Re: [Fink-users] Failure compiling kaptain-0.72-1013

2010-01-06 Thread Martin Costabel
Koen van der Drift wrote: > On Wed, Jan 6, 2010 at 8:29 AM, Scott R. Santos wrote: > >> intermediate.h:49: error: ISO C++ forbids declaration of 'Kaptain' with no >> type > > I think that line is the cuplrit. It works fine on my PPC with 10.5, > so it must be a intel/10.6 related thing. I don't

Re: [Fink-users] Failure compiling kaptain-0.72-1013

2010-01-06 Thread Scott R. Santos
Hi Koen and monipol, Thanks for the quick response on this. The good is that the change to ConfigureParams found the X11 libraries. The bad is that it bombed during the make. Here is the output: sudo fink selfupdate-cvs sudo fink install emboss-kaptain Scanning package description files

Re: [Fink-users] Failure compiling kaptain-0.72-1013

2010-01-06 Thread Scott R. Santos
Hi Koen, Again, thanks for the effort in trying to get emboss-kaptain "fixed" for 10.6 (I'm amazed that you even have time to maintain these packages). I (and the students with Apples in my Advanced Biocomputing class) appreciate it. Also thanks for the suggestion on KEMBOSS. I gave it a

Re: [Fink-users] Failure compiling kaptain-0.72-1013

2010-01-06 Thread Koen van der Drift
On Wed, Jan 6, 2010 at 8:29 AM, Scott R. Santos wrote: > intermediate.h:49: error: ISO C++ forbids declaration of 'Kaptain' with no > type I think that line is the cuplrit. It works fine on my PPC with 10.5, so it must be a intel/10.6 related thing. I don't have much time to look into it, so if

Re: [Fink-users] Failure compiling kaptain-0.72-1013

2010-01-06 Thread Koen van der Drift
Thanks monipol, I have fixed that in cvs. Scott: can you let us know if it works? - Koen. On Jan 5, 2010, at 8:57 PM, monipol wrote: > For the record, the standard fix is to add > > --x-includes=/usr/X11R6/include --x-libraries=/usr/X11R6/lib > > to ConfigureParams. > > On 05/01/2010, at 20:01

Re: [Fink-users] Failure compiling kaptain-0.72-1013

2010-01-05 Thread monipol
For the record, the standard fix is to add --x-includes=/usr/X11R6/include --x-libraries=/usr/X11R6/lib to ConfigureParams. On 05/01/2010, at 20:01, Koen van der Drift wrote: > Scott, > > Thanks for your report. I don't have Snow Leopard, so am unable to > test emboss-kaptain on that system.

[Fink-users] Failure compiling kaptain-0.72-1013

2010-01-05 Thread Scott R. Santos
Hi everyone, Received the following error while compiling kaptain-0.72-1013 as part of emboss-kaptain: The following package will be installed or updated: emboss-kaptain The following 12 additional packages will be installed: autoconf automake1.11 emboss emboss-ajax6-shlibs emboss-nucleus6-sh

Re: [Fink-users] Failure compiling kaptain-0.72-1013

2010-01-05 Thread Koen van der Drift
Scott, Thanks for your report. I don't have Snow Leopard, so am unable to test emboss-kaptain on that system. But more importantly, emboss-kaptain is no longer updated by the developer with newer versions of emboss. I recommend you install kemboss instead which works with the latest version of