Hi Davids,
For some a somewhat more complex example, have a look at the GenomeSpace
importer tools under tools/genomespace in the distribution. They always create
at least 1 dataset, but can create any number of files, of any type of
datatype. In this tool, it will use the filetype declared by GenomeSpace, or it
will fall back to using Galaxy’s sniffing functions of it doesn’t know the
datatypes.
This makes use of the ‘galaxy.json’ file —>
json_params['job_config']['TOOL_PROVIDED_JOB_METADATA_FILE']
Thanks,
Dan
On Apr 8, 2015, at 9:24 AM, John Chilton wrote:
> I had my own use case for this a few weeks ago and I couldn't figure
> out anyway to configure this right now - I was hoping Dan might
> respond to your question with some crazy trick though. For now I have
> created a Trello card for the implementation of this feature - please
> vote for it:
>
> https://trello.com/c/FZ67pAAE
>
> -John
>
>
> On Wed, Apr 1, 2015 at 7:29 PM, David Kelly wrote:
>> Hello,
>>
>> I've looked through the documentation about tools that produce multiple
>> output files, but it seems like you're required to know the data types ahead
>> of time (or make assumptions based on input data). But what about a case
>> where you don't know what the output datatypes will be? Is it just possible
>> to have N output files imported and sniffed?
>>
>> Thanks,
>> Davids
>>
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