Great :)
Don't forget to CC the mailing list in future ;)
On Fri, Feb 25, 2011 at 4:46 PM, Amy Boddy abo...@med.wayne.edu wrote:
Thank you, these articles helped!
On Thu, Feb 24, 2011 at 5:47 PM, Peter Cock p.j.a.c...@googlemail.com
wrote:
On Thu, Feb 24, 2011 at 8:47 PM, Amy Boddy
Dear Everyone:
I have got one output file after I run Cufflink which contain gene expression
information. However, I found out for each gene_ID, it has the format like,
CUFF.1151175, do you have idea of how to find out the offical gene ID
correspond to this CUFF ID? Thank you very much!
Best
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On Mon, Feb 28, 2011 at 9:28 PM, Yang Liu ywl5...@psu.edu wrote:
Is there any tool in Galaxy for trimming the Barcode
in 454 sequencing data? Thanks.
Hi,
The Roche off instrument applications cover this (working
directly with the SFF files). Try asking Edward Kkirton if he
would update his
Hi,
You need to supply a gene annotation file with cufflink to easily get the
gene-id information. Without it, cufflinks simply tries its best to figure out
what genes are present. The ensemble gtf file is quite a comprehensive one -
there is a link to it on the cufflinks manual page.
Good
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