[galaxy-user] MegaBLAST output

2012-04-23 Thread Sarah Hicks
I am having trouble finding information on the MegaBLAST output columns. What is each column for? I can't seem to figure this out by comparing info in the columns to NCBI directly because the GI#'s don't match with the correct entry on NCBI. I've seen that others have posted about that problem, so

Re: [galaxy-user] MegaBLAST output

2012-04-23 Thread Sarah Hicks
). So, thank you for asking so we that could send out a clear reply for everyone using the tool. Best, Jen Galaxy team On 4/23/12 9:56 AM, Sarah Hicks wrote: I am having trouble finding information on the MegaBLAST output columns. What is each column for? I can't seem to figure this out

Re: [galaxy-user] MegaBLAST output

2012-04-23 Thread Sarah Hicks
the correct match is the listed GI value minus 1 (ie, in NCBI, gi|324034994 is not 527nt long, but 324034993 IS 527nt long). On Mon, Apr 23, 2012 at 11:05 AM, Peter Cock p.j.a.c...@googlemail.com wrote: On Mon, Apr 23, 2012 at 5:56 PM, Sarah Hicks garlicsc...@gmail.com wrote: I am having trouble