Re: [galaxy-dev] approximate line numbers shown in history items can be very imprecise

2011-08-02 Thread Jelle Scholtalbers
Hi Chaolin, Although I haven't tested this, the following changes should probably work. In the datatypes_conf.xml change on this line: the max_optional_metadata_filesize to the desired size or remove tag like so: Furthermore in the file lib/galaxy/datatypes/data.py at function set_peek() s

Re: [galaxy-dev] approximate line numbers shown in history items can be very imprecise

2011-08-01 Thread Chaolin Zhang
Hi Anyone knows how to turn off the line number estimation and get the exact count for each dataset? Thanks! Chaolin On Jul 31, 2011, at 11:38 AM, Dannon Baker wrote: > Chaolin, > > You guessed correctly as to why we implemented this, getting exact line > counts on very large files is a time

Re: [galaxy-dev] approximate line numbers shown in history items can be very imprecise

2011-07-31 Thread Chaolin Zhang
Hi Dannon, We do have a local mirror here. How to disable the estimation? Thanks! Chaolin On Jul 31, 2011, at 11:38 AM, Dannon Baker wrote: > Chaolin, > > You guessed correctly as to why we implemented this, getting exact line > counts on very large files is a time consuming process. You

Re: [galaxy-dev] approximate line numbers shown in history items can be very imprecise

2011-07-31 Thread Chaolin Zhang
Hi Dannon, Thanks for the information. Yes, I know the line number tool, but running this for each file a user is interested in getting a line number is a pain (and confusing because the history items double), because in our case (probably not rare for real analysis tasks), this information is

Re: [galaxy-dev] approximate line numbers shown in history items can be very imprecise

2011-07-31 Thread Dannon Baker
Chaolin, You guessed correctly as to why we implemented this, getting exact line counts on very large files is a time consuming process. You can still get an exact line count using the Line/Word/Character count tool in the Text Manipulation section. If you're interested in the way it curren

[galaxy-dev] approximate line numbers shown in history items can be very imprecise

2011-07-31 Thread Chaolin Zhang
Hi, I noticed that the current version of galaxy shows approximate number of lines for history items, when it is relatively big. I guess this is due to a consideration of performance, but it is quite annoying, because the exact line numbers provide a very easy way for users to get simple stati