Jeremy,
I have been trying to follow the steps in filtering Cufflink out put files
you have described in one of the previous messages (
http://gmod.827538.n3.nabble.com/Re-downstream-analysis-of-cuffdiff-out-put-td2836457.html
):
I have shared histroy with you, but in summary:
File 35: when
the file is - expr
file filter save as txt file and upload back in Galaxy.
Any suggestion?
Jagat
On Tue, May 3, 2011 at 3:08 AM, shamsher jagat kanwar...@gmail.com wrote:
Jeremy,
I have been trying to follow the steps in filtering Cufflink out put files
you have described in one of the previous
I have also been getting such messages and even saying there are too
many re-bounces so your account is being disabled and I can not reactivate
using the link sent in email
On Sun, May 22, 2011 at 11:28 PM, shashi shekhar meshash...@gmail.comwrote:
-- Forwarded message --
Is there a work flow/ tutorial how to call SNP and get significant SNP
followed by their annotation.
Thanks
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Can we also fetch virus file from some sources like this?
Thanks
Kanwar
On Mon, Nov 26, 2012 at 4:25 AM, Joachim Jacob joachim.ja...@vib.be wrote:
You can use 'Get data' -- 'UCSC Main' to fetch an GTF (gene transfer
format) format of your species of interest, Human in this case. I tend to
FTP or URL
On Sat, Dec 1, 2012 at 5:37 AM, 泽 蔡 caizexi...@yahoo.com.cn wrote:
Hi all,
I'm a new guy of galaxy and bioinformatics.
I read the document of galaxy, but it's so hard to find what I need.
I already set up a locale instance of galaxy, it works fine. The problem
is I need to
I have a bacterial genome from ncbi and woulld like to extract seq from the
corresponding fasta file of bacterial genome. Since i have list of
coordinates so would not be possible to extract one by one. Is there any
interface within galxy that i can use.
Thanks
sections, same wiki)
Best,
Jen
Galaxy team
On 12/19/12 8:19 AM, shamsher jagat wrote:
I have a bacterial genome from ncbi and woulld like to extract seq from
the corresponding fasta file of bacterial genome. Since i have list of
coordinates so would not be possible to extract one by one
