Re: [FRIAM] Real-world genetic algorithm example... help!

2010-07-10 Thread Ted Carmichael
Ha! I knew someone would complain about that. First of all, Eric is correct: the main point of the story - beyond a nice, illustrative example of how a GA works - is the need to properly define a fitness function. In the case of individual chickens, the fitness function was ill-defined and

Re: [FRIAM] Need system-oriented Java-OO developers, modeling/sim environment, part-full time, work-at-home

2010-07-10 Thread Ted Carmichael
Wow ... it is a small world sometimes. We started talking about Genetic Algorithms on a different thread. So of course I was thinking about Dr. Michalewicz, who taught a class in GA that I took a few years ago, and (literally) wrote the book on the subject. And then the very next thread I read

Re: [FRIAM] Real-world genetic algorithm example... help!

2010-07-10 Thread Russ Abbott
It's not a good example as an illustration of GA because (1) the selection mechanism to move from one generation to the next is essentially select the best and shake it up. At best you might call that elitism plus mutation. But it is not representative of GA. (2) it has no explicit representation

Re: [FRIAM] Real-world genetic algorithm example... help!

2010-07-10 Thread John Kennison
Selecting for productive coops rather than productive hens might reject highly productive, highly aggressive hens in favor of somewhat less productive, considerably less aggressive hens who would leave their coop-mates in peace (and therefore able to produce more eggs). Such hens need not have

Re: [FRIAM] Real-world genetic algorithm example... help!

2010-07-10 Thread Ted Carmichael
Well, in regards to (1), yes, I would guess elitism + mutation is a good description. However, I believe that is enough to qualify as a GA. As I recall, some GA practitioners believe mutation is best, some believe crossover is best, and some feel you should have both, or decide based on the

Re: [FRIAM] Projects: 5 Stages

2010-07-10 Thread qef
Tory -- It was mostly that the stages seem to be empirically valid - I can recall many instances where I've been in a team or relationship that had the excitement and novelty of coming together, the inevitable misunderstandings/arguments about how to proceed, a reconciliation and synthesis

Re: [FRIAM] Real-world genetic algorithm example... help!

2010-07-10 Thread Nicholas Thompson
Everybody, Why do the best conversations happen when I am totally unable to pay proper attention to them!? Somebody help me out here. A genetic algorithm is a PROCEDURE, right? So you run the procedure on a computer. Is it possible to implement that same procedure on crates of chickens.

Re: [FRIAM] Real-world genetic algorithm example... help!

2010-07-10 Thread Nicholas Thompson
John, Thanks. I agree. In fact, I would argue that ANY attempt to squeeze spiritual juice from this particular example blunts it scientific edge. To mix a metaphor. N Nicholas S. Thompson Emeritus Professor of Psychology and Ethology, Clark University (nthomp...@clarku.edu)

Re: [FRIAM] Real-world genetic algorithm example... help!

2010-07-10 Thread Nicholas Thompson
I have been here before. This is the point in the conversation where Roger Critchlow explains to me what the hell is going or or, i die. Roger? Is there a confusion here concerning what is the analogue of the individual in the genetic algorithm? Nick Nicholas S. Thompson Emeritus

[FRIAM] Virtual-world genetic algorithm example... help!

2010-07-10 Thread John Kennison
I am reminded of two conflicting reports I got from two friends about an attempt to evolve a sorting program. One friend reported that it was discouraging. The evolved programs never were reliable and they took all kinds of time and had many superfluous features. The only way to actually get

Re: [FRIAM] Virtual-world genetic algorithm example... help!

2010-07-10 Thread Russ Abbott
I've had both experiences. The successful version had a couple of advantages. It had more useful primitives and a more useful fitness function. I don't remember the details, but a primitive that says swap adjacent cells if one is less that the other helps a lot! A fitness function that counts the

Re: [FRIAM] Virtual-world genetic algorithm example... help!

2010-07-10 Thread John Kennison
Thanks Russ. depending on the primitives chosen, this could be more in line with the pessimistic account. Putting in the swapping primitive seems like aiming for the simple sort which keeps on swapping until it can't be done anymore. Do you know of any evolutionary process which produced a

Re: [FRIAM] Real-world genetic algorithm example... help!

2010-07-10 Thread sarbajit roy
How is selective breeding / clustering to optimise particular traits in chickens any different from endogamous human clusters / societies? In India for eg. the endgamous caste and sub-caste systems have been in place for millenia to ensure genetic optimisation and perpetuation of a few desirable

Re: [FRIAM] Real-world genetic algorithm example... help!

2010-07-10 Thread Nicholas Thompson
Perhaps if I understood the computer side of this conversation better I wouldn't have the feeling that the chicken example is being misunderstood. But I dont and I do (respectively). It should be remembered that no chickens were selected during the conduct of this experiment; only crates.

Re: [FRIAM] Virtual-world genetic algorithm example... help!

2010-07-10 Thread Marcus Daniels
Russ Abbott wrote: In a system like this though, you always have to start with some primitives. It's really matter of where you can get from the primitives and whether there is a steadily uphill (in terms of fitness) path for getting there. That's a question of how diversity is maintained in

Re: [FRIAM] Real-world genetic algorithm example... help!

2010-07-10 Thread Russ Abbott
Exactly. Although this was not (as far as I know) part of the experiment, one could imagine a similar experiment on groups with more structure, e.g., baseball teams. It's the team that wins the most games (or the most important games) that reproduces. That team probably has pretty good players

[FRIAM] Hywel White et al re 2010 and 1995 neutrino mass findings at Los Alamos Neutrino Detector: Rich Murray 2010.07.10

2010-07-10 Thread Rich Murray
Hywel White et al re 2010 and1995 neutrino mass findings at Los Alamos Neutrino Detector: Rich Murray 2010.07.10 I have been privileged for over 2 years to warmly appreciate many explorers with sophisticated views at Friday Morning Group. As a layman in all areas, I notice that science