urfer-boun...@nmr.mgh.harvard.edu] on behalf of Matt Glasser
>[m...@ma-tea.com]
>Sent: Wednesday, March 23, 2016 9:29 PM
>To: Freesurfer support list
>Subject: Re: [Freesurfer] Surface based analysis using FA maps
>
>FA or fractional anisotropy explains the fraction
...@nmr.mgh.harvard.edu
[freesurfer-boun...@nmr.mgh.harvard.edu] on behalf of Matt Glasser
[m...@ma-tea.com]
Sent: Wednesday, March 23, 2016 9:29 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Surface based analysis using FA maps
FA or fractional anisotropy explains the fraction of the diffusion
arch 23, 2016 8:49 PM
>To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
>Subject: Re: [Freesurfer] Surface based analysis using FA maps
>
>Right but what do you think FA, MD, AD, RD, etc are telling you
>neurobiologically in the grey matter?
>
>Matt.
>
>On 3/23/16
urfer-boun...@nmr.mgh.harvard.edu] On Behalf Of Matt Glasser
Sent: Wednesday, March 23, 2016 8:49 PM
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] Surface based analysis using FA maps
Right but what do you think FA, MD, AD, RD, etc are telling you
n
fer-boun...@nmr.mgh.harvard.edu] On Behalf Of Matt Glasser
>Sent: Wednesday, March 23, 2016 8:04 PM
>To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
>Subject: Re: [Freesurfer] Surface based analysis using FA maps
>
>I too am puzzled as to why you would want to
23, 2016 8:04 PM
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] Surface based analysis using FA maps
I too am puzzled as to why you would want to do this. In terms of getting
improvement in the alignment across subjects TBSS is one way to ap
I too am puzzled as to why you would want to do this. In terms of getting
improvement in the alignment across subjects TBSS is one way to approach
this. Another would be to use the fiber orientations in the registration
like these folks have done:
I don't know of a reference where someone has done this (though I would
be surprised if it is not out there), so just be aware of this if you
try to publish. The commands look correct, however, you may or may not
want to sample in the middle of the cortical ribbon (--projfrac 0.5).
Since this
