Hi,
On Jul 27, 2011, at 3:34 PM, Peter Cock wrote:
On Wed, Jul 27, 2011 at 2:28 PM, Greg Von Kuster g...@bx.psu.edu wrote:
Helo Jelle,
I've taken a look at your patches and the code looks good.
However, I'm wondering why you find it necessary to upload image files to
Galaxy. Do tools exist
Hi Jeroen,
You can use web services thanks to the work from Sumedha Ganjoo et al. from the
University of Georgia. You can find that on the community site:
Tools Shed - Data Source - Suite of Web service addition tools.
Hi Leandro,
On Apr 27, 2011, at 6:08 PM, Leandro Hermida wrote:
Hi Pieter,
cut
I have this *exact* same setup as you where I am authenticating with the LDAP
user ID and returning a mail LDAP attribute as REMOTE_USER, but this sets the
Galaxy user email address (which in Galaxy is the
gnuplot from the Terminal first, then typing
set term xterm, and then exiting, but this didn't change the error. Could
you please explain how you set the environment in the galaxy/run.sh script?
Again, I appreciate the help.
Jeff
On Apr 23, 2011, at 8:11 AM, Pieter Neerincx wrote
Hi Leandro,
On Apr 27, 2011, at 3:50 PM, Leandro Hermida wrote:
Hi,
Just wondering if I got my setup right, I have Galaxy front-ended by Apache
doing the static caching, proxying and LDAP auth. What's nice is that user's
don't have to be created by an admin if the user authenticates and
definitions and joined file in
my local instance of Galaxy, but get the error.
I'll give you a break :) and keep working on it to see if I can trace the
source of the error.
Many thanks again,
Jeff
On Apr 27, 2011, at 4:10 AM, Pieter Neerincx wrote:
Hi Jeff,
1. As Florent wrote
Hi Jeff,
This is indeed a dependency issue and I have seen those both on Linux and Mac
OS X. What happens if you type gnuplot in a Terminal window yourself? If you
also get command not found. There is either still something missing or your
environment is not setup properly. If the tool works
Hi Raghu,
On Apr 21, 2011, at 4:44 AM, Raghuraman Ramamurthy wrote:
Hello,
I would first like to thank and appreciate the Galaxy team for their efforts.
I want to clone galaxy and host it in my website. In doing so, I want to
restrict the users who use galaxy on my website. So, is
Hi Alex,
Galaxy sanitizes the params to remove unsafe characters. It's a security
feature. From a previous post some time ago:
If you trust your users you can add the option name to NEVER_SANITIZE
in lib/galaxy/utils/_init_.py
You can also have a look at that *.py file and
On Feb 16, 2011, at 3:44 PM, Pieter Neerincx wrote:
Hi Alex,
Galaxy sanitizes the params to remove unsafe characters. It's a security
feature. From a previous post some time ago:
If you trust your users you can add the option name to NEVER_SANITIZE
in lib/galaxy/utils/_init_.py
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