Hello,
I am a graduate student at GSU. I am looking for installing GALAXY on our local
server http://alla.cs.gsu.edu/~software. as a result I like my server homepage
start with the GALAXY interface, like this one:
http://rna1.engr.uconn.edu:7474/ . after that I wish to integrate some soft
Hello,
I am a graduate student at GSU. I am looking for installing GALAXY on our local
server http://alla.cs.gsu.edu/~software. as a result I like my server homepage
start with the GALAXY interface, like this one:
http://rna1.engr.uconn.edu:7474/ . after that I wish to integrate some software
Hi everybody,
I am integrating my software ViSpA inside galaxy and I have two questions:
1: the main program is a shell script (.sh) which call another shell script,
which call Java executables. should I include any interpreter inside the .xml
tag?
and what that should be?
2. how to guar
Hi everybody,
I am integrating my own tool with galaxy. the command to run is:
./main.bash threads n t > &
the input files read and reference are of type fasta.
threads, t and n are integers.
log is to prevent console outputs.
should I load these files from the page which run th
Hello everybody,
I am trying to run my tool Vispa but every time i try to i got this error
messages:
An error occurred running this job:
/home/galaxy/galaxy-dist/tools/vispa/main.bash: line 13: ./parser_v.2.sh: No
such file or directory
/home/galaxy/galaxy-dist/tools/vispa/main.bash: line 16
Hi everybody,
I am integrating a new tool which depends on several other libraries (part of
the tool). when galaxy run my tool, it can find main command but not the
deepest. where should I define the path of the libraries and command folders I
need. by teh way, all these commands and librarie
[galaxy-dev-boun...@lists.bx.psu.edu]
on behalf of Toqa Manasrah [tmanasr...@student.gsu.edu]
Sent: Friday, December 02, 2011 3:19 PM
To: galaxy-...@bx.psu.edu
Cc: galaxy-u...@lists.bx.psu.edu
Subject: [galaxy-dev] Define a path for the command files
Hi everybody,
I am integrating a new tool which
an error message instead. the error message not a real
error but rather galaxy cannot figure out which file to display?
your help is appreciated,
From: Jennifer Jackson [j...@bx.psu.edu]
Sent: Tuesday, November 08, 2011 8:22 AM
To: Toqa Manasrah
Cc
..._CNTGS_DIST0_EM20.txt
any other method to overcome such problem
I have presentation tomorrwo. hope things will work fine.
Thank you,
From: Dannon Baker [dannonba...@me.com]
Sent: Monday, December 05, 2011 2:41 PM
To: Toqa Manasrah
Subject: Re: [galaxy
