[galaxy-dev] Galaxy-LIMS and multiple sample

Dear all, I don't have an instance of galaxy that manages sequencing requests. I would like to, but I would like to know a single thing: Is the interface friendly enough to make me define multiple sample at once in a single request? Thanks d ___

[galaxy-dev] Galaxy-LIMS and multiple sample

Dear all, I don't have an instance of galaxy that manages sequencing requests. I would like to, but I would like to know a single thing: Is the interface friendly enough to make me define multiple sample at once in a single request? Thanks d ___

[galaxy-dev] help with users and postgres

y the user names directly in the postgres database (I'm pretty sure that is possible...). Thanks d /* Davide Cittaro, PhD Cogentech - Consortium for Genomic Technologies via adamello, 16 20139 Milano Italy tel.: +39(02)574303007 e-mail: dav

[galaxy-dev] DevNewsBriefs?

There have been no DevNewsBriefs since the end of November... should I worry? :-) d /* Davide Cittaro, PhD Cogentech - Consortium for Genomic Technologies via adamello, 16 20139 Milano Italy tel.: +39(02)574303007 e-mail: davide.citt...@ifom-ieo-campus.it

Re: [galaxy-dev] help with users and postgres

xy_user" with a few sql > statements. BUT, be careful! you can do a lot of damage to the database. > Could you post the sql statement? I guess that should work in the same way! Thanks d > Regards, Hans > > > > > On 01/25/2011 02:40 PM, Davide Cittaro wrote: &

Re: [galaxy-dev] help with users and postgres

" where email = > "wrong_name@wrong_host.ch"; update galaxy_user set username = 'foo' where email = 'foo@bar' worked thanks d /* Davide Cittaro, PhD Cogentech - Consortium for Genomic Technologies via ada

[galaxy-dev] Batch download of a history

Hi all, ___ galaxy-dev mailing list galaxy-dev@lists.bx.psu.edu http://lists.bx.psu.edu/listinfo/galaxy-dev

Re: [galaxy-dev] Batch download of a history

n't have a clue on how to implement it... Thanks d On 01/feb/2011, at 16:44, Davide Cittaro wrote: > Hi all, > ___ > galaxy-dev mailing list > galaxy-dev@lists.bx.psu.edu > http://lists.

[galaxy-dev] undelete data library

Hi there, is there a way to undelete a folder within a data library? I've deleted one (with some files) by mistake :-( d /* Davide Cittaro, PhD Cogentech - Consortium for Genomic Technologies via adamello, 16 20139 Milano Italy tel.: +39(02)574303007 e-mail: davide.citt...@ifom-ieo-camp

Re: [galaxy-dev] undelete data library

o undelete it via the Undelete option in it's > own pop-up menu. > I can view the deleted items (highlighted in red), but when I click on the "action arrow" (i.e. the ones that pops available actions for this folder) I only open and close the folder itself :-( d >

Re: [galaxy-dev] undelete data library

On Feb 21, 2011, at 4:52 PM, Greg Von Kuster wrote: > What version of Galaxy are you running. I believe this issue was corrected a > while back, so can you update to the latest version? > I've pulled r ca0c4ad2bb39 this morning... d /* Davide Cittaro, PhD Cogentech -

Re: [galaxy-dev] undelete data library

On Feb 21, 2011, at 4:55 PM, Davide Cittaro wrote: > > On Feb 21, 2011, at 4:52 PM, Greg Von Kuster wrote: > >> What version of Galaxy are you running. I believe this issue was corrected >> a while back, so can you update to the latest version? >> > >

[galaxy-dev] about bx-python and bigwig

subprocess. I wanted to make it more pythonic and started reading bigwig docs. If bx already has support for an iterator similar to bx.wiggle.Reader (I need to transfer all the chromosome in another data structure) I won't read docs further :-) Thanks d /* Davide Cittaro, PhD Cogentech - Conso

Re: [galaxy-dev] about bx-python and bigwig

hence I don't know what summary_size is :-) d /* Davide Cittaro, PhD Cogentech - Consortium for Genomic Technologies via adamello, 16 20139 Milano Italy tel.: +39(02)574303007 e-mail: davide.citt...@ifom-ieo-campus.it */ ___ Please

[galaxy-dev] importing annotation with dataset

Hi, is it just me or when I try to import a dataset from a library to a history, annotation is not retained (whereas "info" is)? d /* Davide Cittaro, PhD Cogentech - Consortium for Genomic Technologies via adamello, 16 20139 Milano Italy tel.: +39(02)574303007 e-mail: davide.citt..