Dear John
Thank you for responding.
Not too sure why I can't see your link unfortunately, but did you mean
this?
http://dev.list.galaxyproject.org/bowtie-wrapper-td4658698.html
I've tried modifying the command but doesn't seem to work either.
And I can't use the wrapper too?
I've just updated
It looks like this was a problem for awhile but isn't anymore on main
https://trello.com/c/yFeXvhUg.
It doesn't look like there has been any changes to the bowtie2 wrapper
since it was migrated to the tool shed so I am not sure why it isn't
working for you?
As an admin can you open a successful
Dear all
Usually the alignment statistics from bowtie2 will be printed to the stderr
file, however, on the local instance, the stderr file is empty after
alignment. It still does the alignment, but the statistics are not printed
out.
This is my hg summary:
parent: 13802:f7dd0060c296