Re: [galaxy-dev] writing command tag in xml file for a C++ tool

2013-05-23 Thread Björn Grüning
Hi VJ, bedtools is not new. It is in already available through the toolshed. Here are a few relevant links: http://wiki.galaxyproject.org/Tool%20Shed http://testtoolshed.g2.bx.psu.edu/view/bgruening/bedtools_test_bag Furthermore, the bedtool maintainer offers wrappers from his main website.

[galaxy-dev] writing command tag in xml file for a C++ tool

2013-05-22 Thread vijayalakshmi
Hi all, I want to include a new tool to galaxy. The tool is written in C++. How do I write the xml file to execute a cpp program? The tool that I am trying to integrate ishttps://code.google.com/p/bedtools/ I have the class file to be executed and the command to execute it. For example,