You can use $input.name to get the name you see in the history.Unfortunately, that usually is something silly like "Samtools on data 3"I have changed all the labels for all the major file that are produced to provide more sensible names, usually based on the input...An example below is how I
Hi there,
I am new to Galaxy and I've just recently learned how to integrate a Perl
script to it. Now, my code uses the input file's name as a header for a
column in the output. When I ran it in Galaxy, I did get the filename, but
it's the one ending in .dat (actually, I got the entire path of
