[Freesurfer] ERROR: niiRead(): error opening file

External Email - Use Caution Hello FreeSurfer Developers, Thank you for your work ! I am trying to segment .nii images with FS, using an ubuntu shell in Windows 10. When I run the command "recon-all" I receive the Error message that the file "exists but is not readable". So I

[Freesurfer] Help segmenting all subjects in a folder

External Email - Use Caution Hello FreeSurfer Developers, Thank you for your work ! I successfully set up Freesurfer and ran a test on my computer, and I am now attempting to run recon-all on all subjects in a folder ("/home/users/s/saccaro/Groupe_0" in the example script

Re: [Freesurfer] Recon-all error

External Email - Use Caution Hello, please ignore my message below: the problem was in the name of the folder "Group 0". Please do excuse me for bothering you, best, GT > Il 24/05/2021 17:57 g.ton...@libero.it ha scritto: > > > Hello FreeSurfer Developers, > >

[Freesurfer] Recon-all error

External Email - Use Caution Hello FreeSurfer Developers, Thank you for your work ! I am new to Freesurfer and I apologize if my question is naive but I cannot find a solution in any of the online resources. I successfully set up Freesurfer and I am now attempting to run