Re: [O] [BABEL] BUG - error on tangling - disappears when changing the filename

2013-09-27 Thread Rainer M Krug
Forgot: tried with 8.2 stable release and with version from git - both the same. Rainer M Krug writes: > Hi > > I have a strange error when tangling. > > I have a large org file with several code blocks tangling in about > 20 R files and one bash file. Usually tangling wo

Re: [O] [BABEL] BUG - error on tangling - disappears when changing the filename

2013-09-27 Thread Rainer M Krug
-file-name? I can't remove the "when" as I am also tangling some files which do not have any comment characters (DESCRIPTION file in R packages). Any suggestions welcome, Rainer Rainer M Krug writes: > Forgot: tried with 8.2 stable release and with version from git - bo

Re: [O] [BABEL] BUG - error on tangling - disappears when changing the filename

2013-09-30 Thread Rainer M Krug
Eric Schulte writes: > Rainer M Krug writes: > >> OK - narrowed it down to a post tangle hook which I need for proper >> debugging of R (jumping to source line in org file and not tangled R file): >> >> , >> | #+begin_src emacs-lisp >> | (defvar

Re: [O] [Babel] Padlines

2013-10-01 Thread Rainer M Krug
his bug report, there was a problem in my previous patch in >> this thread. I've just pushed up a fix which should solve this problem. > > Confirmed! > > Thanks a lot. > > Best regards, > Seb <#secure method=pgpmime mode=sign> -- Rainer M. Krug email: RMKruggmailcom

Re: [O] [Babel] Padlines

2013-10-01 Thread Rainer M Krug
Eric Schulte writes: > Rainer M Krug writes: > >> Hi >> >> I assume this is related to this discussion and the patches: after >> updating this morning, get an error message after tangling: >> variable padline void. This goes away after reverting to 8.2 2

Re: [O] How to install recent documentation of org 8.2?

2013-10-03 Thread Rainer M Krug
t;> Christoph Lange, School of Computer Science, University of Birmingham >> http://cs.bham.ac.uk/~langec/, Skype duke4701 >> >> → Mathematics in Computer Science Special Issue on “Enabling Domain >> Experts to use Formalised Reasoning”; submission until 31 October. >> http://cs.bham.ac.uk/research/projects/formare/pubs/mcs-doform/ >> > > > > <#secure method=pgpmime mode=sign> -- Rainer M. Krug email: RMKruggmailcom

Re: [O] Deactivate babel source block

2013-10-07 Thread Rainer M Krug
-buffer) >> (comment-region) >> (org-edit-src-exit)) >> #+end_src >> >> Apart from it not working (Wrong number of arguments), this would have >> been a dirty one in any case. Now I thought there must be a better way >> by setting/un-setting the respective header arguments in an automated >> way. Is this already possible with org-mode version 8.2? >> >> Best Regards, >> Michael >> >> <#secure method=pgpmime mode=sign> -- Rainer M. Krug email: RMKruggmailcom

[O] [babel] Feature request - WAS: org babel before excute hook

2013-10-14 Thread Rainer M Krug
he Kafka Pandemic: http://thekafkapandemic.blogspot.com >> >> The disease DOES progress. MANY people have died from it. ANYBODY can >> get it. >> >> Denmark: free Karina Hansen NOW. >> <#secure method=pgpmime mode=sign> -- Rainer M. Krug email: RMKruggmailcom

Re: [O] org-mode in the wild

2013-11-04 Thread Rainer M Krug
f Chemical Engineering > Carnegie Mellon University > Pittsburgh, PA 15213 > 412-268-7803 > http://kitchingroup.cheme.cmu.edu <#secure method=pgpmime mode=sign> -- Rainer M. Krug email: RMKruggmailcom

Re: [O] ODT export produces odt file which MS Word 2007 can't open

2013-11-25 Thread Rainer M Krug
>> Using LibreOffice, I re-saved the file you shared to use >> OpenDocument-v1.1 format. Does Word import this file without >> errors? >> >> Btw, the files created by the ODT exporter are marked as 1.2. > - -- Rainer M. Krug, PhD (Conservation Ecology, SUN), MS

[O] Keyboard shortcut - is there a principle behind them?

2013-12-06 Thread Rainer M Krug
seem to be that way...). Thanks, Rainer - -- Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology, UCT), Dipl. Phys. (Germany) Centre of Excellence for Invasion Biology Stellenbosch University South Africa Tel : +33 - (0)9 53 10 27 44 Cell: +33 - (0)6 85 62 59 98 Fax :

Re: [O] Keyboard shortcut - is there a principle behind them?

2013-12-06 Thread Rainer M Krug
ably a lot > of people will disagree, it doesn't make sense for me to have > `previous-line' on C-p. So I swap C-p and C-h: (keyboard-translate > ?\C-h ?\C-p) (keyboard-translate ?\C-p ?\C-h) Absolutely true - but I usually try to keep the customization to a minimum and to use

Re: [O] How can I convert a org file to a flowchart

2013-12-06 Thread Rainer M Krug
>> >> Now I use org file record all the node labels, How can I convert this >> org to a flowchar if i use tag and link to record all the construct? > > AFAIK you can't. True - but a custom exporter to do this (export to plantuml format?) would rally be great Cheers, Rain

Re: [O] [ESS] Keyboard shortcut - is there a principle behind them?

2013-12-09 Thread Rainer M Krug
l > > On Dec 6, 2013 3:02 AM, "Rainer M Krug" <mailto:rai...@krugs.de>> wrote: > > Hi > > one alternative subject could be "because it is Friday"... > > I am using org-mode and ess regularly, and I use quite a few > keyboard shortcuts, but

Re: [O] How can I convert a org file to a flowchart

2013-12-09 Thread Rainer M Krug
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 On Sat Dec 7 06:54:53 2013, Feng Shu wrote: > Rainer M Krug writes: > >> On Fri Dec 6 15:07:56 2013, Bastien wrote: >>> Hi Feng, >>> >>> Feng Shu writes: >>> >>>> I have t

[O] Bash script to update - only make when update there?

2013-12-10 Thread Rainer M Krug
which works nicely, but I would like to only execute the "make update" if git updated something - I am sure this is possible, but how? Thanks, Rainer - -- Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology, UCT), Dipl. Phys. (Germany) Centre of Excellence fo

Re: [O] emphasis inside source block?

2013-12-10 Thread Rainer M Krug
fferent languages. Cheers, Rainer > > Thanks, > > David > - -- Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology, UCT), Dipl. Phys. (Germany) Centre of Excellence for Invasion Biology Stellenbosch University South Africa Tel : +33 - (0)9 53 10 27

Re: [O] Bash script to update - only make when update there?

2013-12-10 Thread Rainer M Krug
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 On 12/10/13, 16:59 , Nick Dokos wrote: > Rainer M Krug writes: > >> Hi >> >> I have a question concerning a bash script to update org (and ess >> in the same way but in a different script). >> >> The

Re: [O] Bash script to update - only make when update there?

2013-12-10 Thread Rainer M Krug
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 On 12/10/13, 18:12 , Achim Gratz wrote: > Achim Gratz writes: >> Rainer M Krug writes: >>> git checkout master make update >> >> This doesn't update at all since you never do a "git pull" on >> mas

Re: [O] Bash script to update - only make when update there?

2013-12-10 Thread Rainer M Krug
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 On 12/10/13, 20:31 , Nick Dokos wrote: > Rainer M Krug writes: > >> On 12/10/13, 16:59 , Nick Dokos wrote: >>> ... Be that as it may, you can try something like this hack >>> (those are backticks around the git pull -

Re: [O] Bash script to update - only make when update there?

2013-12-12 Thread Rainer M Krug
a return code from git which I could simply compare evaluate if there has something updated... Well - I will stay with my simple update script. Thanks, Rainer > > > On 12/10/13, Rainer M Krug wrote: > > > On 12/10/13, 20:31 , Nick Dokos wrote: >>>> Rainer M Krug wr

Re: [O] Bash script to update - only make when update there?

2013-12-13 Thread Rainer M Krug
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 On 12/13/13, 01:26 , Suvayu Ali wrote: > On Thu, Dec 12, 2013 at 10:00:22AM +0100, Rainer M Krug wrote: >> >> On 12/10/13, 21:50 , Samuel Wales wrote: >>> gitpullv () { #echo \=== maybe need to grab tags head=`git >>&

Re: [O] Set or update timestamp after evaluation of code block?

2015-09-22 Thread Rainer M Krug
))) > > > (add-hook 'org-babel-after-execute-hook > 'j-add-ts) > > ;(remove-hook 'org-babel-after-execute-hook > ; 'j-add-ts) > #+END_SRC Perfect! I added it to my emacs.org just now and I relly like it. Thanks a lot, Rainer > >

[O] PROPERTIES attached to results blocks - Was: Set or update timestamp after evaluation of code block?

2015-09-22 Thread Rainer M Krug
(x) (x x))) > “Life has become immeasurably better since I have been forced to stop > taking it seriously.” --Thompson > > > On Mon, Sep 21, 2015 at 1:43 PM, Rainer M Krug wrote: >> John Kitchin writes: >> >>> Here is one approach: >>> >>>

Re: [O] Set or update timestamp after evaluation of code block?

2015-09-22 Thread Rainer M Krug
Rainer M Krug writes: > John Kitchin writes: > >> so picky ;) > > Jup - aren't all org users like that? > >> Maybe something like this will put that stamp in a comment >> that won't export. >> >> #+BEGIN_SRC emacs-lisp >> (def

[O] Tangle including code generating graphics for :results graphics

2015-09-24 Thread Rainer M Krug
+: :prologue "env <- fitBFGS; attach(env)" | :header-args+: :epilogue "detach(env); rm(env)" | :END: ` and this is tangled perfectly - but obviously not the code for plotting. Is there an argument / setting to enable this? Thanks, Rainer -- Rainer M. Krug, PhD (Conserva

[O] [ ] Checkboxes or count of completed TODOs in subtree?

2015-09-24 Thread Rainer M Krug
still under each header? Thanks, Rainer -- Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology, UCT), Dipl. Phys. (Germany) Centre of Excellence for Invasion Biology Stellenbosch University South Africa Tel : +33 - (0)9 53 10 27 44 Cell: +33 - (0)6 85 62 59

Re: [O] Tangle including code generating graphics for :results graphics

2015-09-24 Thread Rainer M Krug
Andreas Leha writes: > Hi Rainer, > > Rainer M Krug writes: >> Hi >> >> Is it possible to tangle an R code block including the code which is >> generating the graphs when using =:results graphics= ? >> >> I would like to tangle these code blocks gen

[O] Solved: [ ] Checkboxes or count of completed TODOs in subtree?

2015-09-24 Thread Rainer M Krug
Suvayu Ali writes: > On Thu, Sep 24, 2015 at 10:41:19AM +0200, Rainer M Krug wrote: >> >> I would like to be able to use something like checkboxes in a tree of >> headers. >> >> I understand that checkboxes only work in simple lists, i.e. not on >> hea

Re: [O] tangle on export

2015-09-24 Thread Rainer M Krug
ntf.printf "Bonjour le monde !\n" > #+end_src > #+BEGIN_SRC sh :exports both :results verbatim > ocamlc -o myprog myprog.ml > ./myprog > #+END_SRC > > where I show a program to be compiled and actually compile it. Is there > a header I should put on the "

Re: [O] Exporter aborts upon encountering even one unresolvable link

2015-09-25 Thread Rainer M Krug
redacted) > E: d...@toedt.com O: +1 (713) 364-6545C: +1 (713) 516-8968 > ​​ > > ​ > Houston, Texas (Central time zone) > > Unless expressly stated otherwise, this message is not intended > to serve as assent to an agreement or other document, whether or not > attached to this

Re: [O] Exporter aborts upon encountering even one unresolvable link

2015-09-25 Thread Rainer M Krug
edt >> <http://www.linkedin.com/in/dctoedt> | Calendar >> <https://www.google.com/calendar/embed?src=dc.to...@toedt.com&mode=WEEK> >> (redacted) >> E: d...@toedt.comO: +1 (713) 364-6545C: +1 (713) 516-8968 >> ​​ >> >> ​ >> Hous

Re: [O] help debugging org-element crashes?

2015-09-25 Thread Rainer M Krug
U Emacs 24.5.1 (x86_64-apple-darwin14.5.0, Carbon Version 157 AppKit > 1348.17) > Org-mode version 8.3.1 (8.3.1-129-ga7c8d2-elpaplus @ > org-plus-contrib-20150921/) > > I've tried reinstalling org-plus-contrib... I have also enabled > org-element-debug. > > Any suggestions o

[O] LaTeX equation align in orgmode?

2015-09-28 Thread Rainer M Krug
array*} --8<---cut here---end--->8--- but eqnarray is apparently bad (see link above). Thanks, Rainer -- Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology, UCT), Dipl. Phys. (Germany) Centre of Excellence for Invasion Biology Stel

[O] BUG?: LaTeX equation align in orgmode? - even in -Q

2015-09-29 Thread Rainer M Krug
Andreas Leha writes: > Hi Rainer, > > Rainer M Krug writes: >> Hi >> >> I would need in a document several equations which are aligned as in >> http://tex.stackexchange.com/a/167908/6941 >> >> How can I use the following latex formula in orgmod

[O] SOLVED: LaTeX equation align in orgmode?

2015-09-29 Thread Rainer M Krug
Eric S Fraga writes: > On Monday, 28 Sep 2015 at 21:10, Rainer M Krug wrote: >> Hi >> >> I would need in a document several equations which are aligned as in >> http://tex.stackexchange.com/a/167908/6941 > > I use align all the time. > >> How can I

[O] "Symbol’s value as variable is void: compile" when export to latex

2015-09-29 Thread Rainer M Krug
nt #4) #("Org-mode version 8.3.1 (release" 0 31 (:parent #5)) (latex-math-block (:parent #5 :post-blank 0) (subscript ... #("8.3.1" 0 5 ...))) #("-283-gf6187d @ " 0 15 (:parent #5)) (italic (:begin 335 :end 353 :contents-begin 336 :contents-end 352 :post-blank 0 :parent #5

Re: [O] bug: latex exporter

2015-09-30 Thread Rainer M Krug
Envoyé de mon iPhone > Le 29 sept. 2015 à 11:37, Charles Millar a écrit : > > Since Monday morning (New York time) I have not been able to export to > pdflatex (worked OK the night before). Instead the message buffer reads > > symbol's value as variable is void - compile > > GNU Emacs 24.3.

Re: [O] "Symbol’s value as variable is void: compile" when export to latex

2015-09-30 Thread Rainer M Krug
Kaushal Modi writes: > Rasmus has fixed this in > http://orgmode.org/cgit.cgi/org-mode.git/commit/?id=679adcaa64613c821b38cd1d34b081640315293a Working - thanks > . > > > > -- > Kaushal Modi > > On Tue, Sep 29, 2015 at 5:11 AM, Rainer M Krug wrote: > >> &

Re: [O] bug: latex exporter

2015-10-01 Thread Rainer M Krug
enience! > > Please try to update to 679adcaa64613c821b38cd1d34b081640315293a (current > head) and let me know if this does not solve the issue. Yup - working again. Thanks Rainer > > Rasmus -- Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology, UCT), Dipl. Phys. (

Re: [O] bug: latex exporter

2015-10-01 Thread Rainer M Krug
Kaushal Modi writes: > It seems as if no one got the email I sent out yesterday, very odd. > On Sep 30, 2015 4:59 PM, "Charles Millar" wrote: This is indeed a twisted and strange thread... > >> I see that Rasmus has fixed this. Thank you. >> >> On 09/

[O] Bug: Error on preview of latex equation [8.3.2 (release_8.3.2-138-g679adc @ /Users/rainerkrug/.emacs.d/org-mode/lisp/)]

2015-10-01 Thread Rainer M Krug
ursive nil :publishing-function ...) ("EBoutput" :base-directory "~/Documents/Projects/EnergyBalance/output/" :base-extension any :publishing-directory "~/Documents/Projects/EnergyBalance/pubHTML/output/"

[O] To compile or not compile - that is the question

2015-10-05 Thread Rainer M Krug
Hi I compiled org before, but would now prefer to use it uncompiled (different emacs versions, debugging). What are the speed implications of not compiling orgmode? I am using tangling a lot - would not be compiling a recognizable slowdown? Thanks, Rainer -- Rainer M. Krug, PhD (Conservation

Re: [O] anyone syncing orgmode calendar with google cal, and if so how?

2015-10-05 Thread Rainer M Krug
hone as the > intermediary. Generally works quite well. I would be using MobileOrg > regardless so calendar synchronisation is a very nice bonus. Interesting - Android or iOS? if iOS - I would like to know how you do it. Cheers, Rainer -- Rainer M. Krug, PhD (Conservation Ecology, SUN),

Re: [O] Exporter aborts upon encountering even one unresolvable link

2015-10-07 Thread Rainer M Krug
edt.com > www.OnContracts.com/About > > Unless expressly stated otherwise, > this message is not intended to serve > as assent to an agreement or other document, > even if attached to this message. > > > On Fri, Sep 25, 2015 at 12:04 AM, Rainer M Krug wrote: > > [portions

[O] BUG in org-lint and tangle

2015-10-19 Thread Rainer M Krug
The following R file causes an crash of the org-lint function and of tangling - backtrace attached. The problem seems to be the missing specification of :exports. --8<---cut here---start->8--- * Test #+begin_src R :exports #+end_src --8<---cut her

[O] Suggestion org-lint - Duplicate NAME

2015-10-22 Thread Rainer M Krug
AOptimMahat" | 2498 high Duplicate (2456, 2498) NAME "fig:fitEachExamplesUAOptimMahat" ` This would make it easier to find the duplicates, especially if they are not in adjacent messages. Cheers, Rainer -- Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservatio

Re: [O] BUG in org-lint and tangle

2015-10-23 Thread Rainer M Krug
I just want to bring this bug to attention again. Confirmed with GNU Emacs 24.5.1 (x86_64-apple-darwin14.5.0, Carbon Version 157 AppKit 1348.17) of 2015-08-28 on Rainers-MacBook-Pro.local starter with -Q obviously there only for tangle. Cheers Rainer Rainer M Krug writes: >

Re: [O] Suggestion org-lint - Duplicate NAME

2015-10-24 Thread Rainer M Krug
Nicolas Goaziou writes: > Hello, > > Rainer M Krug writes: > >> I have a long org document in which I copied around some analysis blocks >> to do the same analysis (and format of results) for different simulation >> parameter combinations. >> >> B

Re: [O] BUG in org-lint and tangle

2015-10-24 Thread Rainer M Krug
Nicolas Goaziou writes: > Hello, > > Rainer M Krug writes: > >> The following R file causes an crash of the org-lint function and of >> tangling - >> backtrace attached. The problem seems to be the missing specification of >> :exports. >> >> >

Re: [O] pdflatex not found?

2015-10-26 Thread Rainer M Krug
Envoyé de mon iPhone > Le 27 oct. 2015 à 01:14, Nick Dokos a écrit : > > Peter Davis writes: > >> Nick Dokos writes: >> >> >>> Peter Davis writes: >>> I'm trying to export PDF from org, but I'm getting the error: pdflatex: Command not found. [3 times] I've che

Re: [O] Some projects

2015-10-27 Thread Rainer M Krug
of pandoc+deps in Debian? I don't know which OS you are using, but just checking on [[https://github.com/jgm/pandoc/releases/1.15.1]] and [[https://github.com/jgm/pandoc/releases/tag/1.15.1.1]]: Windows: 19.7 MB Mac: 27.9 MB Deb: 20.2 MB The 1600MB must be including LaTeX? In Gener

Re: [O] pdflatex not found?

2015-10-27 Thread Rainer M Krug
Peter Davis writes: > Rainer M Krug writes: > >> Envoyé de mon iPhone >> >>> Le 27 oct. 2015 à 01:14, Nick Dokos a écrit : >>> >>> Peter Davis writes: >>> >>>> Nick Dokos writes: >>> ... >>> Yes, probably

Re: [O] pdflatex not found?

2015-10-27 Thread Rainer M Krug
heers, Rainer > > https://github.com/purcell/exec-path-from-shell > > 27/10/15 14:43 tarihinde Peter Davis yazdı: >> Rainer M Krug writes: >> >>> Envoyé de mon iPhone >>> >>>> Le 27 oct. 2015 à 01:14, Nick Dokos a écrit : >>>>

Re: [O] pdflatex not found?

2015-10-27 Thread Rainer M Krug
DE/WM. In my > current installation (Fedora 21), that is done by > /etc/X11/xinit/xinitrc-common, which does this: > > [ -r $HOME/.profile ] && . $HOME/.profile > > Maybe OS X has a "hidden" mechanism like this? Nope - this is a "feature"

Re: [O] Some projects

2015-10-27 Thread Rainer M Krug
ably fine, but for users of > some OSs, such as Archlinux or even worse some OS where pandoc is not > generally available as a precompiled package, it’s a really, really big > dependency. I may still be the best option, though. > > Rasmus -- Rainer M. Krug, PhD (Conservation

Re: [O] pdflatex not found?

2015-10-27 Thread Rainer M Krug
tions started by the DE/WM. In my >> current installation (Fedora 21), that is done by >> /etc/X11/xinit/xinitrc-common, which does this: >> >> [ -r $HOME/.profile ] && . $HOME/.profile >> >> Maybe OS X has a "hidden" mechanism like this? >&g

Re: [O] pdflatex not found?

2015-10-27 Thread Rainer M Krug
Nick Dokos writes: > Rainer M Krug writes: > >> Fatma Başak Aydemir writes: >> >>> I do not know the reasons but I had the same problem in the past on OS X. >> >> In from Yosemite onwards, programs started from the finder / spotlight / >> gui (how

Re: [O] pdflatex not found?

2015-10-27 Thread Rainer M Krug
Peter Davis writes: > Rainer M Krug writes: > >>> >>> Sorry. It's OS X 10.10.5, using GNU Emacs 24.5.1 >> >> I thought so. >> >> OK - you have pdflatex in the terminal? If yes, you have to bring the >> PATH from the terminal into em

Re: [O] pdflatex not found?

2015-10-27 Thread Rainer M Krug
;> Hence .profile is the common denominator. > > Yes, .profile is the common denominator ... except where it isn't. And on OS X everything is different anyway and changes from time to time. Cheers, Rainer > > Thanks, > -pd > > -- Rainer M. Krug, PhD (Conservatio

[O] Markup (=, ~) in word?

2015-10-29 Thread Rainer M Krug
---cut here---end--->8--- Export will be mainly LaTeX, but maybe also html. Thanks, Rainer -- Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology, UCT), Dipl. Phys. (Germany) Centre of Excellence for Invasion Biology Stellenbosch Univer

Re: [O] Markup (=, ~) in word?

2015-10-29 Thread Rainer M Krug
> ? > > not perfect, but... > > On Thu, Oct 29, 2015 at 7:06 AM, Rainer M Krug wrote: > >> Hi >> >> I guess this is not possible (and has been asked before, but I can't >> find it t the moment...)- but how can I export the following markup? >>

Re: [O] Markup (=, ~) in word?

2015-10-29 Thread Rainer M Krug
Göktuğ Kayaalp writes: > On Thu, Oct 29 2015 at 2:21:17 pm EEST, Rainer M Krug > wrote: >> Matt Price writes: >> >>> #+BEGIN_VERBATIM >>> simASM.=SITE=.=STRATEGY=.=BUDGET=.=FIREREGIME=.=JOBID=.=ARRAYID= >>> #+END_VERBATIM >> >> The o

Re: [O] Markup (=, ~) in word?

2015-10-29 Thread Rainer M Krug
"Charles C. Berry" writes: > On Thu, 29 Oct 2015, Rainer M Krug wrote: > >> Matt Price writes: >> >>> #+BEGIN_VERBATIM >>> simASM.=SITE=.=STRATEGY=.=BUDGET=.=FIREREGIME=.=JOBID=.=ARRAYID= >>> #+END_VERBATIM >> >> The other way r

Re: [O] Markup (=, ~) in word?

2015-10-30 Thread Rainer M Krug
Rasmus writes: > Rainer M Krug writes: > >> Hi >> >> I guess this is not possible (and has been asked before, but I can't >> find it t the moment...)- but how can I export the following markup? >> >> simASM.=SITE=.=STRATEGY=.=BUDGET=.=FIREREGIME=.=

[O] Wrong results from R source block when returning a list

2015-11-03 Thread Rainer M Krug
types (R list and org table)? Is this mentioned in the manual? Rainer -- Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology, UCT), Dipl. Phys. (Germany) Centre of Excellence for Invasion Biology Stellenbosch University South Africa Tel : +33 - (0)9 53 10 27 44

[O] Combine tables which are results from calculations?

2015-11-03 Thread Rainer M Krug
1 | 1 | | 2 | 2 | 2 | | 3 | 3 | 3 | || 4 | 4 | || 5 | 5 | || 6 | 6 | || 7 | 7 | || 8 || || 9 || || 10 || --8<---cut here---end--->8--- How can I combine t1, t2 and t3 column wise? Thanks, Rainer

Re: [O] Combine tables which are results from calculations?

2015-11-05 Thread Rainer M Krug
Rick Frankel writes: > On Wed, Nov 04, 2015 at 10:03:48AM +0100, Rainer M Krug wrote: >> Rick Frankel writes: >> >> > On Tue, Nov 03, 2015 at 02:18:05PM +0100, Rainer M Krug wrote: >> >> Hi >> >> >> >> Considering the following example

Re: [O] Wrong results from R source block when returning a list

2015-11-05 Thread Rainer M Krug
"Charles C. Berry" writes: > On Tue, 3 Nov 2015, Rainer M Krug wrote: > >> Hi >> >> The following code block returns a wrong table / list: >> >> >> #+begin_src R :results value list >> list(1:10, 1:5) >> #+end_src >> >>

[O] Org and Citations / References / Bibliography

2015-11-05 Thread Rainer M Krug
es to work, i.e. find something from the .bib file. Any suggestions what I can do, any simple / minimalistic init.el file which I can merge into my config? Thanks, Rainer Footnotes: [1] http://kitchingroup.cheme.cmu.edu/blog/2014/05/13/Using-org-ref-for-citations-and-references/ -- Rain

Re: [O] Org and Citations / References / Bibliography

2015-11-06 Thread Rainer M Krug
1" . org-ref-open-bibtex-pdf) ;; ("f12" . org-ref-open-in-browser) ) ;; optional but very useful libraries in org-ref (use-package doi-utils :disabled t :ensure t ) (use-package jmax-bibtex :disabled t :ensure t ) (use-package pubmed :disabled t :ensure t ) (use-pac

Re: [O] Org and Citations / References / Bibliography

2015-11-06 Thread Rainer M Krug
John Kitchin writes: > Rainer M Krug writes: > >> It does now. I went through the setup process slowly again using the >> README.org and the org-ref.org in >> [[https://github.com/jkitchin/org-ref]] as guidelines and it worked. >> >> But I could not install an

Re: [O] Org and Citations / References / Bibliography

2015-11-16 Thread Rainer M Krug
Grant Rettke writes: > On Fri, Nov 6, 2015 at 8:12 PM, Rainer M Krug wrote: >> I am still struggling with larger configurations (like org-mode and ESS, >> which >> have different sections in my emacs.org), but I am getting there. > > Take it slow. Looking forward to

[O] [BUG] in export to odt -

2015-11-20 Thread Rainer M Krug
The following .org file produces an invalid .odt file upon export to odt because of the footnote in the footnote: --8<---cut here---start->8--- #+TITLE: Footnote in footnote produces invalid .odt #+AUTHOR: Rainer M. Krug * A Footnote in a Footnot

Re: [O] [BUG] in export to odt -

2015-11-20 Thread Rainer M Krug
Rasmus writes: > Rainer M Krug writes: > >> The odt is attached for reference. > > Please also provide an odt document with the expected, working result. > (I could not produce such a document in LO within 20s, but perhaps it’s > possible). I am not a LibreOffice / M

Re: [O] [BUG] in export to odt -

2015-11-20 Thread Rainer M Krug
Rasmus writes: > Rainer M Krug writes: > >> I tried in LibreOffice, and indeed it does not seem to be possible. I >> don't know what the convention is, but I don't like that an invald .odt >> file is produced. Maybe give a warning about "incompatible fe

[O] [odt-export] Setting Text Colour for odt export

2015-11-20 Thread Rainer M Krug
rt, but this does obviously does not org for odt export. What can I use to achieve the same for odt export? Thanks Rainer -- Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology, UCT), Dipl. Phys. (Germany) Centre of Excellence for Invasion Biology Stellenbosch University

Re: [O] [odt-export] Setting Text Colour for odt export

2015-11-20 Thread Rainer M Krug
Rasmus writes: > Hi, > > Rainer M Krug writes: > >> I am using >> >> \color{red} some red text \color{black} and we continue with black >> >> to set the text colour for sections in my document for LaTeX export, but >> this does obviously does

[O] LATEX text in figure environment

2015-11-24 Thread Rainer M Krug
be redone and further info added} | \end{figure} ` But it is really not org-ish (caption specified as LaTeX, citation as latex, environment specified). Is there a way to achieve this more org like? Am I missing some #+? Thanks, Rainer -- Rainer M. Krug, PhD (Conservation Ecology, SU

Re: [O] LATEX text in figure environment

2015-11-24 Thread Rainer M Krug
Andreas Leha writes: > Hi Rainer, > > Rainer M Krug writes: >> Hi >> >> I want to add a todo note (from the todonotes package) in a figure >> environment. What I want should look as follow, so that the to note sits >> in the environment (based on [htt

[O] @@latex:...@@ syntax - where can I find info on it?

2015-11-24 Thread Rainer M Krug
(except C-@ which is something completely different) and googling also nothing? Thanks, Rainer -- Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology, UCT), Dipl. Phys. (Germany) Centre of Excellence for Invasion Biology Stellenbosch University South Africa Tel : +33

Re: [O] @@latex:...@@ syntax - where can I find info on it?

2015-11-24 Thread Rainer M Krug
Andreas Leha writes: > Hi Rainer, > > Rainer M Krug writes: >> Hi >> >> I read at tha moment a lot of mails here regarding the @@latex:...@@ (or >> @@html:...@@) syntax. I understand d=that these fragments are only >> inserted when the corresponding backe

Re: [O] LATEX text in figure environment

2015-11-24 Thread Rainer M Krug
Rasmus writes: > Rainer M Krug writes: > >> Hi >> >> I want to add a todo note (from the todonotes package) in a figure >> environment. What I want should look as follow, so that the to note sits >> in the environment (based on [http:/

Re: [O] LATEX text in figure environment

2015-11-25 Thread Rainer M Krug
Andreas Leha writes: > Rainer M Krug writes: >> Rasmus writes: >> >>> Rainer M Krug writes: >>> >>>> Hi >>>> >>>> I want to add a todo note (from the todonotes package) in a figure >>>> environment. What I want

Re: [O] Latex export: How to handle multiple authors, emails, institutes

2015-11-26 Thread Rainer M Krug
Envoyé de mon iPhone > Le 26 nov. 2015 à 16:26, Fatma Başak Aydemir a écrit : > > Hi all, > > I'm trying to write a conference paper which has multiple authors from > multiple institues. I tried to insert author infor by adding the following > block > > #+BEGIN_LaTeX > \author{First Author

Re: [O] Jumping between source blocks in a file

2015-12-02 Thread Rainer M Krug
t so nice when debugging a source block where they are used. Cheers, Rainer > > Regards, > Andreas > > > -- Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology, UCT), Dipl. Phys. (Germany) Centre of Excellence for Invasion Biology Stellenbosch University

Re: [O] Jumping between source blocks in a file

2015-12-02 Thread Rainer M Krug
Rainer M Krug writes: > Andreas Leha writes: > >> Hi Andrew, >> >> Martin Yrjölä writes: >>> Hi Andrew! >>> >>> Andrew Kirkpatrick writes: >>> >>>> If this is deemed useful, I'm happy to make changes suitable for >

Re: [O] Jumping between source blocks in a file

2015-12-02 Thread Rainer M Krug
Andreas Leha writes: > Rainer M Krug writes: >> Rainer M Krug writes: >> >>> Andreas Leha writes: >>> >>>> Hi Andrew, >>>> >>>> Martin Yrjölä writes: >>>>> Hi Andrew! >>>>> >>>

[O] README for bitbucket - export to which format?

2015-12-04 Thread Rainer M Krug
moment I am using text (UTF8) Which works, but I would like to have syntax highlighting and clickable links? Thanks, Rainer -- Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology, UCT), Dipl. Phys. (Germany) Centre of Excellence for Invasion Biology Stellenbosch University

Re: [O] README for bitbucket - export to which format?

2015-12-04 Thread Rainer M Krug
Rasmus writes: > Rainer M Krug writes: > >> There are many formats available for READMEs on bitbucket, but >> unfortunately not org mode (I am staying on bitbucket for private repos >> and move them to github as soon as they can be made public - matter of >> finan

Re: [O] README for bitbucket - export to which format?

2015-12-04 Thread Rainer M Krug
disabled toc export and it works fine. Thanks, Rainer > > Hope that helps. > > Jeroen > > On Friday 2015-12-04 13:38:47 CET, Rainer M Krug wrote: > >> Hi >> >> There are many formats available for READMEs on bitbucket, but >> unfortunately not org mo

Re: [O] README for bitbucket - export to which format?

2015-12-17 Thread Rainer M Krug
Grant Rettke writes: > On Fri, Dec 4, 2015 at 6:38 AM, Rainer M Krug wrote: > > Most Git sites using the Github Flavored Markdown, and there is a > package for that in contrib: =ox-gfm= > > http://orgmode.org/cgit.cgi/org-mode.git/plain/contrib/lisp/ox-gfm.el Thanks - g

Re: [O] blog refurbised: how is it in 2015 ?

2015-12-23 Thread Rainer M Krug
very nice to manage your posts there. Cheers, Rainer > > Thank you > > -- Xavier. -- Rainer M. Krug email: Rainerkrugsde PGP: 0x0F52F982 signature.asc Description: PGP signature

Re: [O] For Org, numbered backups or version control? Which settings?

2015-12-28 Thread Rainer M Krug
Envoyé de mon iPhone > Le 28 déc. 2015 à 13:47, Jorge a écrit : > > Hi. My ~/org folder, with its sub directories, has a total of 13 .org > files. Five of them are agenda files. I set up numbered backup, with > the backups going to a separate directory: ~/auto-backups. For the > most impor

Re: [O] org-file using tramp + babel?

2016-01-15 Thread Rainer M Krug
error: , | /bin/sh: 1: /scp:pogoplug:/tmp/sh-script-81150VZO: not found ` > > > and when I issue `C-h v temporary-file-directory RET' in the buffer of the > remote file, > I get the same `/var/folders/...' which is what `echo $TMPDIR' shows locally. Here I have: , | Its value is "/var/folders/50/wcr5bjwn75q595n6x82gxj28gn/T/" ` Also on Mac, remote is Debian. Cheers, Rainer > > HTH, > > Chuck > > -- Rainer M. Krug email: Rainerkrugsde PGP: 0x0F52F982 signature.asc Description: PGP signature

Re: [O] org-file using tramp + babel?

2016-01-15 Thread Rainer M Krug
ug [2]. I think it would be nice if one could find a fix for this in org. > > Hope this helps, > Martin > > [1] http://www.howardism.org/Technical/Emacs/literate-devops.html#fn.2 > [2] http://lists.gnu.org/archive/html/emacs-orgmode/2013-09/msg00992.html > > -- Rainer M. Krug email: Rainerkrugsde PGP: 0x0F52F982 signature.asc Description: PGP signature

[O] Bug: can not evaluate any code blocks after enabling additional languages [8.3.4 (release_8.3.4-639-gd5a603 @ /Users/rainerkrug/.emacs.d/elpa/25.0/org-20151005/)]

2016-03-10 Thread Rainer M Krug
end struct) (org-list-struct-fix-bul struct prevs) (org-list-struct-fix-ind struct parents) (let ... ... ...))) ((eql type (quote keyword)) (let (... ...) (if ... ...) (let ... ... --rtn)) (message "Local setup has been refreshed")) ((eql type (quote plain-list)) (let* (... ... ... ... ... ...) (cond ... ...) (org-list-write-struct struct

Re: [O] Bug: can not evaluate any code blocks after enabling additional languages [8.3.4 (release_8.3.4-639-gd5a603 @ /Users/rainerkrug/.emacs.d/elpa/25.0/org-20151005/)]

2016-03-10 Thread Rainer M Krug
Sorry for tp: Additional info: Works under Org-mode version 8.3.4 (8.3.4-dist @ /Users/rainerkrug/.emacs.d/elpa/25.0/org-20151005/) Rainer M Krug writes: > * Configuration > Org-mode version 8.3.4 (release_8.3.4-639-gd5a603 @ > /Users/rainerkrug/.emacs.d/elpa/25.0/org-20151005/) &g

Re: [O] Bug: can not evaluate any code blocks after enabling additional languages [8.3.4 (release_8.3.4-639-gd5a603 @ /Users/rainerkrug/.emacs.d/elpa/25.0/org-20151005/)]

2016-03-10 Thread Rainer M Krug
Nicolas Goaziou writes: > Hello, > > Rainer M Krug writes: > >> Debugger entered--Lisp error: (void-function org-babel-get-header) > > This looks like a mixed installation. This function was removed in > development version and code base doesn't use it anymor

Re: [O] Bug: can not evaluate any code blocks after enabling additional languages [8.3.4 (release_8.3.4-639-gd5a603 @ /Users/rainerkrug/.emacs.d/elpa/25.0/org-20151005/)]

2016-03-10 Thread Rainer M Krug
Kyle Meyer writes: > Rainer M Krug writes: > >> Nicolas Goaziou writes: >> >>> Hello, >>> >>> Rainer M Krug writes: >>> >>>> Debugger entered--Lisp error: (void-function org-babel-get-header) >>> >>> This l

<    3   4   5   6   7   8   9   10   11   12   >