Re: [galaxy-dev] Wrapping web-tools

2012-11-07 Thread Peter Cock
On Tue, Nov 6, 2012 at 11:34 PM, Franco Caramia wrote: > Yes, primer3 is available as a command line tool, it was just an example, > the one I'm actually after is optimus primer.. > I'm sure there are several web-tools out there that would be nice to get to > Galaxy... > Any Ideas?? Galaxy does h

Re: [galaxy-dev] Wrapping web-tools

2012-11-07 Thread Joachim Jacob
Would require some adjustment on the server side of the webtool I think: to allow getting data in from URLs and to export the results to a URL (API). On the wiki, you can find this info on how to get data IN into Galaxy: http://wiki.galaxyproject.org/Admin/Internals/Data%20Sources But there i

Re: [galaxy-dev] Wrapping web-tools

2012-11-06 Thread Franco Caramia
Yes, primer3 is available as a command line tool, it was just an example, the one I'm actually after is optimus primer.. I'm sure there are several web-tools out there that would be nice to get to Galaxy... Any Ideas?? Regards, Franco On 5/11/12 11:18 PM, "Peter Cock" wrote: > On Mon, Nov

Re: [galaxy-dev] Wrapping web-tools

2012-11-05 Thread Peter Cock
On Mon, Nov 5, 2012 at 5:53 AM, Franco Caramia wrote: > Hi list, > > I’m trying to find documentation or examples on how to wrap web-tools > (like primer3, optimus primer) in Galaxy. > > Any useful links or examples would be of great help. > > Thanks, > > Franco I'm not answering your question, b

[galaxy-dev] Wrapping web-tools

2012-11-04 Thread Franco Caramia
Hi list, I¹m trying to find documentation or examples on how to wrap web-tools (like primer3, optimus primer) in Galaxy. Any useful links or examples would be of great help. Thanks, Franco This email (including any attachments or links) may contain confidential and/or legally privileged infor