[galaxy-dev] nglims, remove Cycles or autofill
Hi, I would like to autofill cycles for next-gen sequencing. Most of our submitters probably don't even know what that means actually and so we want to simplify it. Same goes with paired end reads. How would I fill out the nglims yaml file so that they could skip over that section? Or maybe just hit next an extra time? Anything to simplify it. Thank you (and especially Brad)! -- Lee Katz, Ph.D. ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
Re: [galaxy-dev] nglims, remove Cycles or autofill
Lee; Hi, I would like to autofill cycles for next-gen sequencing. Most of our submitters probably don't even know what that means actually and so we want to simplify it. Same goes with paired end reads. How would I fill out the nglims yaml file so that they could skip over that section? Or maybe just hit next an extra time? Anything to simplify it. Thank you (and especially Brad)! It should be doing exactly what you describe for cycles and method. It will pre-fill the pull down box with the first option when specified as a list of choices: https://bitbucket.org/chapmanb/galaxy-central/src/395ade9a9bda518c63daa0208b476c5093ea3454/tool-data/nglims.yaml?at=default#cl-137 If you add `freetext: true` like: https://bitbucket.org/chapmanb/galaxy-central/src/395ade9a9bda518c63daa0208b476c5093ea3454/tool-data/nglims.yaml?at=default#cl-69 it will no longer do this since you can also type in other options. It sounds like what you need for this case is to restrict the options and default to the most common case you want to support. In this case the researcher doesn't have to change anything and is checking that the default options match their expectations before hitting next. Hope this helps, Brad ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
