Re: [galaxy-dev] How to get the encoded ID from the HistoryDatasetAssociation?

2016-06-08 Thread Malcolm Tobias 

Thanks Martin!  With your hint and the example from graphviz.mako I was able to 
get this to 
work.

Cheers,
Malcolm

On Wednesday, June 08, 2016 03:23:31 PM Martin Čech wrote:


Hello Malcolm, 


encoded_id is a database row id that has been ran through this method 
(https://github.com/galaxyproject/galaxy/blob/dev/lib/galaxy/web/security/__init__.py#L46[1])
 
using the 'secret' from galaxy.ini config.


You should be able to do something like this in the mako: 


${trans.security.encode_id( hda.id[2] )}




thank you for using Galaxy


Martin


On Wed, Jun 8, 2016 at 11:16 AM Malcolm Tobias  wrote:



hda.name[4] and hda.id[2] I can see various properties of thedataset, but not 
the encoded ID.

Any suggestions on how to do this?

Thanks in advance.

Malcolm

--Malcolm Tobias314.362.1594


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-- 
Malcolm Tobias
314.362.1594




[1] 
https://github.com/galaxyproject/galaxy/blob/dev/lib/galaxy/web/security/__init__.py#L46
[2] http://hda.id
[3] mailto:mtob...@wustl.edu
[4] http://hda.name
[5] https://lists.galaxyproject.org/
[6] http://galaxyproject.org/search/mailinglists/
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Re: [galaxy-dev] How to get the encoded ID from the HistoryDatasetAssociation?

2016-06-08 Thread Martin Čech 
Hello Malcolm,

encoded_id is a database row id that has been ran through this method (
https://github.com/galaxyproject/galaxy/blob/dev/lib/galaxy/web/security/__init__.py#L46)
using the 'secret' from galaxy.ini config.

You should be able to do something like this in the mako:

${trans.security.encode_id( hda.id )}

thank you for using Galaxy

Martin


On Wed, Jun 8, 2016 at 11:16 AM Malcolm Tobias  wrote:

>
> I'm really close to having a way to visualize radiological images in
> Galaxy,
> but need help in getting past the final hurdle.
>
> In the mako file, I can see how to pass parameters to the javascript that
> does
> the visualization.  It's expecting a URL to the dataset, like:
>
> params["images"] = ["/datasets/78176dfc865c8302/display/"];
>
> From what I can gather 78176dfc865c8302 is the encoded ID for the dataset.
> From variables like hda.name and hda.id I can see various properties of
> the
> dataset, but not the encoded ID.
>
> Any suggestions on how to do this?
>
> Thanks in advance.
>
> Malcolm
>
> --
> Malcolm Tobias
> 314.362.1594
>
>
> ___
> Please keep all replies on the list by using "reply all"
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[galaxy-dev] How to get the encoded ID from the HistoryDatasetAssociation?

2016-06-08 Thread Malcolm Tobias 

I'm really close to having a way to visualize radiological images in Galaxy, 
but need help in getting past the final hurdle.

In the mako file, I can see how to pass parameters to the javascript that does 
the visualization.  It's expecting a URL to the dataset, like:

params["images"] = ["/datasets/78176dfc865c8302/display/"]; 

From what I can gather 78176dfc865c8302 is the encoded ID for the dataset.  
From variables like hda.name and hda.id I can see various properties of the 
dataset, but not the encoded ID.

Any suggestions on how to do this?  

Thanks in advance.

Malcolm

-- 
Malcolm Tobias
314.362.1594


___
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