t Köln, HRB 73844
Von: Peter Cock
Gesendet: Mittwoch, 11. Juli 2018 16:42
An: Matthias Enders
Cc: Björn Grüning ;
galaxy-dev@lists.galaxyproject.org; f.kai...@npz.de
Betreff: Re: [galaxy-dev] Expose Command Line in Galaxy
You may have found a new Galaxy bug then :(
Could you log an issue here:
You may have found a new Galaxy bug then :(
Could you log an issue here:
https://github.com/galaxyproject/galaxy/issues
(From what you've said, I don't think that this is a problem in the
BLAST+ wrappers themselves)
Peter
On Wed, Jul 11, 2018 at 3:20 PM, Matthias Enders <
m.end...@german-seed-
z Köln
Amtsgericht Köln, HRB 73844
Von: Peter Cock
Gesendet: Mittwoch, 11. Juli 2018 16:12
An: Matthias Enders
Cc: Björn Grüning ;
galaxy-dev@lists.galaxyproject.org; f.kai...@npz.de
Betreff: Re: [galaxy-dev] Expose Command Line in Galaxy
Good. So is everything resolved now?
Peter
On Wed, Jul 11
Good. So is everything resolved now?
Peter
On Wed, Jul 11, 2018 at 3:08 PM, Matthias Enders <
m.end...@german-seed-alliance.de> wrote:
> Dear Peter,
>
>
>
> yes we did reload the Blast *.loc files using the admin interface. Our
> Version is 18.05 (based on the Galaxy – Docker image).
>
>
>
> Mit
Is there anything in the Admin's interface to let you reload the BLAST
*.loc files?
If yes, did you try it but it didn't work?
What version of Galaxy do you have?
Peter
On Tue, Jul 10, 2018 at 3:11 PM, Matthias Enders <
m.end...@german-seed-alliance.de> wrote:
> Dear Peter,
>
>
>
> up to our g
-
Von: Peter Cock
Gesendet: Dienstag, 10. Juli 2018 13:27
An: Matthias Enders
Cc: Björn Grüning ;
galaxy-dev@lists.galaxyproject.org
Betreff: Re: [galaxy-dev] Expose Command Line in Galaxy
Priorität: Hoch
Thanks for getting back to us - this was actually my guess from the original
email
Thanks for getting back to us - this was actually my guess from the
original email - that it was not a blastn error message, but a Galaxy
message before ever calling BLAST.
My guess is you are seeing this issue, or something like it, with
having to restart Galaxy to reload the *.loc files?
https:
xy-dev@lists.galaxyproject.org
Betreff: Re: [galaxy-dev] Expose Command Line in Galaxy
There is a setting to enable showing the command line string and full paths on
disk via the "i" icon from a history entry, see
https://docs.galaxyproject.org/en/master/admin/options.html#expose-dataset-pat
t: Dienstag, 10. Juli 2018 09:15
> An: Matthias Enders ;
> galaxy-dev@lists.galaxyproject.org
> Betreff: Re: [galaxy-dev] Expose Command Line in Galaxy
> Priorität: Hoch
>
> Hi Matthias,
>
> please have a look at the attached screenshot. Given that you are an admin
> and
Hi Matthias
If for whatever reasons the "i" (view details) icon doesn't work for
you, you can use the Galaxy Report Webapp (for docker installations see:
https://github.com/bgruening/docker-galaxy-stable#Galaxy-Report-Webapp )
as an alternative.
You can find your (failed) job via "Jobs in e
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