Hi All,
I have some tools that generate some tabular output. The next step is to
aggregate the data for some filtering and analysis. In my view the best way to
do by using a DB (MySQL in my case).
Tools and cmd line wrappers can easily connect to this DB (another database
than galaxy is using
I'd be happy to review the scan results, feel free to send them to me. I'll
share it with the rest of the team as well.
Thanks!
-Dannon
On Mar 19, 2011, at 11:37 AM, Paul, Rohit (NIH/NCI) [C] wrote:
> We recently ran a Nessus vulnerability scan against our server that hosts a
> local instal
Dear colleagues,
I have a local installed Galaxy. When I try to run bowtie to align a
small FASTQ file, I got the following message and the result was
empty.
"""
empty, format: sam, database: Project-Id-Version: PACKAGE VERSION
Report-Msgid-Bugs-To: POT-Creation-Date: 2008-09-21 18:33+0900
PO-Rev
We recently ran a Nessus vulnerability scan against our server that hosts a
local installation of Galaxy. The scan report showed that the web application
is vulnerable to XSS and HTML injection attacks. In order to determine if/when
these vulnerabilities will be fixed, where should I either send
Thanks for an answer and for moving it to the proper mailing list.
There were a few issues with postgres 9 that were fixed in changeset 5074,
> what revision is your galaxy instance running?
I am still running the stable version (galaxy-dist branch). I guess that
with this version I need to stic
Martin,
There were a few issues with postgres 9 that were fixed in changeset 5074, what
revision is your galaxy instance running? If you are running something newer
than that, could you explain more explicitly the steps to reproduce the server
error?
Also, I've moved the thread to galaxy-dev