-boun...@nmr.mgh.harvard.edu
[freesurfer-boun...@nmr.mgh.harvard.edu] on behalf of Douglas N Greve
[gr...@nmr.mgh.harvard.edu]
Sent: Thursday, September 11, 2014 1:55 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] Monte Carlo Sim output / sig.masked.mgh
I think it must have gotten
, September 11, 2014 1:55 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] Monte Carlo Sim output / sig.masked.mgh
I think it must have gotten contaminated as an attachement. Try using
this one
ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mri_glmfit-sim
On 09/10
...@nmr.mgh.harvard.edu]
Sent: Wednesday, September 10, 2014 4:10 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] Monte Carlo Sim output / sig.masked.mgh
Not sure what is wrong. Is it executable? Were you able to save the file
from your email or did you cut and paste it into a file and save
: Thursday, September 11, 2014 1:55 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] Monte Carlo Sim output / sig.masked.mgh
I think it must have gotten contaminated as an attachement. Try using
this one
ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mri_glmfit-sim
] on behalf of Douglas N Greve
[gr...@nmr.mgh.harvard.edu]
Sent: Tuesday, September 09, 2014 6:14 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] Monte Carlo Sim output / sig.masked.mgh
Yes, you can just run
/path/to/your/local/copy/mri_glmfit-sim
On 09/09/2014 05:49 PM, Eryilmaz
09, 2014 6:14 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] Monte Carlo Sim output / sig.masked.mgh
Yes, you can just run
/path/to/your/local/copy/mri_glmfit-sim
On 09/09/2014 05:49 PM, Eryilmaz, Huseyin Hamdi wrote:
Hi Doug,
I don't seem to have the permission
...@nmr.mgh.harvard.edu] on behalf of Douglas N Greve
[gr...@nmr.mgh.harvard.edu]
Sent: Wednesday, September 10, 2014 4:10 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] Monte Carlo Sim output / sig.masked.mgh
Not sure what is wrong. Is it executable? Were you able to save the file
-boun...@nmr.mgh.harvard.edu
[freesurfer-boun...@nmr.mgh.harvard.edu] on behalf of Douglas N Greve
[gr...@nmr.mgh.harvard.edu]
Sent: Monday, September 08, 2014 11:48 AM
To: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] Monte Carlo Sim output / sig.masked.mgh
That was an oversight. I've
:48 AM
To: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] Monte Carlo Sim output / sig.masked.mgh
That was an oversight. I've attached a version that should work. Can you
test it for me? Once I know it works I'll check it in to tree.
doug
On 09/03/2014 12:30 PM, Eryilmaz, Huseyin
Subject: Re: [Freesurfer] Monte Carlo Sim output / sig.masked.mgh
You can just copy it over the old one (but make a backup of it first)
On 09/09/2014 04:21 PM, Eryilmaz, Huseyin Hamdi wrote:
Hi Doug,
Thanks for your reply. I can certainly test it. Could you tell me how I can
run this new
] on behalf of Douglas N Greve
[gr...@nmr.mgh.harvard.edu]
Sent: Tuesday, September 09, 2014 5:24 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] Monte Carlo Sim output / sig.masked.mgh
You can just copy it over the old one (but make a backup of it first)
On 09/09/2014 04:21 PM
That was an oversight. I've attached a version that should work. Can you
test it for me? Once I know it works I'll check it in to tree.
doug
On 09/03/2014 12:30 PM, Eryilmaz, Huseyin Hamdi wrote:
Dear FS experts,
I have a question about a MC output file. When I run the MC sim
(using
Dear FS experts,
I have a question about a MC output file. When I run the MC sim (using
mri_glmfit-sim) on the surface, it generates a bunch of files including a
'sig.masked.mgh', which is nice for displaying the significance map limited to
the clusters that survive the MC correction. However,
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