Re: [galaxy-dev] Urgent help needed

2017-10-19 Thread Durdevic, Marija
?That's what I wanted to hear! Thanks a lot once again. Best, Marija Von: Nate Coraor <n...@bx.psu.edu> Gesendet: Donnerstag, 19. Oktober 2017 18:59 An: Durdevic, Marija Cc: galaxy-dev@lists.galaxyproject.org Betreff: Re: [galaxy-dev] Urgent help needed

Re: [galaxy-dev] Urgent help needed

2017-10-19 Thread Durdevic, Marija
t;n...@bx.psu.edu> Gesendet: Donnerstag, 19. Oktober 2017 18:36 An: Durdevic, Marija Cc: galaxy-dev@lists.galaxyproject.org Betreff: Re: [galaxy-dev] Urgent help needed Hi Marija, Wow, sorry to hear this. If the datasets themselves were removed, it's unlikely there'd be a way to get them back

Re: [galaxy-dev] Urgent help needed

2017-10-19 Thread Nate Coraor
rija > -- > *Von:* Nate Coraor <n...@bx.psu.edu> > *Gesendet:* Donnerstag, 19. Oktober 2017 18:36 > *An:* Durdevic, Marija > *Cc:* galaxy-dev@lists.galaxyproject.org > *Betreff:* Re: [galaxy-dev] Urgent help needed > > Hi Marija, > > Wow, sorry

Re: [galaxy-dev] Urgent help needed

2017-10-19 Thread XiaoTao Jiang
What a tragedy! Be careful while use rm -rf. If happens,the right way is to shut down server and recover data from the disk. 发自我的 iPhone > 在 2017年10月20日，上午12:36，Nate Coraor 写道： > > Hi Marija, > > Wow, sorry to hear this. If the datasets themselves were removed, it's >

Re: [galaxy-dev] Urgent help needed

2017-10-19 Thread Nate Coraor
Hi Marija, Wow, sorry to hear this. If the datasets themselves were removed, it's unlikely there'd be a way to get them back. Some filesystems do have undelete tools to attempt to recover data that has not yet been overwritten. If you can stop all activity on that filesystem while investigating

[galaxy-dev] Urgent help needed

2017-10-19 Thread Durdevic, Marija
Dear developers, The colleague of mine mistakenly deleted my Galaxy installation (rm -rf *). Unfortunately there is no backup of complete installation. I have backup only configuration files. Is there any chance to fetch new Galaxy instance from git and to connect it to the old database? Or

[galaxy-dev] URGENT HELP!

2015-10-29 Thread Ali Al-Shahib
Hi all I am due to give galaxy training tomorrow and the Galaxy server has gone down. Our galaxy admin is travelling and not responding and I appreciate a quick response to this issue. When I run galaxy_restart.sh I get the following error in web0.pid: migrate.versioning.repository DEBUG

Re: [galaxy-dev] URGENT HELP!

2015-10-29 Thread Dannon Baker
It looks like the Galaxy server was downgraded relative the database. Do you know how this may have happened? It also looks like this instance is probably quite a bit out of date, in any event, so I'd be hesitant to give advice recommending a major upgrade given the current state of things. I'd

Re: [galaxy-dev] URGENT HELP!

2015-10-29 Thread Ali Al-Shahib
Not to worry, I was restarting another server. Its fixed now. Thanks From: Dannon Baker [dannon.ba...@gmail.com] Sent: 29 October 2015 18:03 To: Ali Al-Shahib; galaxy-dev@lists.galaxyproject.org Subject: Re: [galaxy-dev] URGENT HELP! It looks like the Galaxy