Hi Amir,
If you are interested in adding a new datasource, take a look at:
http://database.oxfordjournals.org/content/2011/bar011.full
http://wiki.g2.bx.psu.edu/Admin/Internals/Data%20Sources
If you just want to add a file from an http/ftp location, take a look at the
Upload tool, under the Get Data tool menu.
Please let us know if we can provide additional assistance.
Thanks for using Galaxy,
Dan
On Jul 14, 2011, at 1:54 PM, Amirhossein Kiani wrote:
Hey Galaxy developers!
I was wondering if anyone knows how to send data to a local galaxy instance
from another server (I'm interested in sending a BAM file to Galaxy). I see
that UCSC and others have done it but couldn't find anything about the API
doc they are using...
Looking at the request headers from UCSC, I see that this request:
tool_id:bx_browser
URL:http://main.genome-browser.bx.psu.edu/cgi-bin/hgTables
hguid:883956
db:hg18
org:Human
hgta_table:seq
hgta_track:gold
hgta_regionType:genome
hgta_outputType:primaryTable
position:chr10:90997300-90997350
hgta_doTopSubmit:get output
hgsid:62857
hgta_doGalaxyQuery:Send query to Galaxy
has been sent to:
http://main.g2.bx.psu.edu/tool_runner
Is this all needed? If so how is the URL to the data file passed to Galaxy?
Many thanks!
Amir
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