Re: [Fink-users] Some remaining problems with *-oct36*

2012-05-03 Thread Dominique Dhumieres
This is now fixed in CVS. ... Confirmed on both counts. Thanks. Dominique -- Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT

[Fink-users] Failed: phase compiling: arpack-ng-atlas-3.1.1-2 failed

2012-05-23 Thread Dominique Dhumieres
On both ppc OSX 10.5 and intel 10.6 updating to arpack-ng-atlas-3.1.1-2 failed ... checking for cheev_... yes configure: error: Cannot find LAPACK libraries ### execution of /tmp/fink.yQR5w failed, exit code 1 Removing runtime build-lock... Removing build-lock package... /sw64/bin/dpkg-lockwait

[Fink-users] Failed: phase compiling: geometry-oct343-1.5.0-1 failed

2012-06-11 Thread Dominique Dhumieres
Updating to geometry-oct343-1.5.0-1 on Package manager version: 0.32.6 Distribution version: selfupdate-rsync Sun Jun 10 16:13:19 2012, 10.6, x86_64 Trees: local/main stable/main stable/crypto unstable/main unstable/crypto Xcode: 3.2.6 Max. Fink build jobs: 2 fials with /sw64/bin/tar

[Fink-users] Failed: phase compiling: octave-atlas-3.0.5-3015 failed

2012-06-11 Thread Dominique Dhumieres
Updating to octave-atlas-3.0.5-3015 on Package manager version: 0.32.6 Distribution version: selfupdate-rsync Sun Jun 10 18:44:20 2012, 10.5, powerpc Trees: local/main stable/main stable/crypto unstable/main unstable/crypto Xcode: 3.1.4 Max. Fink build jobs: 1 failed with /sw/bin/tar

[Fink-users] Some more glithches with octave305

2012-06-18 Thread Dominique Dhumieres
On ppc 10.5 updating odepkg-atlas-oct305 to 0.6.4-5 fails with Failed: Illegal version specification '3.9.11-13' for package atlas-shlibs On this platform and on x86_64 10.6 installing bundle-octave305* fails with Can't resolve dependency liboctave305-gcc47-dev for package

[Fink-users] Failed: phase compiling: fftw3-3.3.2-8 failed

2012-06-21 Thread Dominique Dhumieres
Updating to fftw3-3.3.2-8 on Package manager version: 0.33.2 Distribution version: selfupdate-rsync Thu Jun 21 15:09:30 2012, 10.5, powerpc Trees: local/main stable/main stable/crypto unstable/main unstable/crypto Xcode.app: 3.1.4 Xcode command-line tools: 3.1.4 Max. Fink build jobs: 1 failed

[Fink-users] Failed: phase compiling: ffmpeg-0.7.13-1 failed

2012-06-21 Thread Dominique Dhumieres
Updating to libavutil50-shlibs-0.7.13-1 on Package manager version: 0.30.2 Distribution version: selfupdate-rsync Thu Jun 21 08:55:06 2012, 10.4, powerpc Trees: local/main stable/main stable/crypto unstable/main unstable/crypto Xcode Version: 2.5-1 failed with ... sed 's/$MAJOR/50/'

Re: [Fink-users] Failed: phase compiling: ffmpeg-0.7.13-1 failed

2012-06-21 Thread Dominique Dhumieres
How did you get gcc-4.2 on darwin8? I validated using gcc (4.0.1/apple). The default gcc on this box is 4.0.1, but I have 4.2.1 in /usr/bin/ so it is picked by # Prefer compilation with gcc-4.2 if available if [ -x /usr/bin/gcc-4.2 ]; then ../configure %c --cc=gcc-4.2 else

Re: [Fink-users] Failed: phase compiling: ffmpeg-0.7.13-1 failed

2012-06-21 Thread Dominique Dhumieres
Could you try again with those lines of the CompileScript removed, ... Actually I have moved /usr/bin/gcc-4.2 away and the build has completed. Dominique -- Live Security Virtual Conference Exclusive live event will

[Fink-users] Failed: PatchFile /sw/fink/dists/stable/main/finkinfo/10.4-EOL/sci/matplotlib-py.patch checksum does not match!

2012-06-21 Thread Dominique Dhumieres
David, Another glitch with 10.4-EOL: Failed: PatchFile /sw/fink/dists/stable/main/finkinfo/10.4-EOL/sci/matplotlib-py.patch checksum does not match! Actual: dbd6b6fe0e8bf4ad2115c73d05157783 Expected: 758179e681590f68d65f36344a5e268f TIA Dominique

Re: [Fink-users] Failed: phase compiling: cpan-meta-yaml-pm-0.008-1 failed

2012-06-23 Thread Dominique Dhumieres
Hi David, I have finally solved the proble the old way (aka brute force): (1) I have removed all the installed packages pm586 and dependencies, (2) I have removed all the *pm586* entries in /sw/fink/debs/ (3) I have removed all the *.deb pointed by the symlinks. From this ground state I have

[Fink-users] Another batch of octave glitches

2012-07-05 Thread Dominique Dhumieres
Hi Alex, I have been hit by the following glitches: (1) /sw*/fink/10.4/stable/main/finkinfo/sci/octgpr-oct.info ask for gcc (4.7), but does not find the right dependency. Replacing 4.7 with 4.6 fixes it. (2) There is an extra fi in

[Fink-users] Failed: phase compiling: qrupdate-atlas-1.1.2-4 failed

2012-07-08 Thread Dominique Dhumieres
Updating to qrupdate-atlas-1.1.2-4 on Package manager version: 0.30.2 Distribution version: selfupdate-rsync Sun Jul 8 16:18:10 2012, 10.4, powerpc Trees: local/main stable/main stable/crypto unstable/main unstable/crypto Xcode Version: 2.5-1 failed with ... gfortran-fsf-4.7 -fimplicit-none

Re: [Fink-users] Failed: phase compiling: qrupdate-atlas-1.1.2-4 failed

2012-07-08 Thread Dominique Dhumieres
Alex, I'm not supporting 10.4, ... I know. It was FYI. Dominique -- Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers

Re: [Fink-users] Another batch of octave glitches

2012-07-08 Thread Dominique Dhumieres
Hi Alex, (3) On ppc 10.5 updating to octave-atlas-3.6.0-8 fails with ... Thanks for the report. They're fixed now in CVS. This is fixed for 3.6.2, but not for 3.6.0 nor 3.6.1. TIA Dominique -- Live Security

[Fink-users] Infinite loop while configuring kst-1.7.0-1004

2012-07-24 Thread Dominique Dhumieres
Updating kst-1.7.0-1004 on intel 10.6.8 fails with an infinite loop while configuring: ... make[1]: Leaving directory `/sw64/src/fink.build/kst-1.7.0-1004/kst-1.7.0' /bin/sh ./config.status --recheck running CONFIG_SHELL=/bin/sh /bin/sh ./configure --prefix=/sw64 --mandir=/sw64/share/man

Re: [Fink-users] Infinite loop while configuring kst-1.7.0-1004

2012-07-25 Thread Dominique Dhumieres
I get the same loop with ppc 10.5, the time stamp is make: Warning: File `Makefile.am' has modification time 1.8e+19 s in the future Dominique -- Live Security Virtual Conference Exclusive live event will cover all the

Re: [Fink-users] Infinite loop while configuring kst-1.7.0-1004

2012-07-25 Thread Dominique Dhumieres
Do you have coreutils-default installed? I have coreutils installed, but not coreutils-default. ... Do you have fink's make package installed? I had it. Removing it did not fixed the problem. Dominique -- Live

Re: [Fink-users] Failed: phase compiling: imlib-1.9.15-1027 failed

2012-07-31 Thread Dominique Dhumieres
I'd recommend renaming /usr/X11/bin/xmkmf to get cleaner X11 setup, since any Fink packages that need xmkmf use fink's xmkmf package. It worked, thanks for the tip. Dominique -- Live Security Virtual Conference

[Fink-users] Failed: phase compiling: fits-oct360-1.0.2-1 failed

2012-07-31 Thread Dominique Dhumieres
Updating to fits-oct360-1.0.2-1 failed on Package manager version: 0.34.1 Distribution version: selfupdate-rsync Tue Jul 31 21:36:08 2012, 10.5, powerpc Trees: local/main stable/main stable/crypto unstable/main unstable/crypto Xcode.app: 3.1.4 Xcode command-line tools: 3.1.4 fits-oct360-1.0.2-1

[Fink-users] Can't resolve dependency liboctave343-gcc47-dev for package fits-oct343-1.0.2-1

2012-07-31 Thread Dominique Dhumieres
Updating to fits-oct343-1.0.2-1 on both ppc 10.5 and intel 10.6 failed with Can't resolve dependency liboctave343-gcc47-dev for package fits-oct343-1.0.2-1 (no matching packages/versions found) Exiting with failure. TIA Dominique

[Fink-users] Failed: phase compiling: libopensync1-shlibs-0.39-3 failed

2012-08-19 Thread Dominique Dhumieres
Updating to libopensync1-shlibs-0.39-3 failed on Package manager version: 0.34.2 Distribution version: selfupdate-rsync Sun Aug 19 15:30:12 2012, 10.6, x86_64 Trees: local/main stable/main stable/crypto unstable/main unstable/crypto Xcode.app: 3.2.6 Xcode command-line tools: 3.2.6 Max. Fink build

Re: [Fink-users] Failed: phase compiling: libopensync1-shlibs-0.39-3 failed

2012-08-19 Thread Dominique Dhumieres
Try running sudo chown -R fink-bld /sw/var/ccache and then see if the opensync build works. It worked (BTW it was sudo chown -R fink-bld /sw64/var/ccache for me;-) Thanks for the quick fix. Dominique -- Live Security

[Fink-users] Problems with mechanics-oct*

2012-08-25 Thread Dominique Dhumieres
On ppc 10.5, updating to mechanics-oct343-1.3.0-2 seems to ignore the atlas variants: fink needs help picking an alternative to satisfy a virtual dependency. The candidates: (1) octave343-dev: MATLAB-like language for computations (2) octave343-x11-dev: MATLAB-like language for

Re: [Fink-users] Problems with mechanics-oct*

2012-08-26 Thread Dominique Dhumieres
Try revision 3. On x86_64 I now get Can't resolve dependency linear-algebra-oct360 ( = 2.0.0 ) | linear-algebra-ref-360 | linear-algebra-atlas-oct360 general-oct360 ( = 1.2.2 ) for package mechanics-oct360-1.3.0-3 (no matching packages/versions found) Exiting with failure. missing parentheses?

[Fink-users] Failed: phase patching: secs1d-oct3??-0.0.9-2 failed

2012-09-06 Thread Dominique Dhumieres
Hi Alex, Updating to secs1d-oct3??-0.0.9-2 failed with Unpacking fink-buildlock-secs1d-oct305-0.0.9-2 (from .../fink-buildlock-secs1d-oct305-0.0.9-2_2012.09.06-19.52.55_darwin-x86_64.deb) ... Setting up fink-buildlock-secs1d-oct305-0.0.9-2 (2012.09.06-19.52.55) ... /sw64/bin/tar

Re: [Fink-users] Failed: phase patching: secs1d-oct3??-0.0.9-2 failed

2012-09-06 Thread Dominique Dhumieres
Thanks. It's fixed now in CVS. Confirmed, thanks, Dominique -- Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can

[Fink-users] Failed: phase compiling: optim-atlas-oct324-1.2.1-1 failed

2012-09-18 Thread Dominique Dhumieres
Updating to optim-atlas-oct324-1.2.1-1 on Package manager version: 0.34.3 Distribution version: selfupdate-rsync Tue Sep 18 18:39:18 2012, 10.5, powerpc Trees: local/main stable/main stable/crypto unstable/main unstable/crypto Xcode.app: 3.1.4 Xcode command-line tools: 3.1.4

[Fink-users] Failed: phase compiling: svn-swig-pm588-1.7.7-1 failed

2012-10-25 Thread Dominique Dhumieres
Updating to svn-swig-pm588-1.7.7-1 on Package manager version: 0.34.4 Distribution version: selfupdate-rsync Thu Oct 25 19:36:03 2012, 10.5, powerpc Trees: local/main stable/main stable/crypto unstable/main unstable/crypto Xcode.app: 3.1.4 Xcode command-line tools: 3.1.4 Max. Fink build jobs: 1

Re: [Fink-users] Failed: phase compiling: svn-swig-pm588-1.7.7-1 failed

2012-10-25 Thread Dominique Dhumieres
I have updated svn-swig-pm588 by setting the default gcc compiler to 4.0.1. Apparently the configure use the default gcc compiler (4.8.0 in my case), but the build use gcc 4.0.1. I saw configure:19537: $? = 0 configure:19537: result: yes configure:19594: gcc -c -g -O2 -g -O2

[Fink-users] Failed: phase compiling: octclip-oct305-1.0.3-1 failed

2012-10-25 Thread Dominique Dhumieres
Updating to octclip-oct305-1.0.3-1 (octproj-oct305-1.1.2-1 or time-oct305-2.0.0-2) on Package manager version: 0.34.4 Distribution version: selfupdate-rsync Fri Oct 26 01:14:36 2012, 10.5, powerpc Trees: local/main stable/main stable/crypto unstable/main unstable/crypto Xcode.app: 3.1.4 Xcode

Re: [Fink-users] Failed: phase compiling: svn-swig-pm588-1.7.7-1 failed

2012-10-25 Thread Dominique Dhumieres
How did 'gcc' get to be gcc 4.8.0? Did you create a symlink to it? I put the bin dir in the PATH after the sw ones, but before the usr ones. That's likely to cause a lot of problems. A few problems, yes (as in this case), but not a lot, probably not more than having gcc 4.2 as the default (I

[Fink-users] Failed: phase compiling: image-oct360-2.0.0-1 failed

2012-12-03 Thread Dominique Dhumieres
Updating to image-oct3*-2.0.0-1 on Package manager version: 0.34.4 Distribution version: selfupdate-rsync Mon Dec 3 20:57:06 2012, 10.6, x86_64 Trees: local/main stable/main stable/crypto unstable/main unstable/crypto Xcode.app: 3.2.6 Xcode command-line tools: 3.2.6 image-oct360-2.0.0-1 is set

Re: [Fink-users] Failed: phase compiling: image-oct360-2.0.0-1 failed

2012-12-04 Thread Dominique Dhumieres
What does the config.log file say? I have been unable to find any config.log file in /sw64/src/fink.build/image-oct360-2.0.0-1. Where should I find it? TIA Dominique -- LogMeIn Rescue: Anywhere, Anytime Remote support

Re: [Fink-users] Failed: phase compiling: image-oct360-2.0.0-1 failed

2012-12-04 Thread Dominique Dhumieres
When oct-cxx --version returns i686-apple-darwin10-g++-4.2.1 (GCC) 4.2.1 (Apple Inc. build 5666) (dot 3) Copyright (C) 2007 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR

Re: [Fink-users] Failed: phase compiling: image-oct360-2.0.0-1 failed

2012-12-04 Thread Dominique Dhumieres
I'll probably have to force it to use gcc47 (until gcc48 is in Fink) I have not been successful with gcc48;-(what is the way to use gcc47?). Dominique -- LogMeIn Rescue: Anywhere, Anytime Remote support for IT. Free

[Fink-users] Failed: phase compiling: svn-swig-pm588-1.7.8-1 failed

2013-01-09 Thread Dominique Dhumieres
Updating to svn-swig-pm588-1.7.8-1 on Package manager version: 0.34.4 Distribution version: selfupdate-rsync Sat Jan 5 15:38:09 2013, 10.5, powerpc Trees: local/main stable/main stable/crypto unstable/main unstable/crypto Xcode.app: 3.1.4 Xcode command-line tools: 3.1.4 Max. Fink build jobs: 1

[Fink-users] Failed: phase compiling: gdl-0.9.3-1 failed

2013-01-18 Thread Dominique Dhumieres
Updating to gdl-0.9.3-1 failed on Package manager version: 0.34.4 Distribution version: selfupdate-rsync Fri Jan 18 14:34:27 2013, 10.5, powerpc Trees: local/main stable/main stable/crypto unstable/main unstable/crypto Xcode.app: 3.1.4 Xcode command-line tools: 3.1.4 Max. Fink build jobs: 1

[Fink-users] Failed: PatchFile /sw/fink/dists/stable/main/finkinfo/10.4-EOL/sci/gnuplot.patch checksum does not match!

2013-01-24 Thread Dominique Dhumieres
Updating to gnuplot-4.6.1-2 on Package manager version: 0.30.2 Distribution version: selfupdate-rsync Tue Jan 22 21:51:09 2013, 10.4, powerpc Trees: local/main stable/main stable/crypto unstable/main unstable/crypto Xcode Version: 2.5-1 failed with gzip -dc /sw/src/gnuplot-4.6.1.tar.gz |

[Fink-users] Can't resolve dependency x11-xlocale-fix for package vim-7.3.709-1

2013-01-24 Thread Dominique Dhumieres
Updating to vim-7.3.709-1 on Package manager version: 0.30.2 Distribution version: selfupdate-rsync Tue Jan 22 21:51:09 2013, 10.4, powerpc Trees: local/main stable/main stable/crypto unstable/main unstable/crypto Xcode Version: 2.5-1 failed with Can't resolve dependency x11-xlocale-fix for

Re: [Fink-users] Failed: PatchFile /sw/fink/dists/stable/main/finkinfo/10.4-EOL/sci/gnuplot.patch checksum does not match!

2013-01-27 Thread Dominique Dhumieres
Fixed Confirmed, Thanks, Dominique -- Master Visual Studio, SharePoint, SQL, ASP.NET, C# 2012, HTML5, CSS, MVC, Windows 8 Apps, JavaScript and much more. Keep your skills current with LearnDevNow - 3,200 step-by-step

Re: [Fink-users] Can't resolve dependency x11-xlocale-fix for package vim-7.3.709-1

2013-01-27 Thread Dominique Dhumieres
Fixed I have now updated vim successfully. Thanks, Dominique -- Master Visual Studio, SharePoint, SQL, ASP.NET, C# 2012, HTML5, CSS, MVC, Windows 8 Apps, JavaScript and much more. Keep your skills current with

Re: [Fink-users] Failed: phase compiling: libavcodec53-shlibs-0.8.12-2 failed

2013-01-27 Thread Dominique Dhumieres
I have no way of testing this on either 10.4 or powerpc. Only suggestion I was able to find online was to remove libtool14 if it is installed. If that doesn't work, I have no idea of what else to try. Thanks for the answer, but it did not help. However I knew that I have been hit by this

Re: [Fink-users] Failed: phase compiling: libavcodec53-shlibs-0.8.12-2 failed

2013-01-30 Thread Dominique Dhumieres
Ok, thus updated. Thanks. I have rebuilt libavcodec53 with gcc-4.0 without any problem. Thanks, Dominique -- Everyone hates slow websites. So do we. Make your web apps faster with AppDynamics Download AppDynamics Lite

[Fink-users] Failed: PatchFile /sw/fink/dists/stable/main/finkinfo/10.4-EOL/libs/libaprutil.0-shlibs.patch checksum does not match!

2013-01-30 Thread Dominique Dhumieres
David, Updating to libaprutil.0-shlibs-1.5.1-1 on ppc-darwin8 failed with bzip2 -dc /sw/src/apr-util-1.5.1.tar.bz2 | /sw/bin/tar -xf - --no-same-owner --no-same-permissions Removing runtime build-lock... Removing build-lock package... /sw/bin/dpkg-lockwait -r

Re: [Fink-users] Failed: PatchFile /sw/fink/dists/stable/main/finkinfo/10.4-EOL/libs/libaprutil.0-shlibs.patch checksum does not match!

2013-01-31 Thread Dominique Dhumieres
Ack, committed just now. Confirmed, thanks, Dominique -- Everyone hates slow websites. So do we. Make your web apps faster with AppDynamics Download AppDynamics Lite for free today: http://p.sf.net/sfu/appdyn_d2d_jan

[Fink-users] octave glitches

2013-02-24 Thread Dominique Dhumieres
Updating bundle-octave360-atlas fails with: Can't resolve dependency octave360-docs for package bundle-octave360-atlas-20130219-2 (no matching packages/versions found) Exiting with failure. Updating bundle-octave-atlas (3.6.4) fails with Can't resolve dependency actuarial-oct364 for package

[Fink-users] Failed: PatchFile /sw64/fink/dists/stable/main/finkinfo/sci/gmsh.patch checksum does not match!

2013-03-12 Thread Dominique Dhumieres
On intel 10.6, updating to gmsh-2.7.0-1 fails with Failed: PatchFile /sw64/fink/dists/stable/main/finkinfo/sci/gmsh.patch checksum does not match! Actual: fa117d7ee3adb9f218ce08cb3f547819 Expected: 39252d46b5c109feb22567af1f2e3cea TIA Dominique

[Fink-users] Failed: can't install package gcc48-4.8.0-1000

2013-03-25 Thread Dominique Dhumieres
Installing package gcc48-4.8.0-1000 on intel x86_64 OSX 10.6 fails with Unpacking gcc48 (from .../gcc48_4.8.0-1000_darwin-x86_64.deb) ... /sw64/bin/dpkg: error processing /sw64/fink/dists/stable/main/binary-darwin-x86_64/languages/gcc48_4.8.0-1000_darwin-x86_64.deb (--install): trying to

Re: [Fink-users] Failed: can't install package gcc48-4.8.0-1000

2013-03-25 Thread Dominique Dhumieres
Jack, Thanks for the investigation. Meanwhile a possible workaround is to remove the libffi package (while keeping libffi-shlibs). Dominique -- Everyone hates slow websites. So do we. Make your web apps faster with

[Fink-users] Failed: phase compiling: matplotlib-py25-1.2.1-1 failed

2013-04-03 Thread Dominique Dhumieres
Updating (installing) matplotlib-py25-1.2.1-1 failed on Package manager version: 0.34.7 Distribution version: selfupdate-rsync Wed Apr 3 13:49:38 2013, 10.6, x86_64 Trees: local/main stable/main stable/crypto unstable/main unstable/crypto Xcode.app: 3.2.6 Xcode command-line tools: 3.2.6 Max.

[Fink-users] Failed: phase compiling: atlas-3.10.1-1 failed

2013-04-10 Thread Dominique Dhumieres
Updating to atlas-3.10.1-1 failed on Package manager version: 0.34.7 Distribution version: selfupdate-rsync Tue Apr 9 23:13:12 2013, 10.5, powerpc Trees: local/main stable/main stable/crypto unstable/main unstable/crypto Xcode.app: 3.1.4 Xcode command-line tools: 3.1.4 atlas-3.10.1-1 is set to

Re: [Fink-users] Failed: phase compiling: atlas-3.10.1-1 failed

2013-04-10 Thread Dominique Dhumieres
Jack, You can get the complete log at http://www.lps.ens.fr/~dominiq/fink/atlas.log.bz2 Dominique -- Precog is a next-generation analytics platform capable of advanced analytics on semi-structured data. The platform

Re: [Fink-users] Failed: phase compiling: atlas-3.10.1-1 failed

2013-04-15 Thread Dominique Dhumieres
Can you post INSTALL_LOG/sMVNTUNE.LOG? I add it at the end of this mail. Apparently the relevant error is /sw/src/fink.build/atlas-3.10.1-1/darwin_bld/bin/ATLrun.sh: line 4: 63889 Segmentation fault $atldir/$* I suspect this will reveal that passing -mcpu=7400 -mtune=7400 on mflags

[Fink-users] Failed: phase installing: qrupdate-atlas-1.1.2-7 failed

2013-04-18 Thread Dominique Dhumieres
Alex, Installing qrupdate-atlas-1.1.2-7 failed on Package manager version: 0.34.7 Distribution version: selfupdate-rsync Thu Apr 18 12:35:52 2013, 10.6, x86_64 Trees: local/main stable/main stable/crypto unstable/main unstable/crypto Xcode.app: 3.2.6 Xcode command-line tools: 3.2.6 Max. Fink

[Fink-users] Failed: phase compiling: tsa-oct364-4.2.4-7 failed

2013-04-28 Thread Dominique Dhumieres
Updating to tsa-oct364-4.2.4-7 failed on Package manager version: 0.34.7 Distribution version: selfupdate-rsync Sun Apr 28 12:30:42 2013, 10.6, x86_64 Trees: local/main stable/main stable/crypto unstable/main unstable/crypto Xcode.app: 3.2.6 Xcode command-line tools: 3.2.6 tsa-oct364-4.2.4-7 is

Re: [Fink-users] Failed: phase compiling: tsa-oct364-4.2.4-7 failed

2013-04-28 Thread Dominique Dhumieres
What do you get from dpkg -l fink-octave-scripts Desired=Unknown/Install/Remove/Purge/Hold | Status=Not/Installed/Config-files/Unpacked/Failed-config/Half-installed |/ Err?=(none)/Hold/Reinst-required/X=both-problems (Status,Err: uppercase=bad) ||/ NameVersion

Re: [Fink-users] Failed: phase compiling: tsa-oct364-4.2.4-7 failed

2013-04-28 Thread Dominique Dhumieres
Could I please see the output from running fink rebuild fink-octave-scripts? sudo -u fink-bld [ENV] sh -c /tmp/fink.3_0yH unzip -o /sw64/src/fink-octave-scripts-0.2.0.zip Archive: /sw64/src/fink-octave-scripts-0.2.0.zip 704a46481fa174ca6c6a2e727f4a16c3e3eebc59 creating:

Re: [Fink-users] Failed: phase compiling: tsa-oct364-4.2.4-7 failed

2013-04-28 Thread Dominique Dhumieres
What does dpkg -L fink-octave-scripts return now? /. /sw64 /sw64/share /sw64/share/doc /sw64/share/doc/fink-octave-scripts /sw64/share/doc/fink-octave-scripts/Readme.md /sw64/share/fink-octave-scripts /sw64/share/fink-octave-scripts/genmkoctfile.sh.in

[Fink-users] Can't resolve dependency liboctave343-gcc48-dev for package

2013-04-30 Thread Dominique Dhumieres
Alex, I am almost done with octave* on intel 10.6, but for the following (i) statistics-oct305 1.1.3-4Additional statistics functions for Octave (i) statistics-oct324 1.1.3-4Additional statistics functions for Octave (i)

[Fink-users] Failed: phase compiling: hdf5.8-1.8.11-1 failed

2013-05-27 Thread Dominique Dhumieres
Updating to hdf5.8-1.8.11-1 failed on Package manager version: 0.34.8 Distribution version: selfupdate-rsync Mon May 27 14:25:19 2013, 10.5, powerpc Trees: local/main stable/main stable/crypto unstable/main unstable/crypto Xcode.app: 3.1.4 Xcode command-line tools: 3.1.4 Max. Fink build jobs: 1

Re: [Fink-users] Failed: phase compiling: hdf5.8-1.8.11-1 failed

2013-05-27 Thread Dominique Dhumieres
I think the problem is in /sw/src/fink.build/hdf5.8-1.8.11-1/hdf5-1.8.11/config/powerpc-apple # The default compiler is `clang'. # No support for OS older than darwin 10.X. if test X- = X-$CC; then case $host_os in darwin10.*) # Snow Leopard. Use gcc/g++ because clang++ is not

[Fink-users] Failed: phase compiling: xemacs-21.4.22-2 failed

2013-05-28 Thread Dominique Dhumieres
Updating to xemacs-21.4.22-2 failed on Package manager version: 0.34.8 Distribution version: selfupdate-rsync Tue May 28 12:13:08 2013, 10.5, powerpc Trees: local/main stable/main stable/crypto unstable/main unstable/crypto Xcode.app: 3.1.4 Xcode command-line tools: 3.1.4 Max. Fink build jobs: 1

[Fink-users] Octave glitches

2013-05-28 Thread Dominique Dhumieres
On Core2Duo OSX 10.6.8, I see the following glitches: Can't resolve dependency liboctave343-gcc48-dev for package io-oct343-1.2.2-1 (no matching packages/versions found) and Failed: Illegal version specification '= 4.0.2-2) (-atlas = -atlas) atlas-shlibs (= 3.10.1-1' for package

[Fink-users] Failed: phase compiling: gcc48-4.8.1-1000 failed

2013-05-31 Thread Dominique Dhumieres
Jack, Updating to gcc48-4.8.1-1000 failed on Package manager version: 0.34.8 Distribution version: selfupdate-rsync Fri May 31 17:04:22 2013, 10.5, powerpc Trees: local/main stable/main stable/crypto unstable/main unstable/crypto Xcode.app: 3.1.4 Xcode command-line tools: 3.1.4 Max. Fink build

Re: [Fink-users] Failed: phase compiling: gcc48-4.8.1-1000 failed

2013-06-01 Thread Dominique Dhumieres
Jack, Before entering how the different gcc are installed on my system, let me say that the following change allowed me to update gcc48 [karma] /Users/dominiq% diff /sw/var/lib/fink/path-prefix-g++-4.0/g++~ /sw/var/lib/fink/path-prefix-g++-4.0/g++ 5c5 exec g++-4.0 $@ --- exec g++-4.2 $@ So

[Fink-users] Wrong signature for control-atlas-oct36*

2013-07-30 Thread Dominique Dhumieres
Updating control-atlas-oct36* to 2.4.3-1 fails at download with The checksum of the file is incorrect. The most likely cause for this is a corrupted or incomplete download Expected: e5baef56938883062f185077f2050db6 Actual: MD5(149d5d0be0e6af3b589417ba3a675e52)

Re: [Fink-users] Wrong signature for control-atlas-oct36*

2013-07-31 Thread Dominique Dhumieres
It's now fixed in CVS. Confirmed, thanks, Dominique -- Get your SQL database under version control now! Version control is standard for application code, but databases havent caught up. So what steps can you take to

[Fink-users] bundle-octave3(05|24|43) exit with failures

2013-07-31 Thread Dominique Dhumieres
Alex, Last octave glitches on intel 10.6: [macbook] f90/bug% sudo acoc fink install bundle-octave305-atlas Can't resolve dependency imagemagick7-dev for package image-oct305-1.0.8-23 (no matching packages/versions found) Exiting with failure. [macbook] f90/bug% sudo acoc fink install

[Fink-users] The checksum of the file netcdf-1.0.1.tar.gz ... is incorrect. ...

2013-09-09 Thread Dominique Dhumieres
Alex, Updating to netcdf-1.0.1 fails at download with ... The checksum of the file is incorrect. The most likely cause for this is a corrupted or incomplete download Expected: baf557065bb28203e39537f7c600bcd9 Actual: MD5(18506d23276dabb544c7d11dcd9f9d16)

Re: [Fink-users] The checksum of the file netcdf-1.0.1.tar.gz ... is incorrect. ...

2013-09-09 Thread Dominique Dhumieres
Thanks. I completely forgot about the latter 3 problems; hopefully the changes I just made should address those. Alex, Thanks for the fixes. I am left with Can't resolve dependency liboctave343-gcc48-dev for package netcdf-oct343-1.0.1-1 (no matching packages/versions found) Exiting with

[Fink-users] Failed: phase installing: llvm-gcc42-2336.11-107 failed

2013-10-11 Thread Dominique Dhumieres
Installing llvm-gcc42-2336.11-107 on Package manager version: 0.35.2 Distribution version: selfupdate-rsync Fri Oct 11 08:07:49 2013, 10.8, x86_64 Trees: local/main stable/main Xcode.app: 5.0 Xcode command-line tools: 5.0.0.0.1.1377666378 llvm-gcc42-2336.11-107 is set to build with only one job.

Re: [Fink-users] Failed: phase installing: llvm-gcc42-2336.11-107 failed

2013-10-11 Thread Dominique Dhumieres
Hi Jack, I have found the problem: 'sw' is hardcoded in /sw64/fink/10.7/stable/main/finkinfo/languages/llvm-gcc42-10.8.info as tar -cpf - sw | (cd %d ; tar xpf -) So the build works if fink directory is 'sw', but not otherwise. In my case, the install succeeds if I replace 'sw' with 'sw64'.

[Fink-users] Failed: phase compiling: arpack-ng-mpi-atlas-3.1.3-3 failed

2013-11-04 Thread Dominique Dhumieres
Installing arpack-ng-mpi-atlas-3.1.3-3 on Package manager version: 0.36.0 Distribution version: selfupdate-rsync Mon Nov 4 07:53:13 2013, 10.9, x86_64 Trees: local/main stable/main Xcode.app: 5.0.1 Xcode command-line tools: 5.0.1.0.1.1382131676 Max. Fink build jobs: 8 failed with configure:

Re: [Fink-users] Failed: phase compiling: arpack-ng-mpi-atlas-3.1.3-3 failed

2013-11-05 Thread Dominique Dhumieres
I just checked 3.1.3-4 into CVS. I haven't quite built up the dependencies yet on 10.9 to test it myself, but the pkgconfig logic works in arpack-ng-mpi (I didn't need any extra depedencies to build that). Let me know how it works. Thanks for the fix, but now the build fails with ...

[Fink-users] Failed: phase compiling: cln6-1.3.3-1 failed

2013-11-05 Thread Dominique Dhumieres
Installing cln6-1.3.3-1 on Package manager version: 0.36.0 Distribution version: selfupdate-rsync Tue Nov 5 09:23:30 2013, 10.9, x86_64 Trees: local/main stable/main Xcode.app: 5.0.1 Xcode command-line tools: 5.0.1.0.1.1382131676 Max. Fink build jobs: 8 failed with ... Making all in src

Re: [Fink-users] Failed: phase compiling: arpack-ng-mpi-atlas-3.1.3-3 failed

2013-11-05 Thread Dominique Dhumieres
Try using a single build job ... How can I do that? Dominique -- November Webinars for C, C++, Fortran Developers Accelerate application performance with scalable programming models. Explore techniques for threading,

Re: [Fink-users] Failed: phase compiling: cln6-1.3.3-1 failed

2013-11-05 Thread Dominique Dhumieres
Could you retry with only one build job? ... Making all in src /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../autoconf -I../include -I../src -I../include -I../src -I/sw64/include -g -O2 -MT cl_alloca.lo -MD -MP -MF .deps/cl_alloca.Tpo -c -o cl_alloca.lo `test -f

Re: [Fink-users] Failed: phase compiling: arpack-ng-mpi-atlas-3.1.3-3 failed

2013-11-05 Thread Dominique Dhumieres
Alex, I have found the problem: 'sw' is hardcoded in libs=`PKG_CONFIG_PATH=/sw/lib/openmpi/pkgconfig pkg-config --libs ompi-f77 | cut -d\ -f2- ` If I replace 'sw' with 'sw64', everything works fine. Dominique

[Fink-users] Failed: phase compiling: octave-atlas-3.6.4-5 failed

2013-11-05 Thread Dominique Dhumieres
Building octave-atlas-3.6.4-5 on Package manager version: 0.36.0 Distribution version: selfupdate-rsync Tue Nov 5 19:17:20 2013, 10.9, x86_64 Trees: local/main stable/main Xcode.app: 5.0.1 Xcode command-line tools: 5.0.1.0.1.1382131676 Max. Fink build jobs: 1 failed with ... libtool: compile:

Re: [Fink-users] Failed: phase compiling: octave-atlas-3.6.4-5 failed

2013-11-05 Thread Dominique Dhumieres
With SetCC: flag-sort -r gcc-fsf-4.8 SetCXX: flag-sort -r g++-fsf-4.8 the build fails with ... libtool: link: flag-sort -r g++-fsf-4.8 -o DLD-FUNCTIONS/.libs/__magick_read__.so -bundle DLD-FUNCTIONS/.libs/DLD_FUNCTIONS___magick_read___la-__magick_read__.o -L/sw64/lib

[Fink-users] Failed: phase compiling: ginac2-1.6.1-2 failed

2013-11-10 Thread Dominique Dhumieres
Installing ginac2-1.6.1-2 fails on Package manager version: 0.36.0 Distribution version: selfupdate-rsync Sun Nov 10 13:41:46 2013, 10.9, x86_64 Trees: local/main stable/main Xcode.app: 5.0.1 Xcode command-line tools: 5.0.1.0.1.1382131676 Max. Fink build jobs: 1 with /bin/sh ../libtool

[Fink-users] Failed: phase compiling: symband-oct364-1.0.10-6 failed

2013-11-10 Thread Dominique Dhumieres
Alex, I have tried to indtall the octave packages on Package manager version: 0.36.0 Distribution version: selfupdate-rsync Sun Nov 10 13:41:46 2013, 10.9, x86_64 Trees: local/main stable/main Xcode.app: 5.0.1 Xcode command-line tools: 5.0.1.0.1.1382131676 symband-oct364-1.0.10-6 is set to build

Re: [Fink-users] Failed: phase compiling: symband-oct364-1.0.10-6 failed

2013-11-10 Thread Dominique Dhumieres
Try editing /sw/bin/mkoctfile-3.6.4 as a superuser and change all of the instances of oct-cc to /sw/var/lib/fink/path-prefix-clang/cc and those of oct-cxx to /sw/var/lib/fink/path-prefix-clang/c++ . Thanks for the tip. I had to edit /sw64/bin/mkoctfile also and

Re: [Fink-users] Failed: phase compiling: ginac2-1.6.1-2 failed

2013-11-11 Thread Dominique Dhumieres
David, Could you (or anyone) please test it for me on xcode 5? I have applied the patch and run 'sudo make' in the directory and its parent without error. However I don't know how to do the packaging (what I can do is expand the compressed tar, apply the patch, and compress the tar). Is there

Re: [Fink-users] Failed: phase compiling: ginac2-1.6.1-2 failed

2013-11-11 Thread Dominique Dhumieres
(what I can do is expand the compressed tar, apply the patch, and compress the tar). And I updated the md5 value and the package installed without further problem. Thanks for the patch, Dominique -- November

Re: [Fink-users] Failed: phase compiling: ginac2-1.6.1-2 failed

2013-11-11 Thread Dominique Dhumieres
... I have committed an update on the 10.7 tree that: ... It works fine, thanks, Dominique -- November Webinars for C, C++, Fortran Developers Accelerate application performance with scalable programming models.

[Fink-users] Failed: phase compiling: vtk510-5.10.1-1 failed

2013-11-18 Thread Dominique Dhumieres
Installing vtk510-5.10.1-1 on Package manager version: 0.36.1 Distribution version: selfupdate-cvs Mon Nov 18 21:07:34 2013, 10.9, x86_64 Trees: local/main stable/main Xcode.app: 5.0.2 Xcode command-line tools: 5.0.1.0.1.1382131676 Max. Fink build jobs: 1 failed with ... Linking C shared

[Fink-users] Failed: phase compiling: dicom-oct364-0.1.1-6 failed

2013-12-08 Thread Dominique Dhumieres
Updating to dicom-oct364-0.1.1-6 on Package manager version: 0.36.1 Distribution version: selfupdate-cvs Sun Dec 8 16:07:15 2013, 10.9, x86_64 Trees: local/main stable/main Xcode.app: 5.0.2 Xcode command-line tools: 5.0.1.0.1.1382131676 dicom-oct364-0.1.1-6 is set to build with only one job.

[Fink-users] Failed: phase compiling: parallel-oct364-2.0.5-6 failed

2013-12-13 Thread Dominique Dhumieres
Installing parallel-oct364-2.0.5-6 on Package manager version: 0.36.1 Distribution version: selfupdate-rsync Fri Dec 13 20:51:32 2013, 10.9, x86_64 Trees: local/main stable/main Xcode.app: 5.0.2 Xcode command-line tools: 5.0.1.0.1.1382131676 parallel-oct364-2.0.5-6 is set to build with only one

Re: [Fink-users] Failed: phase compiling: parallel-oct364-2.0.5-6 failed

2013-12-15 Thread Dominique Dhumieres
Now added to the distribution. This has still not propagated to me!-( Dominique -- Rapidly troubleshoot problems before they affect your business. Most IT organizations don't have a clear picture of how application

[Fink-users] Failed: phase installing: llvm34-3.4-0e failed

2014-02-15 Thread Dominique Dhumieres
Hi David, Updating to llvm34-3.4-0e failed on Package manager version: 0.36.3.1 Distribution version: selfupdate-rsync Sat Feb 15 11:31:35 2014, 10.9, x86_64 Trees: local/main stable/main Xcode.app: 5.0.2 Xcode command-line tools: 5.0.1.0.1.1382131676 Max. Fink build jobs: 8 when using

Re: [Fink-users] Failed: phase installing: llvm34-3.4-0e failed

2014-02-16 Thread Dominique Dhumieres
Hi David, Looks like it died at the start of InstallScript. How odd. Can you bzip me a full log of the build so I can see if any earlier commands failed? (and compare against my 10.7 log) Unfortunately I did not keep my log (I had to reboot following a system freeze). And as I said I found

[Fink-users] Failed: phase compiling: cantor4-mac-4.13.1-2 failed

2014-06-20 Thread Dominique Dhumieres
Compiling: cantor4-mac-4.13.1-2 failed on Package manager version: 0.37.0 Distribution version: selfupdate-rsync Fri Jun 20 12:11:49 2014, 10.9, x86_64 Trees: local/main stable/main Xcode.app: 5.1.1 Xcode command-line tools: 5.1.0.0.1.1396320587 Max. Fink build jobs: 8 with ... -- Found

Re: [Fink-users] Failed: phase compiling: cantor4-mac-4.13.1-2 failed

2014-06-21 Thread Dominique Dhumieres
A quick thing to try is add the following to the very beginning of CompileScript ... Thanks for the answer, this allows cantor4 to build, but I now get CMake Error: Attempt to add a custom rule to output

[Fink-users] Failed: phase compiling: h5py-py34-2.3.0-2 failed

2014-06-23 Thread Dominique Dhumieres
Updating to h5py-py34-2.3.0-2 failed on Package manager version: 0.37.0 Distribution version: selfupdate-rsync Mon Jun 23 11:05:53 2014, 10.9, x86_64 Trees: local/main stable/main Xcode.app: 5.1.1 Xcode command-line tools: 5.1.0.0.1.1396320587 Max. Fink build jobs: 8 with gcc

Re: [Fink-users] Failed: phase compiling: cantor4-mac-4.13.1-2 failed

2014-06-23 Thread Dominique Dhumieres
This is fixed after a selfupdate. ... It is, but building kdebase4 still fails with the custom rule problem. I can point to the macro that it's occurring in, Yes, please. I may have to rebuild the relevant package(s). Thanks for your help, Dominique

[Fink-users] Failed: phase compiling: inkscape-0.48.4-14 failed

2014-07-09 Thread Dominique Dhumieres
Updating to inkscape-0.48.4-14 failed on Package manager version: 0.37.0 Distribution version: selfupdate-rsync Wed Jul 9 18:19:28 2014, 10.9, x86_64 Trees: local/main stable/main Xcode.app: 5.1.1 Xcode command-line tools: 5.1.0.0.1.1396320587 Max. Fink build jobs: 8 with ... g++

[Fink-users] Failed: phase compiling: nepomuk-core-mac-4.14.0-1 failed

2014-09-01 Thread Dominique Dhumieres
Installing nepomuk-core-mac-4.14.0-1 on Package manager version: 0.37.0 Distribution version: selfupdate-rsync Mon Sep 1 16:06:58 2014, 10.9, x86_64 Trees: local/main stable/main Xcode.app: 5.1.1 Xcode command-line tools: 5.1.0.0.1.1396320587 Max. Fink build jobs: 8 failed with ... CMake

Re: [Fink-users] Failed: phase compiling: nepomuk-core-mac-4.14.0-1 failed

2014-09-02 Thread Dominique Dhumieres
Should be fixed with revision -2. Thanks, but now I get [Book15] /Users/dominiq% sudo fink update nepomuk-core-mac Information about 9712 packages read in 2 seconds. The following package will be installed or updated: nepomuk-core-mac The following 15 additional packages will be installed:

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