Re: [galaxy-dev] setting metadata externally failed for HistoryDatasetAssociation

2016-06-06 Thread Anthony Underwood
Thanks Peter and John - this was exactly the issue- problem solved. Not very intuitive but an easy fix :) On 3 June 2016 at 23:13:34, Peter Cock (p.j.a.c...@googlemail.com) wrote: Hi Anthony, The line numbers for binary.py don't match the current latest sour

[galaxy-dev] Auto-registration and database session issue

2016-06-06 Thread Durdevic, Marija
Dear all, I am using LDAP authentication and auto registration options. LDAP authentication passed successfully, but I got error message during auto-registration process: File "/home/galaxy/galaxy/.venv/local/lib/python2.7/site-packages/sqlalchemy/engine/default.py", line 450, in do_execu

Re: [galaxy-dev] Error installing cummeRbund tool

2016-06-06 Thread Raymond Wan
Dear all, Sorry to bring this up again, but I've been so far unable to solve this problem. After trying to install various combination of things and looking further away from the Exception messages, I guess I have located the cause of the problem. It seems at least two dependencies no longer exi