You can download DRA files directly by FTP to Galaxy . .
Just paste the FTP address directly in the file box when using upload from
my computer
Best
Simon
On 7 November 2011 04:54, Xiangming Ding din...@ucla.edu wrote:
Hi galaxy
I am a new user of galaxy. i met a problem and didnot find
Hello Xiangmimg,
Data files can be loaded using a URL on the Get Data = Upload form.
FTP and HTTP connections are supported. This is briefly described on
that form.
If you are still having issues, there may be a problem with file
compression or the connection. Downloading locally then using
Hi Rich,
This is a good question! Maybe people have been asking about this. To
download data with a unix line command method, please try wget or curl,
for example:
unix% wget 'url_for_the_dataset'
or
unix% wget 'url_for_the_history'
To capture the url for a dataset, right click on the
I uploaded two BAM files and was working with them but when I tried to use
them again they are automatically deleted along with all the steps
of analysis?
Any reason or I am missing something.
Shamsher
___
The Galaxy User list should be used
On Nov 7, 2011, at 7:11 PM, shamsher jagat wrote:
I uploaded two BAM files and was working with them but when I tried to use
them again they are automatically deleted along with all the steps of
analysis?
Any reason or I am missing something.
Hi Shamsher,
Were you logged in when you
Yes I was and infect when I logged out and logged in back it was there then
I left for lunch and when I come back data is not there? It is weird.
Shamsher
On Mon, Nov 7, 2011 at 5:00 PM, Nate Coraor n...@bx.psu.edu wrote:
On Nov 7, 2011, at 7:11 PM, shamsher jagat wrote:
I uploaded two BAM
Hi
the file name is spr097786.fastq.bz2.After upload it showed
spr097786.fastq. It showed it only contain around 5000 sequence reads.
I also tried to upload through FTP. so i download the file to my
computer and then upload to FTP in galaxy. the totlal 800M file was
uploaded to the FTP
Hi
I've started an alignment using the command line (Tophat v1.3.3). I've uploaded
the files (accepted.bam) onto Galaxy and upon doing the Cufflinks analysis on
the Galaxy interface, it shows an error. I had to look at the options. I've
change the options to default and run it again but still
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