Since there are so many surprising new details in your last mail, maybe
it would help if you could tell where you got your Python from. Is it a
regular system installation or a toolshed installed version inside
Galaxy (which may use its own env.sh to manipulate paths) ?
Best,
Wolfgang
On
Hi all,
We have Pulsar working in a synchronous fashion using RESTful services on our
local network. Now, we're trying to use Pulsar on a remote (SGE) cluster and we
will not have the ability to mount a shared file system.
What is the best way to use Galaxy to queue jobs? If Pulsar is the
I'm trying to get my instance of Galaxy working with Sun Grid Engine. The
page https://wiki.galaxyproject.org/Admin/Config/Performance/Cluster is not
100% clear on how to do this but I here's what my job_conf.xml looks like:
?xml version=1.0?
job_conf
plugins
plugin
It is a regular system installation. Just for a sanity check, I checked the
md5 hash with the same version of my local python and it is the same. Also,
as a sanity check, I ran the tests on my local machine and python got the
LD_LIBRARY_PATH variable just fine, both as a regular user and as root.
Hello all,
February https://wiki.galaxyproject.org/GalaxyUpdates/2015_02 brings lots
of Galaxy related news
https://wiki.galaxyproject.org/GalaxyUpdates/2015_02, including events
news https://wiki.galaxyproject.org/GalaxyUpdates/2015_02#Events:
-
*GCC2015: 6-8 July, Norwich UK
