. It may
also just be used for its adapter trimming feature without doing any
paired end overlap.
Cheers,
Lionel
Lionel Guy
Uppsala University
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also like to see a seqprep wrapper…
if you need something sooner, cutdadapt is already wrapped and i'm pretty
sure there is an existing tool to merge reads as well.
Brad
--
Brad Langhorst
Applications and Product Development Scientist
On Oct 14, 2013, at 6:59 AM, Lionel Guy guy.lio
/
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tool_dependencies.xml
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Lionel Guy
Petterslundsgatan 24B, SE-75328 Uppsala
email: guy.lio...@gmail.com, mobile: +46 (0)73 9760618, phone: +46 (0)18 410
7398
the unified search at:
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tool_dependencies.xml
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Lionel Guy
Petterslundsgatan 24B, SE-75328 Uppsala
email: guy.lio...@gmail.com, mobile: +46 (0)73 9760618, phone: +46 (0)18 410
7398
Hi Galaxians,
I've been scratching a bit my head about how galaxy builds dependency,
fruitlessly so far... Here is my problem: I have a local tool (not
installed through a toolshed) that makes use of another tool (aragorn)
that I installed from the toolshed.
Aragorn requires the aragorn
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Lionel Guy
Petterslundsgatan 24B, SE-75328 Uppsala
email: guy.lio...@gmail.com, mobile: +46 (0)73 9760618, phone: +46 (0)18 410
7398
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Bjoern and others,
I'm back at that. I published my tool on the toolshed
(http://toolshed.g2.bx.psu.edu/view/lionelguy/prokka). I created a new,
fresh instance of galaxy from scratch, with a new database. I went on
and installed prokka from the toolshed. Prokka has a lot of
dependencies,
Good morning Galaxy,
It appears that the test tool shed is down, returning a 502 Bad Gateway
message. The main tool shed is fine.
I'm not sure that this is the right place to announce that, but since I don't
know who is in charge of the servers, I give it a shot...
Cheers,
Lionel
Hi Galaxy-devs,
When adding files to a data library (as admin), I have to choose the
genome corresponding to my dataset, but the drop-down list is not
sorted, making it a tad annoying to scroll. In addition, by default, the
homIni20 genome is selected, which seems a bit anthropocentric ;)
I
Hi!
I'm trying to upload multiple files a data library on my local instance
of Galaxy. I've looked at the tutorial on the Galaxy wiki
(http://wiki.galaxyproject.org/Admin/DataLibraries/UploadingLibraryFiles),
where it's said that there are four options to upload files, available
by clicking
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