Re: [galaxy-dev] latest galaxy-central version

2013-11-06 Thread Robert Baertsch
Carl, Thanks for building a great tool. Can you fix the library performance problem? Steps to reproduce: 1. http://su2c-dev.ucsc.edu/library 2. open library TCGA Pancan. It takes more than 20 seconds! -Robert On Nov 5, 2013, at 1:29 PM, Carl Eberhard wrote: > Thanks for the thorough report,

Re: [galaxy-dev] latest galaxy-central version

2013-11-05 Thread Martin Čech
Hi Robert, We are currently working on improving data libraries including the speed enhancements. In the meantime one of our users also reported that he is using for the dataset folders multiple libraries - each having less folder-depth which for him improves performance significantly. Maybe it wi

Re: [galaxy-dev] latest galaxy-central version

2013-11-05 Thread Carl Eberhard
Hello, Robert I'm having difficulty reproducing this with a fresh install of galaxy_central:default:11226:c67b9518c1e0. Is this an intermittent error or does it happen reliably each time with the steps above? Is it still the same javascript error you mentioned above? I'll investigate further.

Re: [galaxy-dev] latest galaxy-central version

2013-11-04 Thread Robert Baertsch
I updated to the stable release and reproduced the issue. Step to reproduce 1. go to admin 2. Manage data libraries 3. add dataset 4. select Upload files from filesystem paths 5. paste full path to any bam file. 6. leave defaults: auto-detect and copy files into galaxy 7. select role to restrict a

Re: [galaxy-dev] latest galaxy-central version

2013-11-04 Thread Martin Čech
Hello, I have also seen some of these errors while developing libraries. The library code is not in central however it might be related to recent changes to the history panel. Carl Eberhard might now more, adding him to the conversation. --Marten On Mon, Nov 4, 2013 at 2:45 PM, Robert Baertsch

Re: [galaxy-dev] latest galaxy-central version

2013-11-04 Thread Robert Baertsch
It keeps doing posts, and I'm not seeing any new errors. POST http://su2c-dev.ucsc.edu:8383/library_common/library_item_updates 200 OK 121ms When I did a browser refresh, I got the following javascript error: (I am logged in) Galaxy.currUser is undefined on Line 631 in history-panel.js W