I dont think Cistrome can provide sufficient visualization options. In CEAS
analysis it can provide overall picture of genome binding regions or some
relative binding histograms. I beleive what Monica is asking when one has
chip enriched regions how to visualize such selected regions- I will
sugges
I think closest to what you want to do in galaxy can be done in cistrome
http://wiki.g2.bx.psu.edu/Community/Cistrome
Unless I am missing some galaxy tool in testing, which other galaxy users
more closely following galaxy test can comment on
best
Abhay
2011/11/16 Mónica Pérez Alegre
> **
>
Hi all
We are working with chip-chip data of S. cerevisiae (from Affymetrix) and
actually we have two problems and we don´t know if it´s possible to perform in
Galaxy:
1. We use the tool intersect to get the annotation of positive genomic
regions in our file bed. After, we need calculate st
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