchin Doherty Hall A207F Department of Chemical Engineering Carnegie Mellon University Pittsburgh, PA 15213 412-268-7803 @johnkitchin http://kitchingroup.cheme.cmu.edu

Re: [O] Link type for HTML5 videos

://kitchingroup.cheme.cmu.edu/blog/2016/11/04/New-link-features-in-org-9/ for how to make a link, try it and report back if it is useful. Scott Randby writes: > On 01/22/2017 01:22 PM, John Kitchin wrote: >> What would these links look like? And what should they render too? > > I wasn't suggesting sup

Re: [O] Link type for HTML5 videos

What would these links look like? And what should they render too? On Sun, Jan 22, 2017 at 1:09 PM Scott Randby wrote: > On 01/22/2017 12:15 PM, Arun Isaac wrote: > > > > > > It would be nice to have a link type to export HTML5 videos. Currently, > > > the only way to insert videos is to use th

Re: [O] [org-ref] how to tweak display of links and entries

Christian Wittern writes: > Dear John, > > Thanks for your answer. > > On 01/11/2017 10:33 PM, John Kitchin wrote: >> >> There is not a way to hook or define a format for this that I know of. >> For helm-bibtex, you might be able to redefine or advise >>

Re: [O] [org-ref] how to tweak display of links and entries

ll probably not be what you expect. You can turn off the full display like this: #+BEGIN_SRC emacs-lisp (loop for cite in org-ref-cite-types do (org-link-set-parameters cite :display nil)) #+END_SRC > > Any help appreciated, > > Christian -- Professor John Kitchin Doherty Hall

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