[galaxy-dev] I need some advice on what type of Galaxy server to implement

2015-07-28 Thread Shane Kelly
Hi I have been tasked with getting a Galaxy server up and running for a group at work. 1. No-one can tell me how many users (concurrent or otherwise) there will be 2. Most of the analyses will be NGS. 3. Tools will be developed in-house but we will use public domain

Re: [galaxy-dev] I need some advice on what type of Galaxy server to implement

2015-07-29 Thread Shane Kelly
f de la biodiversite interim, Direction générale >des Science et de la technologie Agriculture et Agroalimentaire >Canada / Gouvernement du Canada iyad.kandal...@agr.gc.ca / Tel: >613-759-1228 / TTY: 613-773-2600 > > > > >-Original Message- >From: gala

Re: [galaxy-dev] I need some advice on what type of Galaxy server to implement

2015-07-29 Thread Shane Kelly
ect.org/Admin/Config/Performance/Cluster > > >-Original Message- >From: Shane Kelly [mailto:s...@shanek54.co.uk] >Sent: July-29-15 7:32 AM >To: Kandalaft, Iyad >Cc: galaxy-dev@lists.galaxyproject.org >Subject: Re: [galaxy-dev] I need some advice on what type of Galaxy &g

[galaxy-dev] Does anybody know if ts (a task scheduler) is supported under Galaxy.

2015-11-24 Thread Shane Kelly
Hi, I am looking for a simple task scheduler to use with Galaxy and initially picked Torque, but since my server is a single box, Torque would appear to be overkill? Can I have any input from anyone who may have used it? Thanks for any response

Re: [galaxy-dev] Does anybody know if ts (a task scheduler) is supported under Galaxy.

2015-11-25 Thread Shane Kelly
: >>> Hi Shane, >>> >>> would Slurm work for you? >>> >>> http://slurm.schedmd.com/ >>> >>> Cheers, >>> Bjoern >>> >>> Am 24.11.2015 um 13:12 schrieb Shane Kelly: >>>> Hi, >>>> I am lookin

[galaxy-dev] Error in matplotlib

2016-01-19 Thread Shane Kelly
Could anyone shed some light on this error please? (Information from the Galaxy operator here who is having trouble posting) The error is for the dependency “package_matplotlib1_2” The full error information is Name: matplotlib Version: 1.2.1 Type: Package Status: Error Error: File "/home/li