Re: [galaxy-dev] Recommended method to pull from ToolShed ?

2011-06-09 Thread Greg Von Kuster
In addition to cloning, you can also download the tarball for each tool just like you used to - see the Repository Options popup menu for each repo. On Jun 9, 2011, at 2:55 PM, Peter Cock wrote: > On Thu, Jun 9, 2011 at 7:15 PM, Assaf Gordon wrote: >> Hi, >> >> with the new ToolShed inplace,

Re: [galaxy-dev] Recommended method to pull from ToolShed ?

2011-06-09 Thread Peter Cock
On Thu, Jun 9, 2011 at 7:15 PM, Assaf Gordon wrote: > Hi, > > with the new ToolShed inplace, and support for cloning/pulling tools > directly: What's the recommend way to organize the repositories ? > > For example, I want to use Peter's Venn tool: > hg clone http://toolshed.g2.bx.psu.edu/repos/pe

[galaxy-dev] Recommended method to pull from ToolShed ?

2011-06-09 Thread Assaf Gordon
Hi, with the new ToolShed inplace, and support for cloning/pulling tools directly: What's the recommend way to organize the repositories ? For example, I want to use Peter's Venn tool: hg clone http://toolshed.g2.bx.psu.edu/repos/peterjc/venn_list If I clone, I get the following folder hierarchy