32 AM
To: Hakeem Almabrazi
Cc: galaxy-dev@lists.bx.psu.edu
Subject: Re: [galaxy-dev] install reference genome Bwa and Bowtie!
Hi Hakeem,
The set up for samtools looks correct. If the problems that you had with
BWA/Bowtie were due to an error in our wiki, please send in the
suggested changes to me. We w
m Almabrazi
Cc: galaxy-dev@lists.bx.psu.edu
Subject: Re: [galaxy-dev] install reference genome Bwa and Bowtie!
Hi Hakeem,
The set up for samtools looks correct. If the problems that you had with
BWA/Bowtie were due to an error in our wiki, please send in the
suggested changes to me. We want this
there anything else I need to change at
this point.
Regards,
-Original Message-
From: Jennifer Jackson [mailto:j...@bx.psu.edu]
Sent: Thursday, January 31, 2013 6:45 PM
To: Hakeem Almabrazi
Cc: galaxy-dev@lists.bx.psu.edu
Subject: Re: [galaxy-dev] install reference genome Bwa and Bowti
ifer Jackson [mailto:j...@bx.psu.edu]
Sent: Thursday, January 31, 2013 6:45 PM
To: Hakeem Almabrazi
Cc: galaxy-dev@lists.bx.psu.edu
Subject: Re: [galaxy-dev] install reference genome Bwa and Bowtie!
Hello Hakeem,
It is difficult to troubleshoot without knowing all the exact details of
your config
Hello Hakeem,
It is difficult to troubleshoot without knowing all the exact details of
your configuration, but it sounds as if you are on the right path and
the last few bits should be easy to reconcile with our documentation.
In particular, check that the builds.txt file contains the genomes
Hi,
I just installed Galaxy in local Centos Vm. I did my best to get everything
working ( I think). I followed the instructions in this Wiki
(http://wiki.galaxyproject.org/Admin/NGS%20Local%20Setup) to install reference
genomes for the tools Bwa and Bowtie. Here is what I did in details:
1.