Re: [galaxy-dev] cluster_files_directory not getting cleaned
Hello - Thanks much for the response. I do not find an entry in my universe_wsgi.ini file for cleanup_jobs - should I have one? Ann On 3/28/12 9:45 AM, "Emil Bouvier" wrote: >Ann, > >Could you give me the value of the cleanup_jobs configuration entry in >universe_wsgi.ini? > >Thank you, >Dave B. > >On 3/21/12 4:35 PM, Ann Black wrote: >> Hello - >> >> I have noticed on our local install, that the job scripts as well as >> stdout/err in our cluster_files_directory is not getting cleaned up. >> When I track the jobs in our runner logs, for a sampling of the job >> scripts left over in the cluster_files_directory, the jobs are >> completing out successfully and there are no errors in the log. I have >> not tried to check if all scripts are not getting cleaned, or just some >> but by the volume of them it looks like all of them may not be getting >> removed/cleaned up after the job completes out. >> >> Any thoughts on what may be going on? >> >> Thanks, >> >> Ann >> >> >> ___ >> Please keep all replies on the list by using "reply all" >> in your mail client. To manage your subscriptions to this >> and other Galaxy lists, please use the interface at: >> >>http://lists.bx.psu.edu/ ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
Re: [galaxy-dev] cluster_files_directory not getting cleaned
Ann, Could you give me the value of the cleanup_jobs configuration entry in universe_wsgi.ini? Thank you, Dave B. On 3/21/12 4:35 PM, Ann Black wrote: Hello - I have noticed on our local install, that the job scripts as well as stdout/err in our cluster_files_directory is not getting cleaned up. When I track the jobs in our runner logs, for a sampling of the job scripts left over in the cluster_files_directory, the jobs are completing out successfully and there are no errors in the log. I have not tried to check if all scripts are not getting cleaned, or just some … but by the volume of them it looks like all of them may not be getting removed/cleaned up after the job completes out. Any thoughts on what may be going on? Thanks, Ann ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
[galaxy-dev] cluster_files_directory not getting cleaned
Hello - I have noticed on our local install, that the job scripts as well as stdout/err in our cluster_files_directory is not getting cleaned up. When I track the jobs in our runner logs, for a sampling of the job scripts left over in the cluster_files_directory, the jobs are completing out successfully and there are no errors in the log. I have not tried to check if all scripts are not getting cleaned, or just some but by the volume of them it looks like all of them may not be getting removed/cleaned up after the job completes out. Any thoughts on what may be going on? Thanks, Ann ___ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
