Hi there,
we have a 32 core server but I realised that a lot of programs are only
using a fraction of that. I was able to adjust bowtie, bowtie2 and Tophat
to use all of the cores but couldn't find an thread/core option for Macs14,
Macs2 or PeakRanger. Does anyone know if these programs are
Hi Alexander,
There is a -t for PeakRanger to indicate the number of threads. I
don't think macs14 or macs2 can run on mutltiple cores - I am cc'ing
Tao Lui, the author of macs, who can confirm this.
Thanks,
Q
On Tue, Mar 26, 2013 at 6:15 AM, Alexander Kurze
alexander.ku...@gmail.com wrote:
Thanks a lot for your answers. I tried to set the -t value to 32 in
peakranger but nothing really happens...it still runs on 1 thread even so
it says -t 32 in the execution line I guess I need to contact the author.
Thanks for your help!
Alex
On Tue, Mar 26, 2013 at 2:01 PM, Peter Cock
