Re: [galaxy-dev] Tool Shed test framework breaking where run_functional_tests.sh works

2013-07-29 Thread Peter Cock
Hi Dave, Did a Trello card get filled for this problem of failing tests on the Tool Shed? Thanks, Peter On Tue, Jun 11, 2013 at 9:04 AM, Björn Grüning bjo...@gruenings.eu wrote: Hi, I also have that error in the latest toolshed: AssertionError: Attempting to set field 'topology' to value

Re: [galaxy-dev] Tool Shed test framework breaking where run_functional_tests.sh works

2013-07-29 Thread Peter Cock
On Mon, Jul 29, 2013 at 2:49 PM, Peter Cock p.j.a.c...@googlemail.com wrote: Hi Dave, Did a Trello card get filled for this problem of failing tests on the Tool Shed? Thanks, Peter For anyone following this issue, on another thread Dave just replied: Peter, The issue with seq_rename

Re: [galaxy-dev] Tool Shed test framework breaking where run_functional_tests.sh works

2013-06-11 Thread Björn Grüning
Hi, I also have that error in the latest toolshed: AssertionError: Attempting to set field 'topology' to value '['-c']' in form 'tool_form' threw exception: multiple matches to value/label c in list control control: SelectControl(topology=[-c, -l]) If the above control is a DataToolparameter

Re: [galaxy-dev] Tool Shed test framework breaking where run_functional_tests.sh works

2013-05-16 Thread Peter Cock
On Thu, May 9, 2013 at 6:59 PM, Dave Bouvier d...@bx.psu.edu wrote: Peter, As of my latest commit, the automated test results should now match that of run_functional_tests.sh. --Dave B. Hi Dave, This problem seems to have returned since then (unless this time instead of missing test

Re: [galaxy-dev] Tool Shed test framework breaking where run_functional_tests.sh works

2013-05-16 Thread Dave Bouvier
Peter, That test output does look wrong, but wrong in a way that suggests a new issue has been uncovered. I'll work on tracking it down as soon as I can. --Dave B. On 5/16/13 11:05:56.000, Peter Cock wrote: On Thu, May 9, 2013 at 6:59 PM, Dave Bouvier d...@bx.psu.edu

Re: [galaxy-dev] Tool Shed test framework breaking where run_functional_tests.sh works

2013-05-10 Thread Peter Cock
On Thu, May 9, 2013 at 6:59 PM, Dave Bouvier d...@bx.psu.edu wrote: Peter, As of my latest commit, the automated test results should now match that of run_functional_tests.sh. --Dave B. Thanks Dave, Presumably once the Test Tool Shed is updated, all the old tests will be re-run, and so

Re: [galaxy-dev] Tool Shed test framework breaking where run_functional_tests.sh works

2013-05-10 Thread Dave Bouvier
That is correct, the tests are run nightly, some time after midnight eastern US time, unless I manually initiate the testing process. --Dave B. On 5/10/13 05:36:41.000, Peter Cock wrote: On Thu, May 9, 2013 at 6:59 PM, Dave Bouvier d...@bx.psu.edu wrote: Peter, As of my latest commit,

Re: [galaxy-dev] Tool Shed test framework breaking where run_functional_tests.sh works

2013-05-10 Thread Greg Von Kuster
Is there a more optimal time to initiate this testing process to better accommodate those in other time zones? If anyone is waiting for the nightly test results, we should tweak cron so no waiting is necessary (if possible). On May 10, 2013, at 8:53 AM, Dave Bouvier wrote: That is correct,

Re: [galaxy-dev] Tool Shed test framework breaking where run_functional_tests.sh works

2013-05-10 Thread Ross
Buildbot can be triggered here http://buildbot.g2.bx.psu.edu/builders/central-py2.7-linux-x86_64-postgres manually I think. On Fri, May 10, 2013 at 10:56 PM, Greg Von Kuster g...@bx.psu.edu wrote: Is there a more optimal time to initiate this testing process to better accommodate those in

Re: [galaxy-dev] Tool Shed test framework breaking where run_functional_tests.sh works

2013-05-09 Thread Peter Cock
On Thu, May 9, 2013 at 10:59 AM, Peter Cock p.j.a.c...@googlemail.com wrote: On Thu, May 9, 2013 at 10:49 AM, Peter Cock p.j.a.c...@googlemail.com wrote: Hi Dave, As you hoped, these test now shows up on the tool page (as expected they are test failures - apparently my install script

Re: [galaxy-dev] Tool Shed test framework breaking where run_functional_tests.sh works

2013-05-09 Thread Dave Bouvier
Peter, I have duplicated this discrepancy in my local environment, and will be looking into the cause. I hope to have it resolved in short order. --Dave B. On 5/9/13 06:06:16.000, Peter Cock wrote: On Thu, May 9, 2013 at 10:59 AM, Peter Cock p.j.a.c...@googlemail.com wrote: On Thu, May

Re: [galaxy-dev] Tool Shed test framework breaking where run_functional_tests.sh works

2013-05-09 Thread Dave Bouvier
Peter, As of my latest commit, the automated test results should now match that of run_functional_tests.sh. --Dave B. On 5/9/13 06:06:16.000, Peter Cock wrote: On Thu, May 9, 2013 at 10:59 AM, Peter Cock p.j.a.c...@googlemail.com wrote: On Thu, May 9, 2013 at 10:49 AM, Peter Cock