There is also a memory leak that occurs when using the pbs job runner. I
believe the leak is somewhere in libtorque or pbs_python but I have not yet
tracked it down.
--nate
On Feb 29, 2012, at 3:28 PM, John Chilton wrote:
We had intermittent issues like this for an embarrassingly long time
We've experience memory-leak symptoms and we also use the PBS job runner
here. We did not try to locate the leak, but instead installed monit as
a work-around
http://mmonit.com/monit/
Todd Oakley
On 3/6/2012 11:10 AM, Nate Coraor wrote:
There is also a memory leak that occurs when using the
Hi all--
Our group is running a local instance of Galaxy on a Linux box. We have been
noticing a memory issue, where if we leave the server running for a few days,
soon all available memory (~8gb) will be used up to the point where the tools
fail because they are unable to allocate new
We had intermittent issues like this for an embarrassingly long time
at MSI, but since we applied this patch
https://bitbucket.org/galaxy/galaxy-central/pull-request/36/fix-for-dynamic_optionspy
Galaxy has been running smoothly for weeks. Seems unlikely this is the
problem in your case (unless you