Re: [galaxy-dev] error installing dependency for tool shed repository.

2013-08-21 Thread Dave Bouvier
Curt, I'm happy to hear that everything is now working. If you encounter any further issues, please don't hesitate to contact us. --Dave B. On 2013-08-21 21:31, Curt Palm wrote: Hi Dave, I made changes giving the suggestions of Ross, I got a different error and that gave me insight as to w

Re: [galaxy-dev] error installing dependency for tool shed repository.

2013-08-21 Thread Ross
For the record, I'd noticed that the change of working directory following a download_by_url disappears if you include any other action tags before you run setup.py Reordering fixes this so arguably it's not really a bug although it took me some time and headscratching to realise that was the prob

Re: [galaxy-dev] error installing dependency for tool shed repository.

2013-08-21 Thread Curt Palm
Hi Dave, I made changes giving the suggestions of Ross, I got a different error and that gave me insight as to what was going on. I uploaded new xml: http://pypi.python.org/packages/source/r/requests/re quests-1.2.3.tar.gz $INSTALL_DIR

Re: [galaxy-dev] error installing dependency for tool shed repository.

2013-08-21 Thread Dave Bouvier
Curt, I tried installing the ingtest repository on a local instance of Galaxy, and the requests python module installed without errors. Which revision of Galaxy are you trying to install this repository into, and what kind of environment are you running on that system? --Dave B. On 2013-08

[galaxy-dev] error installing dependency for tool shed repository.

2013-08-21 Thread Curt Palm
I've just created a repository in the sandbox and have been trying to test the installation of a dependency my tool needs. The tool needs the python module "requests" and I've written code. I get an error: STDERR python: can't open file 'setup.py': [Errno 2] No such file or directory I've mo