[galaxy-dev] Developing package wrappers

Hi, I am afraid that I might be overlooking something obvious but... I am trying to add a few tools to the RAD-Seq portfolio of Galaxy. For that effect I am designing a few package wrappers. My problem is to understand the best practice to develop wrappers for dependencies of external tools.

Re: [galaxy-dev] Developing package wrappers

Hi Tiago, for simple tool_dependencies you can use the new planemo depbash command from Peter: https://github.com/galaxyproject/planemo/pull/310 For more complicated once I recommend to use the TTS for the time being. You can create the initial repository install from it and change your

Re: [galaxy-dev] Developing package wrappers

On Tue, 20 Oct 2015 14:48:08 +0200 Bjoern Gruening wrote: > Hi Tiago, > > for simple tool_dependencies you can use the new planemo depbash > command from Peter: > https://github.com/galaxyproject/planemo/pull/310 Gosh, this is exactly what the doctor ordered. Thanks

Re: [galaxy-dev] Developing package wrappers

On Tue, Oct 20, 2015 at 10:01 AM, Tiago Rodrigues Antao wrote: > Hi, > > I am afraid that I might be overlooking something obvious but... > > I am trying to add a few tools to the RAD-Seq portfolio of Galaxy. For > that effect I am designing a few package wrappers. My problem is