is email.
We would be happy to help add it to Galaxy if this would be of interest to
you or other Galaxy users.
If there is any way we can be of assistance, please let us know!
Very best wishes,
Ann Loraine
On 2/21/11 3:39 PM, "Ying Zhang" wrote:
Hi:
I am using tophat in galaxy to a
have limited experience in computing so I do not know how
to format
this file.
Best
Ying
Quoting vasu punj :
I believe you need to format the Ensemble file Chromosome columns is
not correct.
Vasu
--- On Tue, 3/1/11, Ying Zhang wrote:
From: Ying Zhang
Subject: Re: [galaxy-user] how to
s CUFF ID? Thank you very much!
Best
Ying Zhang, M.D., Ph.D.
Postdoctoral Associate
Department of Genetics,
Yale University School of Medicine
300 Cedar Street,S320
New Haven, CT 06519
Tel: (203)737-2616
Fax: (203)737-2286
___
The Galaxy User list should b
Ying Zhang, M.D., Ph.D.
Postdoctoral Associate
Department of Genetics,
Yale University School of Medicine
300 Cedar Street,S320
New Haven, CT 06519
Tel: (203)737-2616
Fax: (203)737-2286
___
The Galaxy User list should be used for the discussion
of Galaxy
Ying Zhang, M.D., Ph.D.
Postdoctoral Associate
Department of Genetics,
Yale University School of Medicine
300 Cedar Street,S320
New Haven, CT 06519
Tel: (203)737-2616
Fax: (203)737-2286
___
The Galaxy User list should be used for the discussion
of Galaxy
lot!
Best
Ying Zhang, M.D., Ph.D.
Postdoctoral Associate
Department of Genetics,
Yale University School of Medicine
300 Cedar Street,S320
New Haven, CT 06519
Tel: (203)737-2616
Fax: (203)737-2286
___
The Galaxy User list should be used for the discussion
for one sample, but when do tophat
analysis, do I need to merge those two files into one file? do you know what is
the usual parameter set up for paried-end RNA-seq analysis(with a 300 bp
fragment)? Thank you very much! I really appreciate your help!
Best
Ying Zhang, M.D., Ph.D.
Postdoctoral
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